Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5865
Gene name
Locationscaffold_493:10245..11177
Strand+
Gene length (bp)932
Transcript length (bp)786
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 185 207 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5865
MIPSLLALLVLASPLSAAKQQCYHIDGTPSADSSQPCNPEAVFSPCCDTNKAKPDICLSSGLCYAQDSGFEGFIY
SNGCTDPSGKADACPHVCPDRTNNWKGGPVIGSYNVLQCREGGHFCCRKAMDSENCCGVADAAVSVNIGQLRFPT
STATTTSTTTTPTSAVCHPDRAVSGEGCPKDNSAVVGGAVGGVLGAALLGSLGALAVMCLRRGRRSAEEQPAPSH
SKRHGRRGDPARASQQAGSRDAWEPDERRWAGRLQG
Coding >Ophio5|5865
ATGATCCCCTCTCTGCTGGCTCTGCTCGTGCTCGCTTCTCCGCTGTCGGCAGCGAAGCAGCAGTGCTATCACATC
GACGGGACCCCCTCCGCCGACAGCAGTCAGCCGTGCAACCCGGAAGCCGTCTTCAGTCCCTGTTGCGACACGAAC
AAGGCGAAGCCCGACATCTGCCTGTCGTCTGGCCTGTGCTACGCGCAAGATTCCGGCTTTGAGGGCTTCATTTAT
TCCAATGGCTGCACCGACCCTTCAGGCAAGGCCGACGCCTGTCCGCACGTCTGTCCGGATCGGACCAATAATTGG
AAGGGCGGGCCCGTTATCGGCTCGTACAACGTGCTACAGTGTAGAGAGGGCGGCCACTTTTGTTGTCGCAAGGCG
ATGGATTCGGAAAACTGCTGTGGTGTTGCCGATGCCGCCGTGAGCGTCAATATCGGCCAGTTGCGCTTTCCGACC
TCAACGGCGACGACGACGAGTACAACGACGACGCCGACGTCTGCTGTATGTCATCCAGACCGTGCCGTGTCCGGC
GAAGGGTGTCCAAAGGACAACTCGGCCGTCGTCGGCGGAGCGGTGGGCGGAGTGCTCGGAGCCGCGCTGCTGGGC
AGCCTCGGCGCCTTGGCCGTCATGTGTCTGCGACGGGGGAGGAGGTCGGCGGAAGAACAACCAGCACCATCACAC
TCGAAACGCCATGGCCGCCGTGGGGACCCCGCACGAGCTTCCCAACAGGCCGGTTCACGAGATGCATGGGAGCCA
GATGAGAGGCGGTGGGCTGGACGCCTACAAGGC
Transcript >Ophio5|5865
ATGATCCCCTCTCTGCTGGCTCTGCTCGTGCTCGCTTCTCCGCTGTCGGCAGCGAAGCAGCAGTGCTATCACATC
GACGGGACCCCCTCCGCCGACAGCAGTCAGCCGTGCAACCCGGAAGCCGTCTTCAGTCCCTGTTGCGACACGAAC
AAGGCGAAGCCCGACATCTGCCTGTCGTCTGGCCTGTGCTACGCGCAAGATTCCGGCTTTGAGGGCTTCATTTAT
TCCAATGGCTGCACCGACCCTTCAGGCAAGGCCGACGCCTGTCCGCACGTCTGTCCGGATCGGACCAATAATTGG
AAGGGCGGGCCCGTTATCGGCTCGTACAACGTGCTACAGTGTAGAGAGGGCGGCCACTTTTGTTGTCGCAAGGCG
ATGGATTCGGAAAACTGCTGTGGTGTTGCCGATGCCGCCGTGAGCGTCAATATCGGCCAGTTGCGCTTTCCGACC
TCAACGGCGACGACGACGAGTACAACGACGACGCCGACGTCTGCTGTATGTCATCCAGACCGTGCCGTGTCCGGC
GAAGGGTGTCCAAAGGACAACTCGGCCGTCGTCGGCGGAGCGGTGGGCGGAGTGCTCGGAGCCGCGCTGCTGGGC
AGCCTCGGCGCCTTGGCCGTCATGTGTCTGCGACGGGGGAGGAGGTCGGCGGAAGAACAACCAGCACCATCACAC
TCGAAACGCCATGGCCGCCGTGGGGACCCCGCACGAGCTTCCCAACAGGCCGGTTCACGAGATGCATGGGAGCCA
GATGAGAGGCGGTGGGCTGGACGCCTACAAGGCTAG
Gene >Ophio5|5865
ATGATCCCCTCTCTGCTGGCTCTGCTCGTGCTCGCTTCTCCGCTGTCGGCAGCGAAGCAGCAGTGCTATCACATC
GACGGGACCCCCTCCGCCGACAGCAGTCAGCCGTGCAACCCGGAAGCCGTCTTCAGTCCCTGTTGCGACACGAAC
AAGGCGAAGCCCGACATCTGCCTGTCGTCTGGCCTGTGCTACGCGCAAGATTCCGGCTTTGAGGGCTTCATTTAT
TCCAATGGCTGCACCGACCCTTCAGGCAAGGCCGACGCCTGTCCGCACGTCTGTCCGGATCGTGAGCTTTCCCCC
CCCTTTCCTTTCCCCAAGTTTTGTCTTCTCTCAGCCTGACTTGACACGCTGCAAAGGGACCAATAATTGGAAGGG
CGGGCCCGTTATCGGCTCGTACAACGTGCTACAGTGTAGAGAGGGCGGCCACTTTTGTTGTCGCAAGGCGATGGA
TTCGGAAAACTGCTGTGGTGTTGCCGATGCCGCCGTGAGCGTCAATATCGGCCAGTTGCGCTTTCCGACCTCAAC
GGCGACGACGACGAGTACAACGACGACGCCGACGTCTGCTGTATGTCATCCAGACCGTGCCGTGTCCGGCGAAGG
GTGTCCAAAGGACAACTCGGCCGTCGTCGGCGGAGCGGTGGGCGGAGTGCTCGGAGCCGCGCTGCTGGGCAGCCT
CGGCGCCTTGGCCGTCATGTGTCTGCGACGGGGGAGGAGGTCGGCGGAAGAGTACGAATTCGGCGAGTGCAGCGA
AGCCATCCCTTCTAATCCTGGATACATGTCAGTTGCTGACGAGCTTTCCCAGACAACCAGCACCATCACACTCGA
AACGCCATGGCCGCCGTGGGGACCCCGCACGAGCTTCCCAACAGGCCGGTTCACGAGATGCATGGGAGCCAGATG
AGAGGCGGTGGGCTGGACGCCTACAAGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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