Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5924
Gene name
Locationscaffold_5:69456..70233
Strand-
Gene length (bp)777
Transcript length (bp)777
Coding sequence length (bp)774
Protein length (aa) 258

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5924
MKVLLAALSILASTASAVTPLRRLHFPRTNGTAYADVGLSRVTPSTPLMTGTSPSSDGYDSPDRESAPANDDDET
VTATMTSVIHKTSTSYVHGTATPTVEAEVKAALPGDATSNSNGSGGNSNSSSSSSNGSSSDNSLSTTTVTSKTFT
TVTISRGAGAARNSGAATENCAPSTVTVTQPPVTQTVFVTATAEPVQASSERVPVLDKDVSSFHKQAYAQPPITV
QSVVTVMPFPTGYNGSHASGAARPTGFARLYRS
Coding >Ophio5|5924
ATGAAGGTCCTTCTTGCCGCCCTGAGCATCCTGGCCTCTACCGCCTCGGCCGTCACCCCTCTTCGTCGCCTTCAC
TTCCCGCGCACCAACGGAACGGCCTACGCAGATGTCGGCCTCTCCAGGGTCACGCCGAGCACGCCCCTGATGACG
GGCACCTCTCCGTCCTCAGATGGCTATGACTCCCCTGACAGGGAGTCTGCTCCCGCAAATGACGACGATGAGACG
GTAACGGCTACCATGACGTCCGTCATCCACAAGACGAGCACCAGCTACGTCCACGGCACGGCTACACCCACCGTC
GAAGCAGAAGTCAAGGCCGCCTTGCCCGGAGACGCCACGAGCAACAGCAACGGCAGCGGCGGCAACAGCAACAGC
AGCAGCAGCAGCAGCAACGGCAGCAGCAGCGACAACTCCCTGTCAACCACGACCGTCACTTCCAAGACATTCACC
ACCGTAACCATCTCCCGCGGCGCCGGCGCCGCTCGCAACTCGGGTGCAGCAACGGAAAACTGCGCTCCCTCGACC
GTCACAGTCACCCAACCCCCGGTCACTCAGACCGTCTTCGTCACCGCCACGGCCGAGCCCGTCCAGGCCAGCAGC
GAGCGGGTGCCCGTCTTGGACAAGGACGTCTCCAGCTTCCACAAGCAAGCCTACGCTCAGCCTCCGATTACGGTC
CAGTCCGTCGTCACCGTCATGCCTTTCCCTACCGGCTACAACGGCTCTCATGCTTCCGGGGCCGCTCGGCCCACC
GGCTTCGCTCGTCTGTATCGGTCT
Transcript >Ophio5|5924
ATGAAGGTCCTTCTTGCCGCCCTGAGCATCCTGGCCTCTACCGCCTCGGCCGTCACCCCTCTTCGTCGCCTTCAC
TTCCCGCGCACCAACGGAACGGCCTACGCAGATGTCGGCCTCTCCAGGGTCACGCCGAGCACGCCCCTGATGACG
GGCACCTCTCCGTCCTCAGATGGCTATGACTCCCCTGACAGGGAGTCTGCTCCCGCAAATGACGACGATGAGACG
GTAACGGCTACCATGACGTCCGTCATCCACAAGACGAGCACCAGCTACGTCCACGGCACGGCTACACCCACCGTC
GAAGCAGAAGTCAAGGCCGCCTTGCCCGGAGACGCCACGAGCAACAGCAACGGCAGCGGCGGCAACAGCAACAGC
AGCAGCAGCAGCAGCAACGGCAGCAGCAGCGACAACTCCCTGTCAACCACGACCGTCACTTCCAAGACATTCACC
ACCGTAACCATCTCCCGCGGCGCCGGCGCCGCTCGCAACTCGGGTGCAGCAACGGAAAACTGCGCTCCCTCGACC
GTCACAGTCACCCAACCCCCGGTCACTCAGACCGTCTTCGTCACCGCCACGGCCGAGCCCGTCCAGGCCAGCAGC
GAGCGGGTGCCCGTCTTGGACAAGGACGTCTCCAGCTTCCACAAGCAAGCCTACGCTCAGCCTCCGATTACGGTC
CAGTCCGTCGTCACCGTCATGCCTTTCCCTACCGGCTACAACGGCTCTCATGCTTCCGGGGCCGCTCGGCCCACC
GGCTTCGCTCGTCTGTATCGGTCTTGA
Gene >Ophio5|5924
ATGAAGGTCCTTCTTGCCGCCCTGAGCATCCTGGCCTCTACCGCCTCGGCCGTCACCCCTCTTCGTCGCCTTCAC
TTCCCGCGCACCAACGGAACGGCCTACGCAGATGTCGGCCTCTCCAGGGTCACGCCGAGCACGCCCCTGATGACG
GGCACCTCTCCGTCCTCAGATGGCTATGACTCCCCTGACAGGGAGTCTGCTCCCGCAAATGACGACGATGAGACG
GTAACGGCTACCATGACGTCCGTCATCCACAAGACGAGCACCAGCTACGTCCACGGCACGGCTACACCCACCGTC
GAAGCAGAAGTCAAGGCCGCCTTGCCCGGAGACGCCACGAGCAACAGCAACGGCAGCGGCGGCAACAGCAACAGC
AGCAGCAGCAGCAGCAACGGCAGCAGCAGCGACAACTCCCTGTCAACCACGACCGTCACTTCCAAGACATTCACC
ACCGTAACCATCTCCCGCGGCGCCGGCGCCGCTCGCAACTCGGGTGCAGCAACGGAAAACTGCGCTCCCTCGACC
GTCACAGTCACCCAACCCCCGGTCACTCAGACCGTCTTCGTCACCGCCACGGCCGAGCCCGTCCAGGCCAGCAGC
GAGCGGGTGCCCGTCTTGGACAAGGACGTCTCCAGCTTCCACAAGCAAGCCTACGCTCAGCCTCCGATTACGGTC
CAGTCCGTCGTCACCGTCATGCCTTTCCCTACCGGCTACAACGGCTCTCATGCTTCCGGGGCCGCTCGGCCCACC
GGCTTCGCTCGTCTGTATCGGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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