Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5938
Gene name
Locationscaffold_5:110195..110855
Strand-
Gene length (bp)660
Transcript length (bp)660
Coding sequence length (bp)657
Protein length (aa) 219

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5938
MLLFLPVSASLSLSLTLSHTLSLSSSSYPPRSSSSAPHRTTSPTPDHGSKSRLFLPDADTPIHSWTRRPPPPPPL
RLHRRLGESCASLVCLLSPLLFQALPTSPSLPPPQRVPPQVDGATSIASAVVSHCKPQLKRQIKEPQPHFAASAS
QTTWGNPLFQKKKKTALAPTPGSKRQTGSGERVRERDDTKRMAPTRLKRPASRVLARQFLSASARGRLG
Coding >Ophio5|5938
ATGCTCCTCTTCCTCCCTGTCTCTGCCTCTCTCTCACTCTCTCTCACTCTCTCTCACACACTCTCTCTCTCCTCT
TCATCCTATCCTCCACGCAGCTCCTCCTCGGCTCCGCACCGTACAACTTCGCCTACGCCAGATCACGGCTCAAAA
AGCCGTCTCTTCCTCCCAGACGCAGACACACCCATCCACAGCTGGACTCGGCGCCCCCCCCCCCCCCCCCCGTTG
AGGCTTCATCGCCGCCTCGGCGAGTCCTGTGCGAGTCTCGTCTGTCTCCTCTCCCCCCTTCTGTTCCAAGCTCTT
CCGACGTCGCCATCTCTTCCCCCCCCCCAACGCGTGCCACCCCAAGTCGACGGCGCCACTTCGATAGCCTCGGCC
GTCGTGTCACACTGCAAACCGCAGCTCAAGCGACAAATTAAGGAGCCTCAGCCACATTTCGCCGCTTCTGCGTCT
CAGACCACTTGGGGAAATCCTCTCTTCCAAAAAAAAAAAAAAACCGCCCTCGCTCCCACCCCCGGCAGCAAGCGT
CAGACCGGCAGCGGAGAGAGAGTGAGAGAGAGAGACGACACGAAACGCATGGCGCCGACACGGCTCAAGCGACCT
GCCTCTCGCGTGCTGGCTCGTCAATTTCTCTCCGCCTCGGCCAGGGGTCGCTTGGGG
Transcript >Ophio5|5938
ATGCTCCTCTTCCTCCCTGTCTCTGCCTCTCTCTCACTCTCTCTCACTCTCTCTCACACACTCTCTCTCTCCTCT
TCATCCTATCCTCCACGCAGCTCCTCCTCGGCTCCGCACCGTACAACTTCGCCTACGCCAGATCACGGCTCAAAA
AGCCGTCTCTTCCTCCCAGACGCAGACACACCCATCCACAGCTGGACTCGGCGCCCCCCCCCCCCCCCCCCGTTG
AGGCTTCATCGCCGCCTCGGCGAGTCCTGTGCGAGTCTCGTCTGTCTCCTCTCCCCCCTTCTGTTCCAAGCTCTT
CCGACGTCGCCATCTCTTCCCCCCCCCCAACGCGTGCCACCCCAAGTCGACGGCGCCACTTCGATAGCCTCGGCC
GTCGTGTCACACTGCAAACCGCAGCTCAAGCGACAAATTAAGGAGCCTCAGCCACATTTCGCCGCTTCTGCGTCT
CAGACCACTTGGGGAAATCCTCTCTTCCAAAAAAAAAAAAAAACCGCCCTCGCTCCCACCCCCGGCAGCAAGCGT
CAGACCGGCAGCGGAGAGAGAGTGAGAGAGAGAGACGACACGAAACGCATGGCGCCGACACGGCTCAAGCGACCT
GCCTCTCGCGTGCTGGCTCGTCAATTTCTCTCCGCCTCGGCCAGGGGTCGCTTGGGGTGA
Gene >Ophio5|5938
ATGCTCCTCTTCCTCCCTGTCTCTGCCTCTCTCTCACTCTCTCTCACTCTCTCTCACACACTCTCTCTCTCCTCT
TCATCCTATCCTCCACGCAGCTCCTCCTCGGCTCCGCACCGTACAACTTCGCCTACGCCAGATCACGGCTCAAAA
AGCCGTCTCTTCCTCCCAGACGCAGACACACCCATCCACAGCTGGACTCGGCGCCCCCCCCCCCCCCCCCCGTTG
AGGCTTCATCGCCGCCTCGGCGAGTCCTGTGCGAGTCTCGTCTGTCTCCTCTCCCCCCTTCTGTTCCAAGCTCTT
CCGACGTCGCCATCTCTTCCCCCCCCCCAACGCGTGCCACCCCAAGTCGACGGCGCCACTTCGATAGCCTCGGCC
GTCGTGTCACACTGCAAACCGCAGCTCAAGCGACAAATTAAGGAGCCTCAGCCACATTTCGCCGCTTCTGCGTCT
CAGACCACTTGGGGAAATCCTCTCTTCCAAAAAAAAAAAAAAACCGCCCTCGCTCCCACCCCCGGCAGCAAGCGT
CAGACCGGCAGCGGAGAGAGAGTGAGAGAGAGAGACGACACGAAACGCATGGCGCCGACACGGCTCAAGCGACCT
GCCTCTCGCGTGCTGGCTCGTCAATTTCTCTCCGCCTCGGCCAGGGGTCGCTTGGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail