© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5828 |
| Gene name | |
| Location | scaffold_49:23899..25353 |
| Strand | + |
| Gene length (bp) | 1454 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1278 |
| Protein length (aa) | 426 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01793 | Glyco_transf_15 | Glycolipid 2-alpha-mannosyltransferase | 1.3E-135 | 98 | 374 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P27810|KTR1_YEAST | Alpha-1,2 mannosyltransferase KTR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR1 PE=1 SV=1 | 82 | 424 | 8.0E-148 |
| sp|Q00310|MNT1_CANAL | Glycolipid 2-alpha-mannosyltransferase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MNT1 PE=3 SV=1 | 103 | 422 | 6.0E-147 |
| sp|P46592|MNT2_CANAL | Glycolipid 2-alpha-mannosyltransferase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MNT2 PE=3 SV=3 | 103 | 422 | 1.0E-143 |
| sp|P38130|KTR3_YEAST | Probable mannosyltransferase KTR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR3 PE=1 SV=1 | 101 | 420 | 6.0E-129 |
| sp|O60160|OMH1_SCHPO | O-glycoside alpha-1,2-mannosyltransferase omh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh1 PE=3 SV=1 | 100 | 421 | 7.0E-119 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P27810|KTR1_YEAST | Alpha-1,2 mannosyltransferase KTR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR1 PE=1 SV=1 | 82 | 424 | 8.0E-148 |
| sp|Q00310|MNT1_CANAL | Glycolipid 2-alpha-mannosyltransferase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MNT1 PE=3 SV=1 | 103 | 422 | 6.0E-147 |
| sp|P46592|MNT2_CANAL | Glycolipid 2-alpha-mannosyltransferase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MNT2 PE=3 SV=3 | 103 | 422 | 1.0E-143 |
| sp|P38130|KTR3_YEAST | Probable mannosyltransferase KTR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR3 PE=1 SV=1 | 101 | 420 | 6.0E-129 |
| sp|O60160|OMH1_SCHPO | O-glycoside alpha-1,2-mannosyltransferase omh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh1 PE=3 SV=1 | 100 | 421 | 7.0E-119 |
| sp|P27809|KRE2_YEAST | Glycolipid 2-alpha-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE2 PE=1 SV=1 | 106 | 422 | 4.0E-116 |
| sp|O74546|OMH3_SCHPO | O-glycoside alpha-1,2-mannosyltransferase homolog 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh3 PE=3 SV=1 | 102 | 411 | 2.0E-110 |
| sp|P26725|YUR1_YEAST | Probable mannosyltransferase YUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YUR1 PE=1 SV=1 | 103 | 417 | 2.0E-108 |
| sp|P33550|KTR2_YEAST | Probable mannosyltransferase KTR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR2 PE=3 SV=1 | 103 | 408 | 6.0E-107 |
| sp|O42944|OMH2_SCHPO | O-glycoside alpha-1,2-mannosyltransferase homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh2 PE=3 SV=1 | 92 | 419 | 2.0E-104 |
| sp|P87207|MNT3_CANAL | Probable mannosyltransferase MNT3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MNT3 PE=3 SV=1 | 7 | 412 | 2.0E-102 |
| sp|O94565|OMH4_SCHPO | O-glycoside alpha-1,2-mannosyltransferase homolog 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh4 PE=3 SV=2 | 102 | 414 | 4.0E-81 |
| sp|P38131|KTR4_YEAST | Probable mannosyltransferase KTR4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR4 PE=1 SV=1 | 82 | 394 | 8.0E-80 |
| sp|P54070|KTR6_YEAST | Mannosyltransferase KTR6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR6 PE=1 SV=1 | 106 | 422 | 1.0E-70 |
| sp|Q96WW1|OMH5_SCHPO | O-glycoside alpha-1,2-mannosyltransferase homolog 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh5 PE=3 SV=2 | 70 | 378 | 4.0E-68 |
| sp|P40504|KTR7_YEAST | Probable mannosyltransferase KTR7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR7 PE=1 SV=1 | 53 | 279 | 1.0E-39 |
| sp|P53966|KTR5_YEAST | Probable mannosyltransferase KTR5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR5 PE=1 SV=1 | 103 | 280 | 2.0E-39 |
| sp|P40504|KTR7_YEAST | Probable mannosyltransferase KTR7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR7 PE=1 SV=1 | 300 | 412 | 2.0E-21 |
| sp|P53966|KTR5_YEAST | Probable mannosyltransferase KTR5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KTR5 PE=1 SV=1 | 300 | 379 | 2.0E-21 |
| sp|Q9P4X2|OMH6_SCHPO | O-glycoside alpha-1,2-mannosyltransferase homolog 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh6 PE=3 SV=1 | 108 | 392 | 6.0E-17 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006486 | protein glycosylation | Yes |
| GO:0000030 | mannosyltransferase activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0070085 | glycosylation | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0016740 | transferase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0036211 | protein modification process | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 223.73 | 113.14 | 334.32 |
| CcL | In ants, during behavior modification | 738.25 | 281.16 | 1195.33 |
| CcD | In ants, recently dead | 455.75 | 199.53 | 711.97 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.004113 | yes |
| CcL | CcD | 0.097381 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5828 MAGGNARYLRYVAIAIFTLTFFYLFSNSRYDVAAAGRAGTPDPQPVDKEPSPPPPAKAPIHDDNQVSTVKRPPTG DAVEVPLIVSPEDPRWDKALVGTAPGPRVNATFVTLARNSDVWDISRSIRQVEDRFNRRYNYDWVFLNDKPFDDN FKKVTSSLVSGKTFYGLIPTEHWSFPDWIDQKKAERVRQDMGDRKIIYGDSVSYRHMCRFESGFFFRQPLLMNYD YYWRVEPSIELFCDIHYDPFRLMAEQGKKYSFVLSLYEYVETIKTLWDSTKKFVTNHPEHIAADNSMGFLSDDGG ETYNHCHFWSNFEIGDLNWLRSKPYLDFFESLDRDGGFFYERWGDAPVHSIAASLLLNKTDVHFFDDIGYWHVPF THCPTSEKTRLALRCHCNPKDNFDWKGYSCTSKFFELNGMEKPEGYESQKN |
| Coding | >Ophio5|5828 ATGGCTGGCGGTAACGCCCGTTACCTGCGCTACGTCGCCATCGCCATATTCACACTCACCTTTTTCTACTTGTTC TCCAACTCGCGATACGATGTCGCCGCCGCCGGTCGCGCCGGAACTCCAGACCCCCAGCCTGTCGACAAGGAACCC TCGCCTCCTCCTCCGGCCAAGGCCCCCATTCACGACGACAACCAAGTCTCCACCGTCAAGAGGCCCCCCACAGGT GACGCCGTTGAGGTTCCCCTCATCGTGAGCCCGGAGGATCCTCGATGGGACAAGGCCTTGGTCGGCACCGCTCCA GGTCCCCGTGTCAACGCCACATTTGTCACGCTCGCCCGCAACTCAGATGTATGGGACATCTCACGCTCCATCCGC CAGGTCGAGGACCGCTTCAACCGTCGGTACAACTACGACTGGGTTTTCCTCAACGACAAGCCCTTTGACGACAAC TTCAAGAAGGTCACGTCGTCGCTTGTCTCAGGCAAGACTTTTTACGGCCTGATCCCGACCGAGCACTGGTCCTTC CCCGACTGGATAGACCAGAAAAAGGCCGAAAGGGTGCGCCAAGATATGGGCGACCGTAAAATCATCTACGGCGAC TCCGTCAGCTACCGTCACATGTGTCGTTTCGAGTCGGGCTTCTTCTTCCGCCAACCGCTCCTGATGAACTACGAC TACTACTGGCGCGTCGAGCCCTCGATCGAGCTCTTCTGCGACATCCACTACGATCCATTCCGCCTCATGGCCGAG CAGGGCAAAAAGTACAGCTTCGTCCTGAGCCTCTACGAGTACGTCGAGACAATCAAGACACTGTGGGACAGCACC AAGAAGTTTGTCACGAATCACCCTGAGCATATTGCGGCCGACAACTCGATGGGCTTCTTGAGCGACGACGGCGGC GAAACGTACAATCACTGCCACTTCTGGTCCAACTTTGAGATTGGCGATCTCAACTGGCTGCGGAGCAAGCCCTAC CTCGACTTCTTCGAGTCCCTGGACCGCGACGGGGGCTTCTTCTACGAGCGCTGGGGCGACGCACCCGTCCACTCC ATCGCGGCCAGCCTACTGCTCAACAAGACCGACGTTCACTTCTTCGACGACATCGGCTACTGGCACGTGCCCTTT ACCCACTGCCCGACCAGCGAAAAGACGCGGCTGGCGCTCCGCTGCCACTGCAACCCCAAAGACAACTTTGACTGG AAGGGCTACTCATGCACATCCAAGTTCTTTGAGCTCAACGGCATGGAGAAGCCCGAAGGTTACGAGAGCCAAAAA AAC |
| Transcript | >Ophio5|5828 ATGGCTGGCGGTAACGCCCGTTACCTGCGCTACGTCGCCATCGCCATATTCACACTCACCTTTTTCTACTTGTTC TCCAACTCGCGATACGATGTCGCCGCCGCCGGTCGCGCCGGAACTCCAGACCCCCAGCCTGTCGACAAGGAACCC TCGCCTCCTCCTCCGGCCAAGGCCCCCATTCACGACGACAACCAAGTCTCCACCGTCAAGAGGCCCCCCACAGGT GACGCCGTTGAGGTTCCCCTCATCGTGAGCCCGGAGGATCCTCGATGGGACAAGGCCTTGGTCGGCACCGCTCCA GGTCCCCGTGTCAACGCCACATTTGTCACGCTCGCCCGCAACTCAGATGTATGGGACATCTCACGCTCCATCCGC CAGGTCGAGGACCGCTTCAACCGTCGGTACAACTACGACTGGGTTTTCCTCAACGACAAGCCCTTTGACGACAAC TTCAAGAAGGTCACGTCGTCGCTTGTCTCAGGCAAGACTTTTTACGGCCTGATCCCGACCGAGCACTGGTCCTTC CCCGACTGGATAGACCAGAAAAAGGCCGAAAGGGTGCGCCAAGATATGGGCGACCGTAAAATCATCTACGGCGAC TCCGTCAGCTACCGTCACATGTGTCGTTTCGAGTCGGGCTTCTTCTTCCGCCAACCGCTCCTGATGAACTACGAC TACTACTGGCGCGTCGAGCCCTCGATCGAGCTCTTCTGCGACATCCACTACGATCCATTCCGCCTCATGGCCGAG CAGGGCAAAAAGTACAGCTTCGTCCTGAGCCTCTACGAGTACGTCGAGACAATCAAGACACTGTGGGACAGCACC AAGAAGTTTGTCACGAATCACCCTGAGCATATTGCGGCCGACAACTCGATGGGCTTCTTGAGCGACGACGGCGGC GAAACGTACAATCACTGCCACTTCTGGTCCAACTTTGAGATTGGCGATCTCAACTGGCTGCGGAGCAAGCCCTAC CTCGACTTCTTCGAGTCCCTGGACCGCGACGGGGGCTTCTTCTACGAGCGCTGGGGCGACGCACCCGTCCACTCC ATCGCGGCCAGCCTACTGCTCAACAAGACCGACGTTCACTTCTTCGACGACATCGGCTACTGGCACGTGCCCTTT ACCCACTGCCCGACCAGCGAAAAGACGCGGCTGGCGCTCCGCTGCCACTGCAACCCCAAAGACAACTTTGACTGG AAGGGCTACTCATGCACATCCAAGTTCTTTGAGCTCAACGGCATGGAGAAGCCCGAAGGTTACGAGAGCCAAAAA AACTAA |
| Gene | >Ophio5|5828 ATGGCTGGCGGTAACGCCCGTTACCTGCGCTACGTCGCCATCGCCATATTCGTACGTACCCTCCACCCTCTGCTC TCTCTATAATGTCCTGCACTGCTGACAACCTTTAAAAAAAGACACTCACCTTTTTCTACTTGTTCTCCAACTCGC GATACGATGTCGCCGCCGCCGGTCGCGCCGGAACTCCAGACCCCCAGCCTGTCGACAAGGAACCCTCGCCTCCTC CTCCGGCCAAGGCCCCCATTCACGACGACAACCAAGTCTCCACCGTCAAGAGGCCCCCCACAGGTGACGCCGTTG AGGTTCCCCTCATCGTGAGCCCGGAGGATCCTCGATGGGACAAGGCCTTGGTCGGCACCGCTCCAGGTCCCCGTG TCAACGCCACATTTGTCACGCTCGCCCGCAACTCAGATGTATGGGACATCTCACGCTCCATCCGCCAGGTCGAGG ACCGCTTCAACCGTCGGTACAACTACGACTGGGTTTTCCTCAACGACAAGCCCTTTGACGACAACTTCAAGAAGG TCACGTCGTCGCTTGTCTCAGGCAAGACTTTTTACGGCCTGATCCCGACCGAGCACTGGTCCTTCCCCGACTGGA TAGACCAGAAAAAGGCCGAAAGGGTGCGCCAAGATATGGGCGACCGTAAAATCATCTACGGCGACTCCGTCAGCT ACCGTCACATGTGTCGTTTCGAGTCGGGCTTCTTCTTCCGCCAACCGCTCCTGATGAACTACGACTACTACTGGC GCGTCGAGCCCTCGATCGAGCTCTTCTGCGACATCCACTACGATCCATTCCGCCTCATGGCCGAGCAGGGCAAAA AGTACAGCTTCGTCCTGAGCCTCTACGAGTACGTCGAGACAATCAAGACACTGTGGGACAGCACCAAGAAGTTTG TCACGAATCACCCTGAGCATATTGCGGCCGACAACTCGATGGGCTTCTTGAGCGACGACGGCGGCGAAACGTACA ATCACTGCCACTTCGTGAGTCCTTGTCCCTTTTTGACCGCCCCAGTACCGGATGCTGATTTCCTCGTAGTGGTCC AACTTTGAGATTGGCGATCTCAACTGGCTGCGGAGCAAGCCCTACCTCGACTTCTTCGAGTCCCTGGACCGCGAC GGGGGCTTCTTCTACGAGCGCTGGGGCGACGCACCCGTCCACTCCATCGCGGCCAGCCTACTGCTCAACAAGACC GACGTTCACTTCTTCGACGACATCGGCTACTGGCACGTGCCCTTTACCCACTGCCCGACCAGCGAAAAGACGCGG CTGGCGCTCCGCTGCCACTGCAACCCCAAAGACAACTTTGACTGGAAGGGCTACTCATGTAAGTCGGCGAGGAGG CGGCGAATTGTTCGGCATCGACTAATATTCCGACAGGCACATCCAAGTTCTTTGAGCTCAACGGCATGGAGAAGC CCGAAGGTTACGAGAGCCAAAAAAACTAA |