Protein ID | Ophio5|5821 |
Gene name | |
Location | scaffold_49:11580..12246 |
Strand | - |
Gene length (bp) | 666 |
Transcript length (bp) | 267 |
Coding sequence length (bp) | 264 |
Protein length (aa) | 88 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09796 | QCR10 | Ubiquinol-cytochrome-c reductase complex subunit (QCR10) | 1.4E-23 | 26 | 88 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005750 | mitochondrial respiratory chain complex III | Yes |
GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | Yes |
GO:1990204 | oxidoreductase complex | No |
GO:0008150 | biological_process | No |
GO:0032991 | protein-containing complex | No |
GO:0015980 | energy derivation by oxidation of organic compounds | No |
GO:0098798 | mitochondrial protein-containing complex | No |
GO:0045333 | cellular respiration | No |
GO:0022904 | respiratory electron transport chain | No |
GO:1902494 | catalytic complex | No |
GO:0008152 | metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0009060 | aerobic respiration | No |
GO:0098796 | membrane protein complex | No |
GO:0009987 | cellular process | No |
GO:0019646 | aerobic electron transport chain | No |
GO:0005575 | cellular_component | No |
GO:0098803 | respiratory chain complex | No |
GO:0022900 | electron transport chain | No |
GO:0098800 | inner mitochondrial membrane protein complex | No |
GO:0006091 | generation of precursor metabolites and energy | No |
GO:0045275 | respiratory chain complex III | No |
GO:1902495 | transmembrane transporter complex | No |
GO:0070069 | cytochrome complex | No |
GO:1990351 | transporter complex | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.1561 | 0.1511 | 0.0492 | 0.0401 | 0.9738 | 0.0799 | 0.0827 | 0.1002 | 0.0312 | 0.1373 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 36 | 58 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 5668 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5821 MESPISRPPSFKSAYGPKYQHQPNIRGWNRTAILRLGVRAGLYGGAAGVAALLFTSGIPRIRVDIMERIPFVGRY FVKEPVNPADNPF |
Coding | >Ophio5|5821 ATGGAATCTCCCATCAGCCGCCCTCCCAGCTTCAAGAGCGCGTACGGGCCAAAGTATCAGCATCAGCCCAACATC CGCGGATGGAACAGGACTGCTATCCTGAGATTAGGCGTCAGAGCTGGTCTGTACGGTGGCGCGGCAGGCGTTGCT GCCTTGCTCTTCACGTCCGGCATCCCCCGCATTCGCGTCGACATCATGGAGCGGATCCCCTTTGTCGGCCGCTAT TTCGTCAAGGAGCCGGTTAACCCTGCGGACAATCCTTTC |
Transcript | >Ophio5|5821 ATGGAATCTCCCATCAGCCGCCCTCCCAGCTTCAAGAGCGCGTACGGGCCAAAGTATCAGCATCAGCCCAACATC CGCGGATGGAACAGGACTGCTATCCTGAGATTAGGCGTCAGAGCTGGTCTGTACGGTGGCGCGGCAGGCGTTGCT GCCTTGCTCTTCACGTCCGGCATCCCCCGCATTCGCGTCGACATCATGGAGCGGATCCCCTTTGTCGGCCGCTAT TTCGTCAAGGAGCCGGTTAACCCTGCGGACAATCCTTTCTAA |
Gene | >Ophio5|5821 ATGGAATCTCCCGTATGTCATTTGAAGCTGTCCCCGATCAATCGAAGGCCTACGAACTGAATGCGTCGCAGATCA GCCGCCCTCCCAGCTTCAAGAGCGCGTACGGGCCAAAGTACGTGAGCAACAGCGCCTCCAACACCCCTTCCCCGT TACTAGCTGCGTCGACTCCCTCAACGCCTCGATCGACCACATTTGAATCACTCGCTTGAGTCCAATGGCTCTGAC GGCTCGCCTCGCTAGGTATCAGCATCAGCCCAACATCCGCGGATGGAACAGGACTGCTATCCTGAGATTGTGAGT AGGCTTCTACGTCGTTTGAGCGGAGTCCATACGGATGCTGCAAAACACATATCACGGGCTTGGATAGTTTGGGGG TGCCACTCGCTAACCTGTCGGCATCAGAGGCGTCAGAGCTGGTCTGTACGGTGGCGCGGCAGGCGTTGCTGCCTT GCTCTTCACGTCCGGCATCCCCCGCATTCGCGTCGACATCATGGAGGTGGGTTGTCTGGCCCAAGCGAAGACGGC CACGCAAGCTGATTCGAGGCGTAGCGGATCCCCTTTGTCGGCCGCTATTTCGTCAAGGAGCCGGTTAACCCTGCG GACAATGTGAGCTTCACCAGGCTCGAGGTCTGTTTGTTTTTACTGATGAGTAGACAGCCTTTCTAA |