Protein ID | Ophio5|5894 |
Gene name | |
Location | scaffold_498:8164..10900 |
Strand | + |
Gene length (bp) | 2736 |
Transcript length (bp) | 2682 |
Coding sequence length (bp) | 2679 |
Protein length (aa) | 893 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02141 | DENN | DENN (AEX-3) domain | 2.0E-40 | 197 | 378 |
PF03456 | uDENN | uDENN domain | 2.3E-10 | 101 | 165 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9Y7Q7|DENN_SCHPO | DENN domain-containing protein C297.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC297.05 PE=1 SV=1 | 193 | 404 | 5.0E-11 |
sp|Q7Z401|MYCPP_HUMAN | C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 | 127 | 380 | 3.0E-10 |
sp|Q8RXA7|SCD1_ARATH | DENN domain and WD repeat-containing protein SCD1 OS=Arabidopsis thaliana GN=SCD1 PE=1 SV=1 | 274 | 383 | 3.0E-07 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5894 MPPSLTRPRTGDREARPGTRDQGTNDNMLIPSRTSSLHSRITQPIPSILSAKPQQRTPKTLTHAYMVCGVGREPS QWVKAPPPPQGKISHMKGAVGQFWLPEILGSSPRLEQDNEVARALHAAMRACFPHDVEICTGRNQPHCVHHAFVL QQDSSHTLYGICLRVWSRADDKRAETIRDLRKRTESDFFDNPDETYWIPYCLSFLSRYPLYNLMGDYLRGMWIHW NKATNLFHAEEVSRILSFPAPRLNDLVRIDMKDYALCYQFPSSPTGFQNFALWPLFTCLSIPNIVGVIEAAISPT RRIVFVSHYPAMLTVAAETVRYCVRVYEWSGLYVPVVHARHAQELVQEPGPYILGITAECRSLFTAPNDALVVDL DRNFVLTSSPPTALTPGQRNKFVTRLTQALNGDVTPSGVPHHLRSSYGGGKLVPAGQIIVMRGEVESIEDPEWWN QDSVMAVMDHVCEKLGRNSGIKAVFGGSVKKPLMTKVSMRHLNEIVRERNQYSRDALEAWQDFINLKGRMDTELS KVNKRNNYLVEELESWKQQFLKFQAFAEQLTKETQDLKVKIEGHKREARRLTGLIDQQKDDNARLSVRLGGTEKQ RDDALEALVLQQEIAEELERERKRNQKELAHLHHTSSNRVRERDEARRVVLHLHSLISGQSHHMEHLIQSLTKPD GLAREIALAYEEGEEEEDEDEDEDEEGANLDSHAPADAAVRGSKRLSSPGFFDIADRHLKDKTDAIAHIVRNIAD QCQAAVEGLQLAQDAELRSLRRHSNLSALHSEDGIEEGSVATTEAGDDVRPLLGSGRASSIPPTPDLIPNRSSTA MSFASATTTPERSSQQFAAGGDIPTKIVEDDEEIYEESRSDNGVVAKPTETLLHRAPGARISALGGSR |
Coding | >Ophio5|5894 ATGCCTCCGTCCCTGACCCGCCCTCGGACCGGAGACCGCGAGGCTCGTCCCGGCACTCGCGATCAGGGCACCAAC GACAACATGCTCATCCCGAGCCGCACCTCGTCGCTGCACTCGCGAATCACCCAGCCTATCCCTTCCATCCTTTCC GCCAAGCCCCAGCAGCGCACTCCCAAGACGCTCACTCATGCCTACATGGTCTGTGGCGTCGGCCGCGAGCCTTCG CAATGGGTCAAAGCCCCTCCCCCGCCACAGGGTAAGATCAGCCACATGAAGGGCGCCGTCGGCCAATTCTGGCTG CCCGAGATCCTCGGTAGCAGCCCTCGCCTCGAGCAGGATAATGAGGTGGCCCGCGCCCTGCACGCTGCCATGAGG GCCTGCTTCCCCCACGATGTCGAGATTTGTACGGGCCGGAACCAGCCGCACTGCGTTCATCACGCCTTCGTTCTA CAGCAGGACTCCTCTCACACCCTTTACGGCATCTGTCTGCGCGTCTGGTCCCGCGCTGACGACAAGAGGGCCGAG ACAATCCGTGACCTGAGAAAGCGCACCGAGTCAGACTTCTTCGACAACCCCGACGAGACCTATTGGATCCCGTAC TGCCTTTCTTTCCTGTCGCGATACCCCCTCTACAACCTCATGGGCGACTATCTGAGGGGCATGTGGATTCACTGG AACAAGGCCACCAACCTGTTCCACGCCGAGGAGGTCTCCCGCATCCTCAGCTTCCCAGCCCCGCGCCTCAATGAC CTGGTCCGCATCGACATGAAGGACTACGCACTCTGCTATCAGTTCCCCTCGTCGCCCACAGGCTTCCAGAACTTT GCTCTCTGGCCCCTTTTCACCTGCCTGTCCATACCCAACATCGTGGGCGTCATCGAGGCCGCCATCTCCCCGACC CGTCGCATCGTCTTCGTCAGCCACTATCCCGCCATGCTGACCGTCGCCGCCGAGACGGTCCGCTACTGCGTCCGC GTCTACGAATGGAGCGGCCTTTACGTGCCTGTCGTCCACGCTCGTCACGCCCAGGAACTCGTCCAGGAGCCCGGT CCCTACATTCTCGGCATCACCGCCGAGTGCCGCTCCCTCTTCACCGCGCCCAACGATGCCCTGGTCGTCGACCTC GACCGCAACTTCGTCCTGACCTCGAGCCCGCCCACGGCCCTGACGCCCGGTCAGCGCAACAAGTTCGTCACCCGC CTGACCCAGGCCCTCAACGGCGATGTCACCCCGTCCGGCGTCCCCCACCACCTCCGCTCATCGTACGGCGGCGGT AAGCTGGTCCCGGCCGGCCAGATCATCGTCATGCGCGGCGAGGTGGAGTCGATCGAGGACCCCGAATGGTGGAAC CAAGACTCTGTCATGGCCGTCATGGACCACGTTTGCGAGAAGCTGGGCCGCAACTCGGGCATCAAGGCCGTCTTC GGCGGCTCCGTCAAGAAGCCTCTCATGACCAAGGTGTCCATGCGCCACCTCAACGAGATCGTCCGCGAGAGGAAT CAGTACTCACGCGACGCCCTCGAGGCCTGGCAAGACTTTATCAACCTCAAGGGCCGCATGGACACGGAGCTGAGC AAAGTCAACAAGCGCAACAATTATCTGGTCGAGGAGCTCGAGAGTTGGAAGCAGCAGTTCCTCAAGTTCCAGGCT TTTGCCGAGCAGCTCACCAAGGAGACGCAGGATCTCAAGGTCAAGATTGAGGGCCACAAGCGGGAGGCCCGCCGC CTCACGGGCCTCATCGACCAGCAAAAGGACGACAATGCCCGCCTCTCGGTCCGCCTCGGCGGCACCGAGAAGCAG CGCGACGACGCTCTCGAGGCCCTCGTCCTCCAGCAGGAGATTGCCGAGGAGCTCGAGCGCGAGCGCAAGAGGAAT CAGAAGGAGCTCGCTCATCTACACCACACGAGCAGCAACAGGGTGCGCGAGCGCGACGAGGCCCGCCGCGTGGTG CTGCACCTCCACAGCCTCATCAGCGGCCAGAGTCATCACATGGAGCACCTGATACAGTCGCTGACGAAGCCCGAC GGTCTGGCCCGCGAGATCGCCCTGGCCTACGAGGAGGGCGAGGAAGAGGAGGACGAGGACGAGGACGAGGACGAG GAAGGGGCGAACCTCGACAGCCACGCCCCGGCCGATGCCGCTGTCCGGGGCAGTAAACGTCTTTCCTCACCGGGC TTCTTCGACATCGCCGATCGCCACCTCAAGGACAAGACGGACGCCATCGCACACATCGTGCGCAACATCGCGGAC CAGTGCCAGGCGGCCGTCGAGGGCCTGCAGCTGGCTCAGGACGCCGAGCTGCGGTCTCTGCGCCGCCACAGCAAC CTTTCCGCCCTGCATAGCGAGGACGGCATCGAAGAAGGGAGCGTGGCGACGACCGAGGCCGGCGACGACGTCCGT CCCCTGCTGGGATCGGGACGCGCCTCGAGTATCCCCCCGACGCCTGACCTGATTCCTAACCGCAGCAGCACGGCC ATGTCGTTTGCTTCGGCGACAACGACGCCCGAGCGATCCAGCCAGCAGTTCGCGGCCGGTGGCGACATCCCGACC AAGATCGTCGAGGACGACGAGGAAATTTACGAGGAGAGCCGGAGCGACAACGGCGTCGTCGCCAAGCCGACCGAG ACGCTGCTTCACCGCGCGCCAGGAGCCAGGATAAGCGCCCTCGGCGGCTCTCGA |
Transcript | >Ophio5|5894 ATGCCTCCGTCCCTGACCCGCCCTCGGACCGGAGACCGCGAGGCTCGTCCCGGCACTCGCGATCAGGGCACCAAC GACAACATGCTCATCCCGAGCCGCACCTCGTCGCTGCACTCGCGAATCACCCAGCCTATCCCTTCCATCCTTTCC GCCAAGCCCCAGCAGCGCACTCCCAAGACGCTCACTCATGCCTACATGGTCTGTGGCGTCGGCCGCGAGCCTTCG CAATGGGTCAAAGCCCCTCCCCCGCCACAGGGTAAGATCAGCCACATGAAGGGCGCCGTCGGCCAATTCTGGCTG CCCGAGATCCTCGGTAGCAGCCCTCGCCTCGAGCAGGATAATGAGGTGGCCCGCGCCCTGCACGCTGCCATGAGG GCCTGCTTCCCCCACGATGTCGAGATTTGTACGGGCCGGAACCAGCCGCACTGCGTTCATCACGCCTTCGTTCTA CAGCAGGACTCCTCTCACACCCTTTACGGCATCTGTCTGCGCGTCTGGTCCCGCGCTGACGACAAGAGGGCCGAG ACAATCCGTGACCTGAGAAAGCGCACCGAGTCAGACTTCTTCGACAACCCCGACGAGACCTATTGGATCCCGTAC TGCCTTTCTTTCCTGTCGCGATACCCCCTCTACAACCTCATGGGCGACTATCTGAGGGGCATGTGGATTCACTGG AACAAGGCCACCAACCTGTTCCACGCCGAGGAGGTCTCCCGCATCCTCAGCTTCCCAGCCCCGCGCCTCAATGAC CTGGTCCGCATCGACATGAAGGACTACGCACTCTGCTATCAGTTCCCCTCGTCGCCCACAGGCTTCCAGAACTTT GCTCTCTGGCCCCTTTTCACCTGCCTGTCCATACCCAACATCGTGGGCGTCATCGAGGCCGCCATCTCCCCGACC CGTCGCATCGTCTTCGTCAGCCACTATCCCGCCATGCTGACCGTCGCCGCCGAGACGGTCCGCTACTGCGTCCGC GTCTACGAATGGAGCGGCCTTTACGTGCCTGTCGTCCACGCTCGTCACGCCCAGGAACTCGTCCAGGAGCCCGGT CCCTACATTCTCGGCATCACCGCCGAGTGCCGCTCCCTCTTCACCGCGCCCAACGATGCCCTGGTCGTCGACCTC GACCGCAACTTCGTCCTGACCTCGAGCCCGCCCACGGCCCTGACGCCCGGTCAGCGCAACAAGTTCGTCACCCGC CTGACCCAGGCCCTCAACGGCGATGTCACCCCGTCCGGCGTCCCCCACCACCTCCGCTCATCGTACGGCGGCGGT AAGCTGGTCCCGGCCGGCCAGATCATCGTCATGCGCGGCGAGGTGGAGTCGATCGAGGACCCCGAATGGTGGAAC CAAGACTCTGTCATGGCCGTCATGGACCACGTTTGCGAGAAGCTGGGCCGCAACTCGGGCATCAAGGCCGTCTTC GGCGGCTCCGTCAAGAAGCCTCTCATGACCAAGGTGTCCATGCGCCACCTCAACGAGATCGTCCGCGAGAGGAAT CAGTACTCACGCGACGCCCTCGAGGCCTGGCAAGACTTTATCAACCTCAAGGGCCGCATGGACACGGAGCTGAGC AAAGTCAACAAGCGCAACAATTATCTGGTCGAGGAGCTCGAGAGTTGGAAGCAGCAGTTCCTCAAGTTCCAGGCT TTTGCCGAGCAGCTCACCAAGGAGACGCAGGATCTCAAGGTCAAGATTGAGGGCCACAAGCGGGAGGCCCGCCGC CTCACGGGCCTCATCGACCAGCAAAAGGACGACAATGCCCGCCTCTCGGTCCGCCTCGGCGGCACCGAGAAGCAG CGCGACGACGCTCTCGAGGCCCTCGTCCTCCAGCAGGAGATTGCCGAGGAGCTCGAGCGCGAGCGCAAGAGGAAT CAGAAGGAGCTCGCTCATCTACACCACACGAGCAGCAACAGGGTGCGCGAGCGCGACGAGGCCCGCCGCGTGGTG CTGCACCTCCACAGCCTCATCAGCGGCCAGAGTCATCACATGGAGCACCTGATACAGTCGCTGACGAAGCCCGAC GGTCTGGCCCGCGAGATCGCCCTGGCCTACGAGGAGGGCGAGGAAGAGGAGGACGAGGACGAGGACGAGGACGAG GAAGGGGCGAACCTCGACAGCCACGCCCCGGCCGATGCCGCTGTCCGGGGCAGTAAACGTCTTTCCTCACCGGGC TTCTTCGACATCGCCGATCGCCACCTCAAGGACAAGACGGACGCCATCGCACACATCGTGCGCAACATCGCGGAC CAGTGCCAGGCGGCCGTCGAGGGCCTGCAGCTGGCTCAGGACGCCGAGCTGCGGTCTCTGCGCCGCCACAGCAAC CTTTCCGCCCTGCATAGCGAGGACGGCATCGAAGAAGGGAGCGTGGCGACGACCGAGGCCGGCGACGACGTCCGT CCCCTGCTGGGATCGGGACGCGCCTCGAGTATCCCCCCGACGCCTGACCTGATTCCTAACCGCAGCAGCACGGCC ATGTCGTTTGCTTCGGCGACAACGACGCCCGAGCGATCCAGCCAGCAGTTCGCGGCCGGTGGCGACATCCCGACC AAGATCGTCGAGGACGACGAGGAAATTTACGAGGAGAGCCGGAGCGACAACGGCGTCGTCGCCAAGCCGACCGAG ACGCTGCTTCACCGCGCGCCAGGAGCCAGGATAAGCGCCCTCGGCGGCTCTCGATAG |
Gene | >Ophio5|5894 ATGCCTCCGTCCCTGACCCGCCCTCGGACCGGAGACCGCGAGGCTCGTCCCGGCACTCGCGATCAGGGCACCAAC GACAACATGCTCATCCCGAGCCGCACCTCGTCGCTGCACTCGCGAATCACCCAGCCTATCCCTTCCATCCTTTCC GCCAAGCCCCAGCAGCGCACTCCCAAGACGCTCACTCATGCCTACATGGTCTGTGGCGTCGGCCGCGAGCCTTCG CAATGGGTCAAAGCCCCTCCCCCGCCACAGGGTAAGATCAGCCACATGAAGGGCGCCGTCGGCCAATTCTGGCTG CCCGAGATCCTCGGTAGCAGCCCTCGCCTCGAGCAGGATAATGAGGTGGCCCGCGCCCTGCACGCTGCCATGAGG GTGAGTCTCCCCTGGCCGCGTCTGCATCTTGCTCACCCGCTGACCTTGTCCAAGGCCTGCTTCCCCCACGATGTC GAGATTTGTACGGGCCGGAACCAGCCGCACTGCGTTCATCACGCCTTCGTTCTACAGCAGGACTCCTCTCACACC CTTTACGGCATCTGTCTGCGCGTCTGGTCCCGCGCTGACGACAAGAGGGCCGAGACAATCCGTGACCTGAGAAAG CGCACCGAGTCAGACTTCTTCGACAACCCCGACGAGACCTATTGGATCCCGTACTGCCTTTCTTTCCTGTCGCGA TACCCCCTCTACAACCTCATGGGCGACTATCTGAGGGGCATGTGGATTCACTGGAACAAGGCCACCAACCTGTTC CACGCCGAGGAGGTCTCCCGCATCCTCAGCTTCCCAGCCCCGCGCCTCAATGACCTGGTCCGCATCGACATGAAG GACTACGCACTCTGCTATCAGTTCCCCTCGTCGCCCACAGGCTTCCAGAACTTTGCTCTCTGGCCCCTTTTCACC TGCCTGTCCATACCCAACATCGTGGGCGTCATCGAGGCCGCCATCTCCCCGACCCGTCGCATCGTCTTCGTCAGC CACTATCCCGCCATGCTGACCGTCGCCGCCGAGACGGTCCGCTACTGCGTCCGCGTCTACGAATGGAGCGGCCTT TACGTGCCTGTCGTCCACGCTCGTCACGCCCAGGAACTCGTCCAGGAGCCCGGTCCCTACATTCTCGGCATCACC GCCGAGTGCCGCTCCCTCTTCACCGCGCCCAACGATGCCCTGGTCGTCGACCTCGACCGCAACTTCGTCCTGACC TCGAGCCCGCCCACGGCCCTGACGCCCGGTCAGCGCAACAAGTTCGTCACCCGCCTGACCCAGGCCCTCAACGGC GATGTCACCCCGTCCGGCGTCCCCCACCACCTCCGCTCATCGTACGGCGGCGGTAAGCTGGTCCCGGCCGGCCAG ATCATCGTCATGCGCGGCGAGGTGGAGTCGATCGAGGACCCCGAATGGTGGAACCAAGACTCTGTCATGGCCGTC ATGGACCACGTTTGCGAGAAGCTGGGCCGCAACTCGGGCATCAAGGCCGTCTTCGGCGGCTCCGTCAAGAAGCCT CTCATGACCAAGGTGTCCATGCGCCACCTCAACGAGATCGTCCGCGAGAGGAATCAGTACTCACGCGACGCCCTC GAGGCCTGGCAAGACTTTATCAACCTCAAGGGCCGCATGGACACGGAGCTGAGCAAAGTCAACAAGCGCAACAAT TATCTGGTCGAGGAGCTCGAGAGTTGGAAGCAGCAGTTCCTCAAGTTCCAGGCTTTTGCCGAGCAGCTCACCAAG GAGACGCAGGATCTCAAGGTCAAGATTGAGGGCCACAAGCGGGAGGCCCGCCGCCTCACGGGCCTCATCGACCAG CAAAAGGACGACAATGCCCGCCTCTCGGTCCGCCTCGGCGGCACCGAGAAGCAGCGCGACGACGCTCTCGAGGCC CTCGTCCTCCAGCAGGAGATTGCCGAGGAGCTCGAGCGCGAGCGCAAGAGGAATCAGAAGGAGCTCGCTCATCTA CACCACACGAGCAGCAACAGGGTGCGCGAGCGCGACGAGGCCCGCCGCGTGGTGCTGCACCTCCACAGCCTCATC AGCGGCCAGAGTCATCACATGGAGCACCTGATACAGTCGCTGACGAAGCCCGACGGTCTGGCCCGCGAGATCGCC CTGGCCTACGAGGAGGGCGAGGAAGAGGAGGACGAGGACGAGGACGAGGACGAGGAAGGGGCGAACCTCGACAGC CACGCCCCGGCCGATGCCGCTGTCCGGGGCAGTAAACGTCTTTCCTCACCGGGCTTCTTCGACATCGCCGATCGC CACCTCAAGGACAAGACGGACGCCATCGCACACATCGTGCGCAACATCGCGGACCAGTGCCAGGCGGCCGTCGAG GGCCTGCAGCTGGCTCAGGACGCCGAGCTGCGGTCTCTGCGCCGCCACAGCAACCTTTCCGCCCTGCATAGCGAG GACGGCATCGAAGAAGGGAGCGTGGCGACGACCGAGGCCGGCGACGACGTCCGTCCCCTGCTGGGATCGGGACGC GCCTCGAGTATCCCCCCGACGCCTGACCTGATTCCTAACCGCAGCAGCACGGCCATGTCGTTTGCTTCGGCGACA ACGACGCCCGAGCGATCCAGCCAGCAGTTCGCGGCCGGTGGCGACATCCCGACCAAGATCGTCGAGGACGACGAG GAAATTTACGAGGAGAGCCGGAGCGACAACGGCGTCGTCGCCAAGCCGACCGAGACGCTGCTTCACCGCGCGCCA GGAGCCAGGATAAGCGCCCTCGGCGGCTCTCGATAG |