Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5850
Gene name
Locationscaffold_490:11808..14290
Strand-
Gene length (bp)2482
Transcript length (bp)2034
Coding sequence length (bp)2031
Protein length (aa) 677

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 2.2E-13 239 604
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 9.4E-07 75 108

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5A4F3|AHR1_CANAL Adhesion and hyphal regulator 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=AHR1 PE=1 SV=1 52 103 2.0E-09
sp|O59830|YCUA_SCHPO Uncharacterized transcriptional regulatory protein C965.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.10 PE=3 SV=1 67 121 1.0E-08
sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=moc3 PE=1 SV=4 70 107 1.0E-07
sp|P40971|LYS14_YEAST Lysine biosynthesis regulatory protein LYS14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYS14 PE=1 SV=2 45 122 2.0E-07
sp|O74308|YOG2_SCHPO Uncharacterized transcriptional regulatory protein C15D4.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.02 PE=3 SV=3 21 103 2.0E-07

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5850
MNNYFASDPDESGSSVGTGTSVPSSLAAHSSLEHIDGFHEPILVHASRTPNGRRKLSSGFENGTDVVKYRRTRSG
CFTCRSRRVKCDEIHPVCERCNKGNRKCVYPDPPSLKGPSNKSKTKEATLLAQKSRVNLSNSGEEDEMEKETRLE
GGHVEDEPAEALFQTHACSKAPVICTSAARMASCHDSESSSDGALRQSSSSSPPTANARAMGSQTACADEAGKKR
ADWSHLPLDFQHHLAYFVTNITNHHYSIANDGDDFFSIILPSMAVDHEPLLHAVVGFSAYHATLQKPDGQLQDFL
KYYNGGVTRLLESLQRKEANNVPVLVTILQLATMEEFLGDWVNLMGHQKAALEIITQIFEPGTVMDTAVGRMCLN
WYSRYDNYVAIMGGFPTGLSRQWFDVTMVYCQSQAAAHPDHVRWKIDHRSAQLRLITFDMSMLYARGSRGQLSPQ
AFAREHTRLTQELHEWKHTWDPALTDPNYLVTDLSYRKEAGPEDIVDPYQPGTLFHMPLFTTTLITAEWHSIVIM
HLSQSAKTPSPTLLAKFREHAYAACQYFEAVERWPGCPPGALVSLQPCISIAALFLPHDRQHQMWLRRKFALLDT
LGFIHPTTRRLKMARLFRDPSCSRWWLPNDEGLTPVLQSIRAFADERNAAAVDDQLDNIREGAHVRASSSGDGTR
DV
Coding >Ophio5|5850
ATGAACAACTATTTCGCCTCGGACCCGGACGAGTCGGGTTCGTCTGTAGGCACAGGCACTTCGGTGCCTTCGTCA
CTGGCTGCGCATTCGAGTCTCGAGCACATCGACGGTTTCCACGAGCCTATACTAGTTCACGCTTCCAGAACTCCC
AATGGTCGCAGGAAGCTGTCATCTGGTTTCGAGAACGGTACGGACGTCGTCAAGTATCGCAGGACAAGGTCTGGC
TGCTTCACGTGCAGGAGTCGAAGAGTCAAGTGTGACGAGATACATCCCGTGTGCGAGCGATGTAACAAGGGGAAT
CGCAAATGTGTCTACCCCGACCCTCCATCCTTAAAGGGACCTTCGAACAAGAGTAAGACGAAAGAAGCTACTCTT
TTAGCTCAGAAATCTCGCGTCAACCTTTCCAACAGTGGCGAGGAAGACGAGATGGAAAAAGAGACGAGGCTCGAA
GGCGGTCATGTCGAGGACGAGCCCGCCGAAGCCCTCTTTCAGACACACGCTTGCTCAAAGGCACCCGTGATATGC
ACGAGTGCGGCACGAATGGCTTCATGTCACGACTCAGAGAGCTCTTCAGATGGGGCATTGAGACAGTCGTCCTCG
TCCTCGCCCCCAACTGCGAATGCCAGGGCCATGGGAAGCCAAACGGCTTGTGCTGATGAAGCAGGAAAGAAACGG
GCGGATTGGTCGCATCTGCCACTCGACTTCCAGCACCATCTCGCATATTTCGTCACCAATATCACGAACCATCAC
TACAGTATAGCAAACGACGGGGATGACTTCTTTAGCATCATCTTGCCCAGCATGGCAGTCGACCATGAGCCTCTT
CTCCATGCGGTAGTGGGCTTCTCTGCCTACCATGCTACGTTGCAGAAGCCGGATGGGCAGCTTCAGGACTTCTTG
AAGTACTACAACGGCGGTGTGACTCGCCTGCTCGAGTCTCTACAACGCAAGGAGGCCAACAATGTGCCGGTATTA
GTCACGATTCTGCAGCTGGCGACGATGGAGGAGTTCCTCGGCGACTGGGTCAACCTGATGGGACACCAAAAGGCC
GCGCTCGAAATCATTACCCAAATATTCGAGCCCGGGACCGTCATGGACACGGCCGTGGGCAGGATGTGTCTCAAC
TGGTACAGCCGATATGACAACTACGTTGCCATCATGGGCGGCTTCCCCACCGGCCTCTCTCGCCAGTGGTTCGAT
GTGACCATGGTGTACTGCCAGTCTCAAGCGGCAGCGCACCCGGACCATGTCCGCTGGAAGATTGACCACCGGTCC
GCTCAACTGAGACTCATCACATTCGACATGTCGATGCTCTACGCCCGAGGGAGCCGCGGACAACTGTCTCCACAA
GCCTTTGCCCGGGAGCACACCAGGTTGACACAAGAGTTGCACGAGTGGAAACATACGTGGGATCCCGCCCTGACG
GACCCAAACTATCTCGTAACAGACCTCTCGTACAGAAAGGAAGCCGGCCCGGAGGATATTGTCGACCCCTACCAG
CCGGGCACTCTGTTCCACATGCCGCTCTTCACAACCACGCTCATCACCGCCGAATGGCACTCCATCGTCATCATG
CACCTGTCCCAGTCGGCCAAGACGCCGTCGCCTACCCTGCTCGCCAAGTTCAGGGAGCACGCCTACGCCGCCTGT
CAGTACTTTGAGGCCGTCGAGCGCTGGCCCGGGTGTCCGCCAGGGGCCTTGGTCTCGCTACAGCCGTGCATCTCC
ATCGCCGCGCTGTTCCTCCCGCACGACCGGCAGCATCAGATGTGGCTCCGTCGCAAATTTGCGCTGCTCGACACC
CTGGGCTTCATCCACCCAACAACCCGTCGCTTGAAAATGGCCCGTCTGTTCCGCGATCCATCGTGTTCGCGCTGG
TGGCTGCCCAACGACGAGGGCTTGACGCCCGTGCTGCAGAGCATCCGCGCCTTTGCCGACGAGCGCAATGCCGCC
GCCGTCGACGACCAGTTGGATAATATTCGCGAGGGGGCTCACGTCCGCGCCAGCAGCTCAGGGGACGGGACCCGA
GATGTG
Transcript >Ophio5|5850
ATGAACAACTATTTCGCCTCGGACCCGGACGAGTCGGGTTCGTCTGTAGGCACAGGCACTTCGGTGCCTTCGTCA
CTGGCTGCGCATTCGAGTCTCGAGCACATCGACGGTTTCCACGAGCCTATACTAGTTCACGCTTCCAGAACTCCC
AATGGTCGCAGGAAGCTGTCATCTGGTTTCGAGAACGGTACGGACGTCGTCAAGTATCGCAGGACAAGGTCTGGC
TGCTTCACGTGCAGGAGTCGAAGAGTCAAGTGTGACGAGATACATCCCGTGTGCGAGCGATGTAACAAGGGGAAT
CGCAAATGTGTCTACCCCGACCCTCCATCCTTAAAGGGACCTTCGAACAAGAGTAAGACGAAAGAAGCTACTCTT
TTAGCTCAGAAATCTCGCGTCAACCTTTCCAACAGTGGCGAGGAAGACGAGATGGAAAAAGAGACGAGGCTCGAA
GGCGGTCATGTCGAGGACGAGCCCGCCGAAGCCCTCTTTCAGACACACGCTTGCTCAAAGGCACCCGTGATATGC
ACGAGTGCGGCACGAATGGCTTCATGTCACGACTCAGAGAGCTCTTCAGATGGGGCATTGAGACAGTCGTCCTCG
TCCTCGCCCCCAACTGCGAATGCCAGGGCCATGGGAAGCCAAACGGCTTGTGCTGATGAAGCAGGAAAGAAACGG
GCGGATTGGTCGCATCTGCCACTCGACTTCCAGCACCATCTCGCATATTTCGTCACCAATATCACGAACCATCAC
TACAGTATAGCAAACGACGGGGATGACTTCTTTAGCATCATCTTGCCCAGCATGGCAGTCGACCATGAGCCTCTT
CTCCATGCGGTAGTGGGCTTCTCTGCCTACCATGCTACGTTGCAGAAGCCGGATGGGCAGCTTCAGGACTTCTTG
AAGTACTACAACGGCGGTGTGACTCGCCTGCTCGAGTCTCTACAACGCAAGGAGGCCAACAATGTGCCGGTATTA
GTCACGATTCTGCAGCTGGCGACGATGGAGGAGTTCCTCGGCGACTGGGTCAACCTGATGGGACACCAAAAGGCC
GCGCTCGAAATCATTACCCAAATATTCGAGCCCGGGACCGTCATGGACACGGCCGTGGGCAGGATGTGTCTCAAC
TGGTACAGCCGATATGACAACTACGTTGCCATCATGGGCGGCTTCCCCACCGGCCTCTCTCGCCAGTGGTTCGAT
GTGACCATGGTGTACTGCCAGTCTCAAGCGGCAGCGCACCCGGACCATGTCCGCTGGAAGATTGACCACCGGTCC
GCTCAACTGAGACTCATCACATTCGACATGTCGATGCTCTACGCCCGAGGGAGCCGCGGACAACTGTCTCCACAA
GCCTTTGCCCGGGAGCACACCAGGTTGACACAAGAGTTGCACGAGTGGAAACATACGTGGGATCCCGCCCTGACG
GACCCAAACTATCTCGTAACAGACCTCTCGTACAGAAAGGAAGCCGGCCCGGAGGATATTGTCGACCCCTACCAG
CCGGGCACTCTGTTCCACATGCCGCTCTTCACAACCACGCTCATCACCGCCGAATGGCACTCCATCGTCATCATG
CACCTGTCCCAGTCGGCCAAGACGCCGTCGCCTACCCTGCTCGCCAAGTTCAGGGAGCACGCCTACGCCGCCTGT
CAGTACTTTGAGGCCGTCGAGCGCTGGCCCGGGTGTCCGCCAGGGGCCTTGGTCTCGCTACAGCCGTGCATCTCC
ATCGCCGCGCTGTTCCTCCCGCACGACCGGCAGCATCAGATGTGGCTCCGTCGCAAATTTGCGCTGCTCGACACC
CTGGGCTTCATCCACCCAACAACCCGTCGCTTGAAAATGGCCCGTCTGTTCCGCGATCCATCGTGTTCGCGCTGG
TGGCTGCCCAACGACGAGGGCTTGACGCCCGTGCTGCAGAGCATCCGCGCCTTTGCCGACGAGCGCAATGCCGCC
GCCGTCGACGACCAGTTGGATAATATTCGCGAGGGGGCTCACGTCCGCGCCAGCAGCTCAGGGGACGGGACCCGA
GATGTGTAG
Gene >Ophio5|5850
ATGAACAACTATTTCGCCTCGGACCCGGACGAGTCGGGTTCGTCTGTAGGCACAGGCACTTCGGTGCCTTCGTCA
CTGGCTGCGCATTCGAGTCTCGAGCACATCGACGGTTTCCACGAGCCTATACTAGTTCACGCTTCCAGAACTCCC
AATGGTCGCAGGAAGCTGTCATCTGGTTTCGAGAACGGTACGGACGTCGTCAAGTATCGCAGGACAAGGTCTGGC
TGCTTCACGTGCAGGAGTCGAAGAGTCAAGGTACGTGGGAAGTCTGGGGTTTGCCCTCTAGAAAGTTGCTAACTC
GCTTCTGATGATTCAAGTGTGACGAGATACATCCCGTGTGCGAGCGTAAGAGATGGCTACACCTCCCAAAGGCCT
CATGCCACCTATTGACTCGTGAAAACAGGATGTAACAAGGGGAATCGCAAATGTGTCTACCCCGACCCTCCATCC
TTAAAGGGACCTTCGAACAAGAGTAAGACGAAAGAAGCTACTCTTTTAGCTCAGAAATCTCGCGTCAACCTTTCC
AACAGTGGCGAGGAAGACGAGATGGAAAAAGAGACGAGGCTCGAAGGCGGTCATGTCGAGGACGAGCCCGCCGAA
GCCCTCTTTCAGACACACGCTTGCTCAAAGGCACCCGTGATATGCACGAGTGCGGCACGAATGGCTTCATGTCAC
GACTCAGAGAGCTCTTCAGATGGGGCATTGAGACAGTCGTCCTCGTCCTCGCCCCCAACTGCGAATGCCAGGGCC
ATGGGAAGCCAAACGGCTTGTGCTGATGAAGCAGGAAAGAAACGGGCGGATTGGTCGCATCTGCCACTCGACTTC
CAGCACCATCTCGCATATTTCGTCACCAATATCACGAACCATCACTACAGTATAGCAAACGACGGGGATGACTTC
TTTAGCATCATCTTGCCCAGCATGGCAGTCGACCATGAGCCTCTTCTCCATGCGGTAGTGGGCTTCTCTGCCTAC
CATGCTACGTTGCAGAAGCCGGATGGGCAGCTTCAGGACTTCTTGAAGTACTACAACGGCGGTGTGACTCGCCTG
CTCGAGTCTCTACAACGCAAGGAGGCCAACAATGTGCCGGTATTAGTCACGATTCTGCAGCTGGCGACGATGGAG
GTGAGTGTGGACTAGATTTTCCTGCATGACAACGGTATAGTAACCTCCCTATTCTCTATCAGGAGTTCCTCGGCG
ACTGGGTCAACCTGATGGGACACCAAAAGGCCGCGCTCGAAATCATTACCCAAATATTCGAGCCCGGGACCGTCA
TGGACACGGCCGTGGGCAGGATGTGTCTCAACTGGTACAGCCGATATGACAACTACGTTGCCATCATGGGCGGCT
TCCCCACCGGCCTCTCTCGCCAGTGGTTCGATGTGACCATGGTGTACTGCCAGTCTCAAGCGGCAGCGCACCCGG
ACCATGTCCGCTGGAAGATTGACCACCGGTCCGCTCAACTGAGACTCATCACATTCGACATGTCGATGCTCTACG
CCCGAGGGAGCCGCGGACAACTGTCTCCACAAGCCTTTGCCCGGGAGCACACCAGGTTGACACAAGAGTTGCACG
AGTGGAAACATACGTGGGATCCCGCCCTGACGGACCCAAACTATCTCGTAACAGACCTCTCGTACAGAAAGGAAG
CCGGCCCGGAGGATATTGTCGACCCCTACCAGCCGGGCACTCTGTTCCACATGCCGCTCTTCACAACCACGCTCA
TCACCGCCGAATGGCACTCCATCGTCATCATGCACCTGTCCCAGTCGGCCAAGACGCCGTCGCCTACCCTGCTCG
CCAAGTTCAGGGAGCACGCCTACGCCGCCTGTCAGTACTTTGAGGCCGTCGAGCGCTGGCCCGGGTGTCCGCCAG
GGGCCTTGGTCTCGCTACAGCCGTGCATCTCCATCGCCGCGCTGTTCCTCCCGCACGACCGGCAGCATCAGATGT
GGCTCCGTCGCAAATTTGCGCTGCTCGACACCCTGGGGTACGTTTGAAGAGTCGTGTCTTTTTTCATTCTCACTC
ATCTTTGATAATTCGTCATCGTCCTGGTGATTGATACATACATATATATATATATATCCACACATTACACATATA
TATAACGCTCCTTTAATCCCGTCGATATTGTTAAGCAGCTAACATACCCGCCACAGCTTCATCCACCCAACAACC
CGTCGCTTGAAAATGGCCCGTCTGTTCCGCGATCCATCGTGTTCGCGCTGGTGGCTGCCCAACGACGAGGGCTTG
ACGCCCGTGCTGCAGAGCATCCGCGCCTTTGCCGACGAGCGCAATGCCGCCGCCGTCGACGACCAGTTGGATAAT
ATTCGCGAGGTGAGGCATCTGTTCGTCAAGTTGAGGCTTGGCGAGGACGGCAACGAGGCGGGGGAGAAGGACGAC
GTGCTTACGCGTTGATATGACGCGTGACAAGGGGGCTCACGTCCGCGCCAGCAGCTCAGGGGACGGGACCCGAGA
TGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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