Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|596
Gene name
Location	scaffold_116:6897..8297
Strand	-
Gene length (bp)	1400
Transcript length (bp)	1347
Coding sequence length (bp)	1344
Protein length (aa)	448

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00487	FA_desaturase	Fatty acid desaturase	2.6E-16	168	382

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0006629	lipid metabolic process	Yes
GO:0071704	organic substance metabolic process	No
GO:0044238	primary metabolic process	No
GO:0008152	metabolic process	No
GO:0008150	biological_process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	128	147	19
2	152	174	22
3	246	265	19
4	280	302	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|596 MESQIFLDDALTVADKLVLKSLVEDIKEVGPLQDADDGTDRDSGIEVQSYTDGSDADLNGDEARRWNKTAQDIAM LKAMGDVQSDQFQPTVLLSVDDCSRHVPSAVSKYMLQPYIGLARKVARHQTDVVMITHLLLYLCTTVPSAFLLYR RFSLLHGLVHGTMQVYYMGTYTLMMHQHIHQRGILTKRLAVMDRLFPYLLDPLMGHTWNSYYYHHVKHHHVENNG PEDLSTTIRYQRDSIRDFARYVGRFFFLVWLDLPLYFVQTKRPGVAMQAGGWEILTYVFYLTMAAHSAKATFFVY MVPLFLMRLCLMVGNWGQHAFVDSEEPDSDFRSSITLIDVASNRFCFNDGYHTSHHLNPLRHWRHHPISFLEQKQ TYAKEGALVFHDIDFLMVTFSLLRKDYERLARCMVPMGDQVGLSVQGRIALLKRLTTRFSEEEIRDKFRQKMT
Coding	>Ophio5\|596 ATGGAGAGCCAGATATTCCTAGACGACGCCTTGACTGTCGCTGACAAACTGGTTCTGAAGAGCCTCGTCGAGGAC ATCAAGGAGGTTGGGCCTCTTCAGGATGCCGACGATGGCACGGATCGCGACTCTGGGATCGAAGTTCAGTCTTAC ACAGACGGATCTGACGCAGACTTGAATGGTGATGAAGCCAGGAGATGGAACAAGACAGCCCAGGATATTGCCATG CTCAAAGCCATGGGAGATGTTCAGAGCGACCAGTTCCAGCCGACGGTGCTTCTGTCAGTCGACGATTGCTCTCGC CACGTTCCGTCAGCCGTCAGCAAGTACATGCTGCAGCCGTACATCGGCCTGGCTCGAAAGGTGGCTCGTCACCAG ACTGATGTTGTCATGATCACTCACTTGCTGCTCTATCTCTGCACAACAGTCCCGAGCGCGTTTCTCCTCTACCGG CGCTTCAGCTTGTTGCACGGGCTGGTTCATGGCACGATGCAGGTCTATTATATGGGCACCTACACGCTCATGATG CACCAGCACATTCACCAGCGAGGCATTCTAACCAAGAGACTGGCCGTCATGGACAGGCTGTTTCCGTATCTGCTC GACCCTCTGATGGGCCACACTTGGAACTCGTACTACTACCATCACGTCAAGCATCACCACGTTGAGAACAACGGA CCCGAAGACCTTTCGACGACGATTCGTTATCAGCGGGACAGCATTCGCGACTTTGCCCGCTACGTGGGACGCTTC TTCTTTCTCGTCTGGCTCGACTTACCCCTGTACTTTGTCCAGACGAAGCGGCCGGGCGTGGCGATGCAAGCCGGC GGATGGGAGATTCTCACCTACGTCTTTTATCTGACCATGGCAGCACATTCTGCAAAGGCCACCTTTTTCGTCTAC ATGGTTCCCTTGTTCCTGATGCGTCTATGTCTGATGGTAGGAAACTGGGGGCAACACGCCTTTGTGGATTCGGAA GAGCCGGACTCGGACTTTCGCTCCAGCATCACGCTGATTGACGTGGCGAGCAATCGATTCTGCTTCAACGACGGC TATCACACGTCGCATCACCTGAATCCGCTCCGACACTGGCGCCATCACCCAATTTCGTTTCTCGAGCAGAAGCAG ACGTATGCCAAGGAGGGCGCTCTCGTCTTCCATGATATCGACTTTCTCATGGTGACGTTCAGCCTGCTGCGAAAG GATTACGAGCGTCTGGCGAGGTGCATGGTGCCCATGGGCGACCAGGTCGGCCTCAGCGTTCAAGGCCGGATCGCG TTGCTGAAGAGGTTGACGACGAGGTTTAGCGAGGAGGAGATTCGGGACAAGTTCCGGCAGAAGATGACC
Transcript	>Ophio5\|596 ATGGAGAGCCAGATATTCCTAGACGACGCCTTGACTGTCGCTGACAAACTGGTTCTGAAGAGCCTCGTCGAGGAC ATCAAGGAGGTTGGGCCTCTTCAGGATGCCGACGATGGCACGGATCGCGACTCTGGGATCGAAGTTCAGTCTTAC ACAGACGGATCTGACGCAGACTTGAATGGTGATGAAGCCAGGAGATGGAACAAGACAGCCCAGGATATTGCCATG CTCAAAGCCATGGGAGATGTTCAGAGCGACCAGTTCCAGCCGACGGTGCTTCTGTCAGTCGACGATTGCTCTCGC CACGTTCCGTCAGCCGTCAGCAAGTACATGCTGCAGCCGTACATCGGCCTGGCTCGAAAGGTGGCTCGTCACCAG ACTGATGTTGTCATGATCACTCACTTGCTGCTCTATCTCTGCACAACAGTCCCGAGCGCGTTTCTCCTCTACCGG CGCTTCAGCTTGTTGCACGGGCTGGTTCATGGCACGATGCAGGTCTATTATATGGGCACCTACACGCTCATGATG CACCAGCACATTCACCAGCGAGGCATTCTAACCAAGAGACTGGCCGTCATGGACAGGCTGTTTCCGTATCTGCTC GACCCTCTGATGGGCCACACTTGGAACTCGTACTACTACCATCACGTCAAGCATCACCACGTTGAGAACAACGGA CCCGAAGACCTTTCGACGACGATTCGTTATCAGCGGGACAGCATTCGCGACTTTGCCCGCTACGTGGGACGCTTC TTCTTTCTCGTCTGGCTCGACTTACCCCTGTACTTTGTCCAGACGAAGCGGCCGGGCGTGGCGATGCAAGCCGGC GGATGGGAGATTCTCACCTACGTCTTTTATCTGACCATGGCAGCACATTCTGCAAAGGCCACCTTTTTCGTCTAC ATGGTTCCCTTGTTCCTGATGCGTCTATGTCTGATGGTAGGAAACTGGGGGCAACACGCCTTTGTGGATTCGGAA GAGCCGGACTCGGACTTTCGCTCCAGCATCACGCTGATTGACGTGGCGAGCAATCGATTCTGCTTCAACGACGGC TATCACACGTCGCATCACCTGAATCCGCTCCGACACTGGCGCCATCACCCAATTTCGTTTCTCGAGCAGAAGCAG ACGTATGCCAAGGAGGGCGCTCTCGTCTTCCATGATATCGACTTTCTCATGGTGACGTTCAGCCTGCTGCGAAAG GATTACGAGCGTCTGGCGAGGTGCATGGTGCCCATGGGCGACCAGGTCGGCCTCAGCGTTCAAGGCCGGATCGCG TTGCTGAAGAGGTTGACGACGAGGTTTAGCGAGGAGGAGATTCGGGACAAGTTCCGGCAGAAGATGACCTGA
Gene	>Ophio5\|596 ATGGAGAGCCAGATATTCCTAGACGACGCCTTGACTGTCGCTGACAAACTGGTTCTGAAGAGCCTCGTCGAGGAC ATCAAGGAGGTTGGGCCTCTTCAGGATGCCGACGATGGCACGGATCGCGACTCTGGGATCGAAGTTCAGTCTTAC ACAGACGGATCTGACGCAGACTTGAATGGTGATGAAGCCAGGAGATGGAACAAGACAGCCCAGGATATTGCCATG CTCAAAGCCATGGGAGATGTTCAGAGCGACCAGTTCCAGCCGACGGTGCTTCTGTCAGTCGACGATTGCTCTCGC CACGTTCCGTCAGCCGTCAGCAAGTACATGCTGCAGCCGTACATCGGCCTGGCTCGAAAGGTGGCTCGTCACCAG ACTGATGTTGTCATGATCACTCACTTGCTGCTCTATCTCTGCACAACAGTCCCGAGCGCGTTTCTCCTCTACCGG CGCTTCAGCTTGTTGCACGGGCTGGTTCATGGCACGATGCAGGTCTATTATATGGGCACCTACACGCTCATGATG CACCAGCACATTCACCAGCGAGGCATTCTAACCAAGAGACTGGCCGTCATGGACAGGCTGTTTCCGTATCTGCTC GACCCTCTGATGGGCCACACTTGGAACTCGTACTACTACCATCACGTCAAGCATCACCACGTTGAGAACAACGGA CCCGAAGACCTTTCGACGACGATTCGTTATCAGCGGGACAGCATTCGCGACTTTGCCCGCTACGTGGGACGCTTC TTCTTTCTCGTCTGGCTCGACTTACCCCTGTACTTTGTCCAGACGAAGCGGCCGGGCGTGGCGATGCAAGCCGGC GGATGGGAGATTCTCACCTACGTCTTTTATCTGACCATGGCAGCACATTCTGCAAAGGCCACCTTTTTCGTCTAC ATGGTTCCCTTGTTCCTGATGCGTCTATGTCTGATGGTAGGAAACTGGGGGCAACACGCCTTTGTGGATTCGGAA GAGCCGGACTCGGACTTTCGCTCCAGCATCACGCTGATTGACGTGGCGGTGAGAGCAAGAACGCGAAGGCTGCGA GTCTCAAAGCTGATCAGATGTCGCAGAGCAATCGATTCTGCTTCAACGACGGCTATCACACGTCGCATCACCTGA ATCCGCTCCGACACTGGCGCCATCACCCAATTTCGTTTCTCGAGCAGAAGCAGACGTATGCCAAGGAGGGCGCTC TCGTCTTCCATGATATCGACTTTCTCATGGTGACGTTCAGCCTGCTGCGAAAGGATTACGAGCGTCTGGCGAGGT GCATGGTGCCCATGGGCGACCAGGTCGGCCTCAGCGTTCAAGGCCGGATCGCGTTGCTGAAGAGGTTGACGACGA GGTTTAGCGAGGAGGAGATTCGGGACAAGTTCCGGCAGAAGATGACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail