Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5886
Gene name
Locationscaffold_497:2511..4043
Strand+
Gene length (bp)1532
Transcript length (bp)1443
Coding sequence length (bp)1440
Protein length (aa) 480

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 435 457 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5886
MELLLISLLLLLLRHASAAADDDERVLGVYIFHRHGDRSAKAWKPVNLTALGAVQVHSSGSFYRDRYVTGDGRLA
GLGTDVAVAGQLSVTAPRDAVLQASALTFLQGLYPPQDSVAETLANGSRVVAPLGGYQFVPVDPAAARTGDRPED
SAWLQGGTGCVNAEVSSNGYLASKEYHDDYHDSLDFYQRLLPVIKDTYGQDAANFKNGYSIFDLINVATIHNASI
PSASLLTPSTRARLFHLASAHEWNLAYNTSEPIRAIAGAVLAGQMLDSLRAIVDGKPAAPRLNAQFGAYGTFMAF
FGLARMPAASADFYGICNYASSMVLELVSKVAKPGPDDVSVRFLFANGSAADTPLKPYPLFGQKSLTTPWREFAS
AMGQFAITDSAHWCDVCGKTDGECAEVTHHAAGAQQDVNKDGDESGGGISKPVAGVIGALVTLVTIIGLLAAVML
LGGLRLVRKSSLGVARRRPDESVEAGLAKV
Coding >Ophio5|5886
ATGGAGCTGCTGCTCATCTCGCTTCTCTTGCTTCTGCTGCGCCACGCCTCGGCTGCCGCTGATGATGATGAGCGA
GTGTTGGGCGTCTACATCTTCCACCGACACGGCGACCGATCAGCCAAGGCATGGAAGCCCGTCAACCTGACGGCT
CTCGGGGCCGTACAGGTTCATTCCTCCGGCAGCTTCTACCGCGACCGCTACGTGACCGGGGACGGCCGTCTGGCT
GGCCTTGGCACCGATGTGGCCGTGGCCGGCCAGCTTTCCGTCACGGCGCCGCGAGACGCCGTGCTGCAGGCTTCG
GCTCTCACTTTTCTTCAGGGCCTGTATCCGCCGCAGGACTCCGTGGCGGAGACGTTGGCTAATGGCTCGCGGGTG
GTGGCGCCTCTCGGTGGCTATCAGTTCGTTCCTGTTGATCCGGCTGCTGCCCGGACGGGAGACAGGCCAGAGGAT
AGCGCTTGGTTGCAGGGCGGGACGGGTTGTGTGAATGCCGAGGTCAGCTCTAATGGATATCTCGCGTCCAAGGAG
TATCATGACGACTATCACGACTCGCTCGACTTTTATCAGCGTTTGTTGCCCGTCATCAAGGACACCTACGGCCAG
GACGCGGCCAATTTTAAGAACGGCTACTCGATCTTCGATCTGATCAACGTGGCCACCATCCACAACGCCTCGATC
CCTTCGGCCTCCCTCCTGACACCCTCTACGCGGGCCCGACTCTTCCACCTCGCCTCTGCGCACGAATGGAACCTG
GCGTACAACACCAGCGAGCCCATCCGCGCCATCGCCGGTGCCGTCCTCGCCGGTCAGATGCTCGACTCGCTGCGG
GCCATTGTCGACGGCAAGCCGGCCGCTCCCAGGCTCAACGCCCAATTCGGTGCGTACGGTACCTTCATGGCCTTT
TTCGGCCTCGCTCGCATGCCGGCCGCGAGCGCCGACTTTTACGGAATCTGCAACTACGCATCCTCCATGGTCTTG
GAGCTCGTCTCCAAGGTTGCCAAGCCCGGTCCGGATGACGTCTCGGTCCGCTTCCTCTTCGCCAATGGTTCCGCT
GCCGACACTCCCCTCAAGCCGTACCCGCTCTTCGGTCAAAAGTCGCTGACGACGCCCTGGCGCGAGTTCGCCTCG
GCCATGGGCCAGTTCGCCATCACCGACTCGGCCCACTGGTGTGACGTCTGCGGCAAGACGGATGGCGAGTGCGCC
GAGGTGACGCATCACGCCGCCGGCGCCCAACAAGACGTCAATAAGGACGGCGACGAGAGCGGCGGCGGTATTTCC
AAGCCCGTGGCTGGTGTCATTGGCGCCCTCGTCACCCTCGTCACCATCATCGGCCTTCTCGCTGCCGTCATGCTA
CTCGGCGGCTTGCGTCTCGTTCGCAAGTCTTCCCTTGGCGTTGCACGCCGTCGGCCTGACGAGTCTGTCGAAGCT
GGCCTGGCCAAGGTC
Transcript >Ophio5|5886
ATGGAGCTGCTGCTCATCTCGCTTCTCTTGCTTCTGCTGCGCCACGCCTCGGCTGCCGCTGATGATGATGAGCGA
GTGTTGGGCGTCTACATCTTCCACCGACACGGCGACCGATCAGCCAAGGCATGGAAGCCCGTCAACCTGACGGCT
CTCGGGGCCGTACAGGTTCATTCCTCCGGCAGCTTCTACCGCGACCGCTACGTGACCGGGGACGGCCGTCTGGCT
GGCCTTGGCACCGATGTGGCCGTGGCCGGCCAGCTTTCCGTCACGGCGCCGCGAGACGCCGTGCTGCAGGCTTCG
GCTCTCACTTTTCTTCAGGGCCTGTATCCGCCGCAGGACTCCGTGGCGGAGACGTTGGCTAATGGCTCGCGGGTG
GTGGCGCCTCTCGGTGGCTATCAGTTCGTTCCTGTTGATCCGGCTGCTGCCCGGACGGGAGACAGGCCAGAGGAT
AGCGCTTGGTTGCAGGGCGGGACGGGTTGTGTGAATGCCGAGGTCAGCTCTAATGGATATCTCGCGTCCAAGGAG
TATCATGACGACTATCACGACTCGCTCGACTTTTATCAGCGTTTGTTGCCCGTCATCAAGGACACCTACGGCCAG
GACGCGGCCAATTTTAAGAACGGCTACTCGATCTTCGATCTGATCAACGTGGCCACCATCCACAACGCCTCGATC
CCTTCGGCCTCCCTCCTGACACCCTCTACGCGGGCCCGACTCTTCCACCTCGCCTCTGCGCACGAATGGAACCTG
GCGTACAACACCAGCGAGCCCATCCGCGCCATCGCCGGTGCCGTCCTCGCCGGTCAGATGCTCGACTCGCTGCGG
GCCATTGTCGACGGCAAGCCGGCCGCTCCCAGGCTCAACGCCCAATTCGGTGCGTACGGTACCTTCATGGCCTTT
TTCGGCCTCGCTCGCATGCCGGCCGCGAGCGCCGACTTTTACGGAATCTGCAACTACGCATCCTCCATGGTCTTG
GAGCTCGTCTCCAAGGTTGCCAAGCCCGGTCCGGATGACGTCTCGGTCCGCTTCCTCTTCGCCAATGGTTCCGCT
GCCGACACTCCCCTCAAGCCGTACCCGCTCTTCGGTCAAAAGTCGCTGACGACGCCCTGGCGCGAGTTCGCCTCG
GCCATGGGCCAGTTCGCCATCACCGACTCGGCCCACTGGTGTGACGTCTGCGGCAAGACGGATGGCGAGTGCGCC
GAGGTGACGCATCACGCCGCCGGCGCCCAACAAGACGTCAATAAGGACGGCGACGAGAGCGGCGGCGGTATTTCC
AAGCCCGTGGCTGGTGTCATTGGCGCCCTCGTCACCCTCGTCACCATCATCGGCCTTCTCGCTGCCGTCATGCTA
CTCGGCGGCTTGCGTCTCGTTCGCAAGTCTTCCCTTGGCGTTGCACGCCGTCGGCCTGACGAGTCTGTCGAAGCT
GGCCTGGCCAAGGTCTGA
Gene >Ophio5|5886
ATGGAGCTGCTGCTCATCTCGCTTCTCTTGCTTCTGCTGCGCCACGCCTCGGCTGCCGCTGATGATGATGAGCGA
GTGTTGGGCGTCTACATCTTCCACCGACACGGCGACCGATCAGCCAAGGCATGGAAGCCCGTCAACCTGACGGCT
CTCGGGGCCGTACAGGTTCATTCCTCCGGCAGCTTCTACCGCGACCGCTACGTGACCGGGGACGGCCGTCTGGCT
GGCCTTGGCACCGATGTGGCCGTGGCCGGCCAGCTTTCCGTCACGGCGCCGCGAGACGCCGTGCTGCAGGCTTCG
GCTCTCACTTTTCTTCAGGGCCTGTATCCGCCGCAGGACTCCGTGGCGGAGACGTTGGCTAATGGCTCGCGGGTG
GTGGCGCCTCTCGGTGGCTATCAGTTCGTTCCTGTTGATCCGGCTGCTGCCCGGACGGGAGACAGGCCAGAGGAT
AGCGCTTGGTTGCAGGGCGGGACGGGTTGTGTGAATGCCGAGGTCAGCTCTAATGGATATCTCGCGTCCAAGGAG
TATCATGACGACTATCACGACTCGCTCGACTTTTATCAGCGTTTGTTGCCCGTCATCAAGGACACCTACGGCCAG
GACGCGGCCAATTTTAAGAACGGCTACTCGAGTCCGTCTCTCTCTCCCCCTCCCCCTCCCCCTCCCCCCCTTTTT
TTTTTCTCTCTCTCTCTCTCTCCGCTCGCTGACAAGCTTCCAAAGTCTTCGATCTGATCAACGTGGCCACCATCC
ACAACGCCTCGATCCCTTCGGCCTCCCTCCTGACACCCTCTACGCGGGCCCGACTCTTCCACCTCGCCTCTGCGC
ACGAATGGAACCTGGCGTACAACACCAGCGAGCCCATCCGCGCCATCGCCGGTGCCGTCCTCGCCGGTCAGATGC
TCGACTCGCTGCGGGCCATTGTCGACGGCAAGCCGGCCGCTCCCAGGCTCAACGCCCAATTCGGTGCGTACGGTA
CCTTCATGGCCTTTTTCGGCCTCGCTCGCATGCCGGCCGCGAGCGCCGACTTTTACGGAATCTGCAACTACGCAT
CCTCCATGGTCTTGGAGCTCGTCTCCAAGGTTGCCAAGCCCGGTCCGGATGACGTCTCGGTCCGCTTCCTCTTCG
CCAATGGTTCCGCTGCCGACACTCCCCTCAAGCCGTACCCGCTCTTCGGTCAAAAGTCGCTGACGACGCCCTGGC
GCGAGTTCGCCTCGGCCATGGGCCAGTTCGCCATCACCGACTCGGCCCACTGGTGTGACGTCTGCGGCAAGACGG
ATGGCGAGTGCGCCGAGGTGACGCATCACGCCGCCGGCGCCCAACAAGACGTCAATAAGGACGGCGACGAGAGCG
GCGGCGGTATTTCCAAGCCCGTGGCTGGTGTCATTGGCGCCCTCGTCACCCTCGTCACCATCATCGGCCTTCTCG
CTGCCGTCATGCTACTCGGCGGCTTGCGTCTCGTTCGCAAGTCTTCCCTTGGCGTTGCACGCCGTCGGCCTGACG
AGTCTGTCGAAGCTGGCCTGGCCAAGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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