Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5979
Gene name
Locationscaffold_501:13763..14685
Strand-
Gene length (bp)922
Transcript length (bp)810
Coding sequence length (bp)807
Protein length (aa) 269

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 213 235 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5979
MRVSASAVIAALPLLASALDDPLAPYKAQLQTVLNRVVSAIPNPGFHDPIAALEAKMGSMRMSTLTLENWKKTLY
EPVKPGATVPEEWWVLITGRNKTCYGHCGKVEKAFNETAAEFALTPGSPHMGYLNCDDQPILCNSWAAATANIWR
FAMLPAPAPVEVHKSKLNLTTTTPVKIAALREPEHKDDWVLVDSWFHPFHGKATELGLSIPYGYTLWAFNLVPNW
LFMVIVSFASRRMMSNRMQNMGNQGRRPGAAAGAGAGAAAAARN
Coding >Ophio5|5979
ATGCGCGTCTCTGCTTCCGCCGTCATCGCGGCTCTTCCGCTGCTCGCCTCCGCCCTAGACGACCCCCTGGCCCCG
TACAAGGCACAGCTGCAGACAGTGCTCAACCGCGTCGTCTCCGCTATCCCCAATCCCGGATTTCATGACCCCATC
GCCGCGCTCGAGGCCAAGATGGGCTCCATGAGGATGTCCACCCTGACGCTCGAGAACTGGAAGAAGACGCTCTAC
GAGCCCGTCAAGCCCGGTGCCACCGTCCCGGAGGAGTGGTGGGTCCTGATCACGGGCCGGAACAAGACGTGCTAC
GGCCACTGCGGCAAGGTGGAAAAGGCTTTCAACGAGACGGCCGCCGAGTTCGCCCTAACCCCCGGCTCCCCACAC
ATGGGCTACCTCAACTGCGATGACCAGCCCATCTTGTGCAACAGCTGGGCCGCCGCCACGGCCAATATCTGGCGT
TTTGCCATGCTTCCGGCCCCCGCCCCCGTCGAGGTCCACAAGTCCAAACTCAACCTCACCACCACCACGCCGGTC
AAGATTGCCGCTCTGCGGGAGCCCGAGCACAAGGACGACTGGGTTCTTGTCGACTCCTGGTTCCACCCCTTCCAT
GGAAAGGCCACCGAGCTCGGCTTGTCGATCCCCTACGGATACACGTTGTGGGCCTTCAACCTCGTCCCCAACTGG
CTATTCATGGTCATTGTGTCCTTTGCCAGCCGGCGCATGATGTCCAACCGCATGCAAAATATGGGCAACCAAGGG
CGTCGCCCTGGCGCTGCAGCTGGAGCCGGAGCTGGTGCCGCAGCCGCAGCACGAAAC
Transcript >Ophio5|5979
ATGCGCGTCTCTGCTTCCGCCGTCATCGCGGCTCTTCCGCTGCTCGCCTCCGCCCTAGACGACCCCCTGGCCCCG
TACAAGGCACAGCTGCAGACAGTGCTCAACCGCGTCGTCTCCGCTATCCCCAATCCCGGATTTCATGACCCCATC
GCCGCGCTCGAGGCCAAGATGGGCTCCATGAGGATGTCCACCCTGACGCTCGAGAACTGGAAGAAGACGCTCTAC
GAGCCCGTCAAGCCCGGTGCCACCGTCCCGGAGGAGTGGTGGGTCCTGATCACGGGCCGGAACAAGACGTGCTAC
GGCCACTGCGGCAAGGTGGAAAAGGCTTTCAACGAGACGGCCGCCGAGTTCGCCCTAACCCCCGGCTCCCCACAC
ATGGGCTACCTCAACTGCGATGACCAGCCCATCTTGTGCAACAGCTGGGCCGCCGCCACGGCCAATATCTGGCGT
TTTGCCATGCTTCCGGCCCCCGCCCCCGTCGAGGTCCACAAGTCCAAACTCAACCTCACCACCACCACGCCGGTC
AAGATTGCCGCTCTGCGGGAGCCCGAGCACAAGGACGACTGGGTTCTTGTCGACTCCTGGTTCCACCCCTTCCAT
GGAAAGGCCACCGAGCTCGGCTTGTCGATCCCCTACGGATACACGTTGTGGGCCTTCAACCTCGTCCCCAACTGG
CTATTCATGGTCATTGTGTCCTTTGCCAGCCGGCGCATGATGTCCAACCGCATGCAAAATATGGGCAACCAAGGG
CGTCGCCCTGGCGCTGCAGCTGGAGCCGGAGCTGGTGCCGCAGCCGCAGCACGAAACTGA
Gene >Ophio5|5979
ATGCGCGTCTCTGCTTCCGCCGTCATCGCGGCTCTTCCGCTGCTCGCCTCCGCCCTAGACGACCCCCTGGCCCCG
TACAAGGCACAGCTGCAGACAGTGCTCAACCGCGTCGTCTCCGCTATCCCCAATCCCGGATTTCATGACCCCATC
GCCGCGCTCGAGGCCAAGATGGGCTCCATGAGGATGTCCACCCTGACGCTCGAGAACTGGAAGAAGACGCTCTAC
GAGCCCGTCAAGCCCGGTGCCACCGTCCCGGAGGAGTGGTGGGTCCTGATCACGGGCCGGAACAAGACGTGCTAC
GGTAAGACTCGAATGAACAGACGTCAAGGGTACCACATGTTGACGTGACCCAAAGGCCACTGCGGCAAGGTGGAA
AAGGCTTTCAACGAGACGGCCGCCGAGTTCGCCCTAACCCCCGGCTCCCCACACATGGGCTACCTCAACTGCGAT
GACCAGCCCATCTTGTGCAACAGCTGGGCCGCCGCCACGGCCAATATCTGGCGTTTTGCCATGCTTCCGGCCCCC
GCCCCCGTCGAGGTCCACAAGTCCAAACTCAACCTCACCACCACCACGCCGGTCAAGATTGCCGCTCTGCGGGAG
CCCGAGCACAAGGACGACTGGGTTCTTGTCGACTCCTGGTTCCACCCCTTCCATGGAAAGGCCACCGAGCTCGGC
TTGTCGATCCCCTACGGATACACGTTGTGGGCCTTCAACCTCGTCCCCAACTGGCTATTCATGGTCATTGTGTCC
TTTGCCAGCCGGCGCATGATGTGAGCCGAATGCGTGGCCGATATATCCATGCCTGTGTGTGCCCGCTGACAGGTC
CAGGTCCAACCGCATGCAAAATATGGGCAACCAAGGGCGTCGCCCTGGCGCTGCAGCTGGAGCCGGAGCTGGTGC
CGCAGCCGCAGCACGAAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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