Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5819
Gene name
Locationscaffold_489:13716..14762
Strand+
Gene length (bp)1046
Transcript length (bp)981
Coding sequence length (bp)978
Protein length (aa) 326

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13668 Ferritin_2 Ferritin-like domain 2.5E-30 43 173

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5819
MVSIKAMVAAVVFSTTASALPAPARMSPRQAAESGAEGGQNMDTTIAEFARTLELAEGAFYKQVITQNEQNRLFS
EEEVDQMQKIFNTEDAHATQLQQVLTAANGPIIKPCKYKFDTTDRNKILQTALVLEETGQAAYLGAAPLVQDKNT
LALAGSILPVESQHATVLRGLLKMDPVPRPFSNALSPADVSTMVEPFIESCEDDTSNPLKLVPPNPQLQMQPAAE
ASGGANRAANGENGPKFLRFSIASGGSEAAGGASEKAVSQTGNVNDAKFCAFPDGTSARFVNYAEPEGCQQPDDL
VQPAMVMLTREMDVSTVIAGPMPVPM
Coding >Ophio5|5819
ATGGTTTCCATCAAGGCTATGGTGGCGGCCGTTGTCTTTTCTACAACTGCCTCTGCCCTACCTGCTCCGGCGAGG
ATGAGTCCCCGGCAAGCGGCCGAGAGTGGTGCCGAGGGGGGACAGAACATGGACACGACGATAGCAGAATTCGCT
CGCACCCTGGAACTGGCCGAGGGCGCATTCTATAAGCAAGTCATCACACAGAACGAACAAAACCGGCTTTTCAGC
GAGGAAGAGGTGGATCAAATGCAAAAGATCTTCAACACCGAGGACGCACACGCCACTCAGCTGCAACAGGTCCTG
ACGGCAGCCAATGGTCCCATCATCAAGCCGTGCAAGTACAAGTTTGACACGACGGACCGCAACAAGATTCTGCAG
ACGGCGCTCGTGCTGGAGGAGACGGGCCAAGCCGCTTATCTCGGCGCCGCTCCCTTGGTTCAAGACAAGAACACT
CTGGCGCTGGCCGGCTCCATCCTGCCCGTCGAGTCGCAGCACGCCACCGTCTTGCGCGGCCTTCTCAAGATGGAT
CCTGTGCCGAGACCGTTCTCCAACGCGCTGAGCCCGGCGGACGTGTCTACCATGGTGGAGCCCTTCATCGAGAGC
TGCGAGGACGACACGTCCAACCCTCTCAAGCTGGTGCCTCCCAACCCGCAGCTGCAGATGCAGCCGGCGGCCGAG
GCCAGCGGAGGCGCGAACCGAGCAGCCAACGGCGAGAACGGACCCAAGTTCCTGCGGTTTTCCATCGCCAGCGGC
GGATCGGAAGCGGCCGGTGGCGCGTCGGAGAAGGCAGTTTCGCAAACCGGCAACGTCAACGACGCAAAGTTCTGC
GCCTTCCCCGATGGTACTTCGGCCCGTTTTGTCAATTATGCCGAGCCTGAAGGCTGCCAGCAGCCGGACGACCTG
GTTCAGCCGGCCATGGTGATGCTGACGAGAGAAATGGATGTGTCGACGGTGATTGCGGGCCCCATGCCGGTACCG
ATG
Transcript >Ophio5|5819
ATGGTTTCCATCAAGGCTATGGTGGCGGCCGTTGTCTTTTCTACAACTGCCTCTGCCCTACCTGCTCCGGCGAGG
ATGAGTCCCCGGCAAGCGGCCGAGAGTGGTGCCGAGGGGGGACAGAACATGGACACGACGATAGCAGAATTCGCT
CGCACCCTGGAACTGGCCGAGGGCGCATTCTATAAGCAAGTCATCACACAGAACGAACAAAACCGGCTTTTCAGC
GAGGAAGAGGTGGATCAAATGCAAAAGATCTTCAACACCGAGGACGCACACGCCACTCAGCTGCAACAGGTCCTG
ACGGCAGCCAATGGTCCCATCATCAAGCCGTGCAAGTACAAGTTTGACACGACGGACCGCAACAAGATTCTGCAG
ACGGCGCTCGTGCTGGAGGAGACGGGCCAAGCCGCTTATCTCGGCGCCGCTCCCTTGGTTCAAGACAAGAACACT
CTGGCGCTGGCCGGCTCCATCCTGCCCGTCGAGTCGCAGCACGCCACCGTCTTGCGCGGCCTTCTCAAGATGGAT
CCTGTGCCGAGACCGTTCTCCAACGCGCTGAGCCCGGCGGACGTGTCTACCATGGTGGAGCCCTTCATCGAGAGC
TGCGAGGACGACACGTCCAACCCTCTCAAGCTGGTGCCTCCCAACCCGCAGCTGCAGATGCAGCCGGCGGCCGAG
GCCAGCGGAGGCGCGAACCGAGCAGCCAACGGCGAGAACGGACCCAAGTTCCTGCGGTTTTCCATCGCCAGCGGC
GGATCGGAAGCGGCCGGTGGCGCGTCGGAGAAGGCAGTTTCGCAAACCGGCAACGTCAACGACGCAAAGTTCTGC
GCCTTCCCCGATGGTACTTCGGCCCGTTTTGTCAATTATGCCGAGCCTGAAGGCTGCCAGCAGCCGGACGACCTG
GTTCAGCCGGCCATGGTGATGCTGACGAGAGAAATGGATGTGTCGACGGTGATTGCGGGCCCCATGCCGGTACCG
ATGTAA
Gene >Ophio5|5819
ATGGTTTCCATCAAGGCTATGGTGGCGGCCGTTGTCTTTTCTACAACTGCCTCTGCCCTACCTGCTCCGGCGAGG
ATGAGTCCCCGGCAAGCGGCCGAGAGTGGTGCCGAGGGGGGACAGAACATGGACACGACGATAGCAGAATTGTGA
GTTTTTTTTTTGGTTTTTTTTTTTTTGCCACAAGGGCTCGAGCTGACTTTAGTCTTGTTAGCGCTCGCACCCTGG
AACTGGCCGAGGGCGCATTCTATAAGCAAGTCATCACACAGAACGAACAAAACCGGCTTTTCAGCGAGGAAGAGG
TGGATCAAATGCAAAAGATCTTCAACACCGAGGACGCACACGCCACTCAGCTGCAACAGGTCCTGACGGCAGCCA
ATGGTCCCATCATCAAGCCGTGCAAGTACAAGTTTGACACGACGGACCGCAACAAGATTCTGCAGACGGCGCTCG
TGCTGGAGGAGACGGGCCAAGCCGCTTATCTCGGCGCCGCTCCCTTGGTTCAAGACAAGAACACTCTGGCGCTGG
CCGGCTCCATCCTGCCCGTCGAGTCGCAGCACGCCACCGTCTTGCGCGGCCTTCTCAAGATGGATCCTGTGCCGA
GACCGTTCTCCAACGCGCTGAGCCCGGCGGACGTGTCTACCATGGTGGAGCCCTTCATCGAGAGCTGCGAGGACG
ACACGTCCAACCCTCTCAAGCTGGTGCCTCCCAACCCGCAGCTGCAGATGCAGCCGGCGGCCGAGGCCAGCGGAG
GCGCGAACCGAGCAGCCAACGGCGAGAACGGACCCAAGTTCCTGCGGTTTTCCATCGCCAGCGGCGGATCGGAAG
CGGCCGGTGGCGCGTCGGAGAAGGCAGTTTCGCAAACCGGCAACGTCAACGACGCAAAGTTCTGCGCCTTCCCCG
ATGGTACTTCGGCCCGTTTTGTCAATTATGCCGAGCCTGAAGGCTGCCAGCAGCCGGACGACCTGGTTCAGCCGG
CCATGGTGATGCTGACGAGAGAAATGGATGTGTCGACGGTGATTGCGGGCCCCATGCCGGTACCGATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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