Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|5892
Gene name
Location	scaffold_498:3677..5063
Strand	+
Gene length (bp)	1386
Transcript length (bp)	1386
Coding sequence length (bp)	1383
Protein length (aa)	461

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01593	Amino_oxidase	Flavin containing amine oxidoreductase	3.5E-17	36	289
PF12831	FAD_oxidored	FAD dependent oxidoreductase	5.5E-09	26	68
PF13450	NAD_binding_8	NAD(P)-binding Rossmann-like domain	8.0E-09	29	83
PF00890	FAD_binding_2	FAD binding domain	8.9E-05	26	63

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|F5HN72\|CPAO_ASPOZ	Beta-cyclopiazonate dehydrogenase OS=Aspergillus oryzae GN=cpaO PE=1 SV=1	8	455	8.0E-111
sp\|Q2UG11\|CPAO_ASPOR	Beta-cyclopiazonate dehydrogenase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cpaO PE=1 SV=1	8	455	8.0E-111
sp\|B8NI10\|CPAO_ASPFN	Beta-cyclopiazonate dehydrogenase OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=cpaO PE=1 SV=1	3	455	1.0E-108
sp\|Q5UR19\|YR656_MIMIV	Uncharacterized protein R656 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R656 PE=3 SV=1	17	430	2.0E-24

GO

GO Term	Description	Terminal node
GO:0016491	oxidoreductase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	6.57	2.14	11.00
CcL	In ants, during behavior modification	452.97	41.11	864.83
CcD	In ants, recently dead	322.08	147.09	497.08

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.000286	yes
SC16a	CcD	0.000286	yes
CcL	CcD	0.340834	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|5892 MVLGSFCIGLVAFLAFADAERVITRDVCILGGGSSGTYAAIRLKDRGKTVVIVEPKDVLGGHAETQYFPDGRHID YGVEGVFRNDLSTKYLQRLGVEYQSLLPNTSRIDYVDFRTGQSNSSHEVSGFLELLPQIVLYRLALNNFDYLRKG LFNEIPEPVPETLLQPFREFASRNQLQQPLLDLIFTFASGVGNVLDTPLLYVLQNFGIPHVEALLSGYVKPVKGM NEVYRRAEKIIGTENILFGAKAREVTRRDDGGAGIVISVMDKKGQRYAIHAKQLLVAMPLTAENTAPLLLDESDR ALFRKWKWSNYYAAVIKTGGLPDKVDIANEDPTQKYSFPLPPFQWRLQYMGVPGYHISKIVADSNFEPRKAHYLI LTDILRMKSVYPVQTPEIVAFADHSPTSLSVSVEHLRAGFYRRLYALQGRADTFYTGNSLCSDYSSLLWAYTDEV IDLMVGRELLV
Coding	>Ophio5\|5892 ATGGTCCTCGGCTCGTTTTGCATCGGACTGGTAGCCTTCCTGGCCTTCGCAGATGCGGAGCGGGTCATCACTCGT GACGTCTGCATCCTCGGCGGCGGGAGCAGTGGGACGTACGCGGCGATACGACTCAAGGATCGGGGCAAGACGGTC GTTATTGTTGAGCCCAAGGACGTTCTGGGCGGACACGCGGAGACGCAGTATTTCCCGGATGGACGCCACATCGAC TACGGTGTCGAGGGCGTCTTCAGAAATGACTTGTCGACAAAGTATCTGCAGCGGCTGGGCGTCGAGTACCAATCC TTGCTGCCCAACACCTCGCGTATTGACTACGTCGACTTCCGAACGGGACAGAGCAACAGCAGTCACGAGGTTTCG GGTTTTCTGGAGTTGCTGCCTCAGATCGTGCTGTACCGTCTGGCCTTGAATAACTTCGACTACCTCCGCAAAGGG CTCTTCAATGAGATCCCGGAGCCGGTACCGGAGACGCTCCTGCAGCCGTTTCGAGAGTTCGCGTCCCGGAATCAG CTGCAGCAGCCGCTACTAGATCTCATCTTCACCTTTGCCAGCGGCGTGGGCAACGTACTGGACACGCCGCTGTTG TACGTGTTGCAAAACTTTGGTATCCCCCATGTCGAGGCCCTGCTGTCGGGTTACGTGAAGCCGGTCAAGGGCATG AACGAAGTCTATCGTCGGGCCGAGAAGATTATCGGCACGGAAAACATTCTCTTCGGTGCGAAAGCGAGGGAGGTG ACGCGCCGAGACGACGGCGGGGCCGGCATCGTCATCAGCGTCATGGATAAGAAAGGTCAACGTTACGCCATCCAC GCCAAACAGCTCCTCGTCGCCATGCCGCTCACGGCGGAGAACACGGCGCCGCTGCTTCTGGACGAGTCGGACCGG GCCCTGTTCCGTAAGTGGAAATGGAGCAACTACTACGCCGCCGTCATCAAGACGGGTGGCCTCCCCGACAAGGTC GACATCGCCAACGAGGACCCGACGCAAAAGTACAGCTTCCCCCTGCCGCCCTTCCAATGGCGTCTGCAGTACATG GGCGTGCCGGGCTACCACATCAGCAAGATCGTGGCCGACAGCAACTTCGAGCCGCGCAAGGCCCACTATCTCATC CTCACCGACATCCTCCGCATGAAGAGCGTCTATCCCGTCCAGACGCCCGAAATCGTTGCTTTCGCCGACCATTCT CCCACCAGCTTGAGTGTCTCGGTCGAACATCTTCGCGCCGGCTTCTATCGTCGACTGTATGCGCTGCAGGGTCGT GCCGACACCTTTTACACCGGCAACTCGTTGTGCTCGGATTACTCGTCCCTGCTCTGGGCCTATACCGACGAGGTC ATCGATTTGATGGTGGGACGAGAGCTGTTGGTT
Transcript	>Ophio5\|5892 ATGGTCCTCGGCTCGTTTTGCATCGGACTGGTAGCCTTCCTGGCCTTCGCAGATGCGGAGCGGGTCATCACTCGT GACGTCTGCATCCTCGGCGGCGGGAGCAGTGGGACGTACGCGGCGATACGACTCAAGGATCGGGGCAAGACGGTC GTTATTGTTGAGCCCAAGGACGTTCTGGGCGGACACGCGGAGACGCAGTATTTCCCGGATGGACGCCACATCGAC TACGGTGTCGAGGGCGTCTTCAGAAATGACTTGTCGACAAAGTATCTGCAGCGGCTGGGCGTCGAGTACCAATCC TTGCTGCCCAACACCTCGCGTATTGACTACGTCGACTTCCGAACGGGACAGAGCAACAGCAGTCACGAGGTTTCG GGTTTTCTGGAGTTGCTGCCTCAGATCGTGCTGTACCGTCTGGCCTTGAATAACTTCGACTACCTCCGCAAAGGG CTCTTCAATGAGATCCCGGAGCCGGTACCGGAGACGCTCCTGCAGCCGTTTCGAGAGTTCGCGTCCCGGAATCAG CTGCAGCAGCCGCTACTAGATCTCATCTTCACCTTTGCCAGCGGCGTGGGCAACGTACTGGACACGCCGCTGTTG TACGTGTTGCAAAACTTTGGTATCCCCCATGTCGAGGCCCTGCTGTCGGGTTACGTGAAGCCGGTCAAGGGCATG AACGAAGTCTATCGTCGGGCCGAGAAGATTATCGGCACGGAAAACATTCTCTTCGGTGCGAAAGCGAGGGAGGTG ACGCGCCGAGACGACGGCGGGGCCGGCATCGTCATCAGCGTCATGGATAAGAAAGGTCAACGTTACGCCATCCAC GCCAAACAGCTCCTCGTCGCCATGCCGCTCACGGCGGAGAACACGGCGCCGCTGCTTCTGGACGAGTCGGACCGG GCCCTGTTCCGTAAGTGGAAATGGAGCAACTACTACGCCGCCGTCATCAAGACGGGTGGCCTCCCCGACAAGGTC GACATCGCCAACGAGGACCCGACGCAAAAGTACAGCTTCCCCCTGCCGCCCTTCCAATGGCGTCTGCAGTACATG GGCGTGCCGGGCTACCACATCAGCAAGATCGTGGCCGACAGCAACTTCGAGCCGCGCAAGGCCCACTATCTCATC CTCACCGACATCCTCCGCATGAAGAGCGTCTATCCCGTCCAGACGCCCGAAATCGTTGCTTTCGCCGACCATTCT CCCACCAGCTTGAGTGTCTCGGTCGAACATCTTCGCGCCGGCTTCTATCGTCGACTGTATGCGCTGCAGGGTCGT GCCGACACCTTTTACACCGGCAACTCGTTGTGCTCGGATTACTCGTCCCTGCTCTGGGCCTATACCGACGAGGTC ATCGATTTGATGGTGGGACGAGAGCTGTTGGTTTAG
Gene	>Ophio5\|5892 ATGGTCCTCGGCTCGTTTTGCATCGGACTGGTAGCCTTCCTGGCCTTCGCAGATGCGGAGCGGGTCATCACTCGT GACGTCTGCATCCTCGGCGGCGGGAGCAGTGGGACGTACGCGGCGATACGACTCAAGGATCGGGGCAAGACGGTC GTTATTGTTGAGCCCAAGGACGTTCTGGGCGGACACGCGGAGACGCAGTATTTCCCGGATGGACGCCACATCGAC TACGGTGTCGAGGGCGTCTTCAGAAATGACTTGTCGACAAAGTATCTGCAGCGGCTGGGCGTCGAGTACCAATCC TTGCTGCCCAACACCTCGCGTATTGACTACGTCGACTTCCGAACGGGACAGAGCAACAGCAGTCACGAGGTTTCG GGTTTTCTGGAGTTGCTGCCTCAGATCGTGCTGTACCGTCTGGCCTTGAATAACTTCGACTACCTCCGCAAAGGG CTCTTCAATGAGATCCCGGAGCCGGTACCGGAGACGCTCCTGCAGCCGTTTCGAGAGTTCGCGTCCCGGAATCAG CTGCAGCAGCCGCTACTAGATCTCATCTTCACCTTTGCCAGCGGCGTGGGCAACGTACTGGACACGCCGCTGTTG TACGTGTTGCAAAACTTTGGTATCCCCCATGTCGAGGCCCTGCTGTCGGGTTACGTGAAGCCGGTCAAGGGCATG AACGAAGTCTATCGTCGGGCCGAGAAGATTATCGGCACGGAAAACATTCTCTTCGGTGCGAAAGCGAGGGAGGTG ACGCGCCGAGACGACGGCGGGGCCGGCATCGTCATCAGCGTCATGGATAAGAAAGGTCAACGTTACGCCATCCAC GCCAAACAGCTCCTCGTCGCCATGCCGCTCACGGCGGAGAACACGGCGCCGCTGCTTCTGGACGAGTCGGACCGG GCCCTGTTCCGTAAGTGGAAATGGAGCAACTACTACGCCGCCGTCATCAAGACGGGTGGCCTCCCCGACAAGGTC GACATCGCCAACGAGGACCCGACGCAAAAGTACAGCTTCCCCCTGCCGCCCTTCCAATGGCGTCTGCAGTACATG GGCGTGCCGGGCTACCACATCAGCAAGATCGTGGCCGACAGCAACTTCGAGCCGCGCAAGGCCCACTATCTCATC CTCACCGACATCCTCCGCATGAAGAGCGTCTATCCCGTCCAGACGCCCGAAATCGTTGCTTTCGCCGACCATTCT CCCACCAGCTTGAGTGTCTCGGTCGAACATCTTCGCGCCGGCTTCTATCGTCGACTGTATGCGCTGCAGGGTCGT GCCGACACCTTTTACACCGGCAACTCGTTGTGCTCGGATTACTCGTCCCTGCTCTGGGCCTATACCGACGAGGTC ATCGATTTGATGGTGGGACGAGAGCTGTTGGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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