Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|59
Gene name
Locationscaffold_1:145530..146750
Strand-
Gene length (bp)1220
Transcript length (bp)1155
Coding sequence length (bp)1152
Protein length (aa) 384

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14610 Psg1 Ykl077w/Psg1 (Pma1 Stabilization in Golgi) 3.8E-35 119 295

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 266 288 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|59
MKTSGASALFASLALAGLCVAMPSPTPTAVPLLVRRGEDELTVSEEDYTTVAPTAPWVTVDDEGQPAMTVTPSIN
TISGTTTVEHGAPHDLTASVYTWITWGAITTSTGTPPNPTAVDGKTGQGAFSRCFNRDDQELAPFCRPLANSTLL
TGTTYYVTWDPDFYKNAASDNTTTLEVAVRLDFLNQSSNEWAKLDTYDRVPAKWGFWPLRLRTEHLKGQRYNNAT
ITLVVSPRGGDERNKSVALPVTLTSLGVDDMPPPRVPKGSTLLIALPVSLASFFLVLIGLYLWHRQTRTINLGNI
MGRSRHGYNGRRHRRHRFLASARHRQQQQQQQQQQPHPQEEPRVPLNTVATEFRDLPSPTEDPDVVGGLQREKMK
LYGAKGPRR
Coding >Ophio5|59
ATGAAGACCAGCGGCGCGTCCGCCCTCTTCGCCAGCTTGGCCCTCGCCGGTCTCTGCGTCGCCATGCCCTCTCCC
ACGCCTACAGCAGTCCCCCTACTCGTCCGTCGGGGAGAGGACGAATTGACGGTCTCGGAAGAAGACTATACCACC
GTCGCCCCGACTGCCCCCTGGGTCACCGTCGACGATGAGGGTCAACCTGCCATGACGGTCACGCCGTCGATCAAT
ACCATCAGCGGCACAACGACGGTCGAGCACGGCGCTCCGCACGACCTGACGGCCTCCGTCTATACTTGGATCACT
TGGGGCGCCATCACCACCAGCACCGGCACGCCTCCTAACCCAACCGCCGTCGACGGCAAGACGGGTCAGGGCGCC
TTTTCGCGTTGCTTCAACCGTGACGACCAAGAGCTCGCTCCTTTCTGCCGGCCATTGGCCAACTCGACACTTCTC
ACAGGCACAACCTACTACGTCACTTGGGATCCCGACTTCTACAAAAACGCCGCGTCGGACAACACCACCACCCTC
GAGGTAGCCGTCCGACTCGACTTCCTCAACCAAAGCAGCAACGAATGGGCCAAGCTCGACACCTACGACCGCGTC
CCCGCCAAATGGGGCTTCTGGCCCTTGCGCCTCCGGACGGAGCACCTCAAGGGCCAGCGCTACAACAACGCCACC
ATCACCCTCGTCGTCTCCCCTCGAGGCGGCGACGAGCGCAACAAGTCGGTCGCCCTCCCCGTCACCCTGACCAGC
CTCGGCGTCGACGACATGCCTCCCCCGCGTGTCCCCAAGGGTTCCACCCTCCTCATCGCCCTGCCCGTCTCCCTC
GCCTCCTTTTTCCTCGTCCTCATCGGCTTGTACCTCTGGCATCGTCAGACGCGTACCATCAACCTCGGCAACATC
ATGGGCCGCTCTCGTCACGGTTATAACGGCCGTCGTCACCGCCGTCACCGTTTCCTCGCTTCCGCTCGCCACCGC
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCATCCCCAGGAAGAGCCCCGCGTGCCGCTCAACACCGTCGCC
ACCGAATTCCGCGACTTGCCCTCCCCGACCGAGGACCCAGACGTCGTCGGTGGTCTGCAGCGCGAAAAGATGAAG
CTCTACGGCGCAAAGGGTCCGAGACGG
Transcript >Ophio5|59
ATGAAGACCAGCGGCGCGTCCGCCCTCTTCGCCAGCTTGGCCCTCGCCGGTCTCTGCGTCGCCATGCCCTCTCCC
ACGCCTACAGCAGTCCCCCTACTCGTCCGTCGGGGAGAGGACGAATTGACGGTCTCGGAAGAAGACTATACCACC
GTCGCCCCGACTGCCCCCTGGGTCACCGTCGACGATGAGGGTCAACCTGCCATGACGGTCACGCCGTCGATCAAT
ACCATCAGCGGCACAACGACGGTCGAGCACGGCGCTCCGCACGACCTGACGGCCTCCGTCTATACTTGGATCACT
TGGGGCGCCATCACCACCAGCACCGGCACGCCTCCTAACCCAACCGCCGTCGACGGCAAGACGGGTCAGGGCGCC
TTTTCGCGTTGCTTCAACCGTGACGACCAAGAGCTCGCTCCTTTCTGCCGGCCATTGGCCAACTCGACACTTCTC
ACAGGCACAACCTACTACGTCACTTGGGATCCCGACTTCTACAAAAACGCCGCGTCGGACAACACCACCACCCTC
GAGGTAGCCGTCCGACTCGACTTCCTCAACCAAAGCAGCAACGAATGGGCCAAGCTCGACACCTACGACCGCGTC
CCCGCCAAATGGGGCTTCTGGCCCTTGCGCCTCCGGACGGAGCACCTCAAGGGCCAGCGCTACAACAACGCCACC
ATCACCCTCGTCGTCTCCCCTCGAGGCGGCGACGAGCGCAACAAGTCGGTCGCCCTCCCCGTCACCCTGACCAGC
CTCGGCGTCGACGACATGCCTCCCCCGCGTGTCCCCAAGGGTTCCACCCTCCTCATCGCCCTGCCCGTCTCCCTC
GCCTCCTTTTTCCTCGTCCTCATCGGCTTGTACCTCTGGCATCGTCAGACGCGTACCATCAACCTCGGCAACATC
ATGGGCCGCTCTCGTCACGGTTATAACGGCCGTCGTCACCGCCGTCACCGTTTCCTCGCTTCCGCTCGCCACCGC
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCATCCCCAGGAAGAGCCCCGCGTGCCGCTCAACACCGTCGCC
ACCGAATTCCGCGACTTGCCCTCCCCGACCGAGGACCCAGACGTCGTCGGTGGTCTGCAGCGCGAAAAGATGAAG
CTCTACGGCGCAAAGGGTCCGAGACGGTAA
Gene >Ophio5|59
ATGAAGACCAGCGGCGCGTCCGCCCTCTTCGCCAGCTTGGCCCTCGCCGGTCTCTGCGTCGCCATGCCCTCTCCC
ACGCCTACAGCAGTCCCCCTACTCGTCCGTCGGGGAGAGGACGAATTGACGGTCTCGGAAGAAGACTATACCACC
GTCGCCCCGACTGCCCCCTGGGTCACCGTCGACGATGAGGGTCAACCTGCCATGACGGTCACGCCGTCGATCAAT
ACCATCAGCGGCACAACGACGGTCGAGCACGGCGCTCCGCACGACCTGACGGCCTCCGTCTATACTTGGATCACT
TGGGGCGCCATCACCACCAGCACCGGCACGCCTCCTAACCCAACCGCCGTCGACGGCAAGACGGGTCAGGGCGCC
TTTTCGCGTTGCTTCAACCGTGACGACCAAGAGCTCGCTCCTTTCTGCCGGCCATTGGCCAACTCGACACTTCTC
ACAGGCACAACCTACTACGGTAATATATATATATAGGACCAACCTCCTTTTGATTCCCACCACTAACAAAACTCT
CCCCTCAAGTCACTTGGGATCCCGACTTCTACAAAAACGCCGCGTCGGACAACACCACCACCCTCGAGGTAGCCG
TCCGACTCGACTTCCTCAACCAAAGCAGCAACGAATGGGCCAAGCTCGACACCTACGACCGCGTCCCCGCCAAAT
GGGGCTTCTGGCCCTTGCGCCTCCGGACGGAGCACCTCAAGGGCCAGCGCTACAACAACGCCACCATCACCCTCG
TCGTCTCCCCTCGAGGCGGCGACGAGCGCAACAAGTCGGTCGCCCTCCCCGTCACCCTGACCAGCCTCGGCGTCG
ACGACATGCCTCCCCCGCGTGTCCCCAAGGGTTCCACCCTCCTCATCGCCCTGCCCGTCTCCCTCGCCTCCTTTT
TCCTCGTCCTCATCGGCTTGTACCTCTGGCATCGTCAGACGCGTACCATCAACCTCGGCAACATCATGGGCCGCT
CTCGTCACGGTTATAACGGCCGTCGTCACCGCCGTCACCGTTTCCTCGCTTCCGCTCGCCACCGCCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCCCCATCCCCAGGAAGAGCCCCGCGTGCCGCTCAACACCGTCGCCACCGAATTCC
GCGACTTGCCCTCCCCGACCGAGGACCCAGACGTCGTCGGTGGTCTGCAGCGCGAAAAGATGAAGCTCTACGGCG
CAAAGGGTCCGAGACGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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