Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5799
Gene name
Locationscaffold_486:11318..12854
Strand-
Gene length (bp)1536
Transcript length (bp)1536
Coding sequence length (bp)1533
Protein length (aa) 511

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05238 CENP-N Kinetochore protein CHL4 like 9.1E-127 21 501

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9C0W0|MIS15_SCHPO Kinetochore protein mis15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mis15 PE=1 SV=3 9 503 2.0E-17
sp|P38907|CHL4_YEAST Central kinetochore subunit CHL4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHL4 PE=1 SV=1 92 322 8.0E-12

GO

GO Term Description Terminal node
GO:0051382 kinetochore assembly Yes
GO:0007059 chromosome segregation Yes
GO:0043933 protein-containing complex organization No
GO:0009987 cellular process No
GO:0022607 cellular component assembly No
GO:0006996 organelle organization No
GO:0071840 cellular component organization or biogenesis No
GO:0051383 kinetochore organization No
GO:0070925 organelle assembly No
GO:0016043 cellular component organization No
GO:0051276 chromosome organization No
GO:0140694 non-membrane-bounded organelle assembly No
GO:0008150 biological_process No
GO:0065003 protein-containing complex assembly No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.372 0.8255 0.1186 0.0092 0.2898 0.0088 0.0607 0.061 0.0475 0.044

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 79.52 43.33 115.72
CcL In ants, during behavior modification 88.11 47.51 128.71
CcD In ants, recently dead 60.14 32.87 87.41

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.697813 no
SC16a CcD 0.228095 no
CcL CcD 0.082910 no

Orthologs

Orthofinder run ID4
Orthogroup4638
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2181
Ophiocordyceps australis map64 (Brazil) OphauB2|1013
Ophiocordyceps camponoti-floridani Ophcf2|05691
Ophiocordyceps camponoti-rufipedis Ophun1|2067
Ophiocordyceps kimflemingae Ophio5|5799 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9736

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5799
MARLSVPTKGRLPSSLRVDATNRAVVKSLGRLSRDALLSIALDWLDEANLPNAAPYIDDADSAVDYDDHDHLYPP
CRSLADLRQLYQEMQSQKGSKRDVISRILEGDWRHGVTLYQLAMVDCAHLDDHPTSQKWTAYAILPLKLPSAEQG
DDEPLKPDKESLTIPRFHPSTFVQNLQQHVLPDVKAHYHFYRPRDYPVLLLRIFVIDSPYTTALALSNPAADFAS
SRTIYLAFPDGSPSLYITRSQTTGPISLGESKSLHGLIVNGVPKALSRPRQRFVLRPTNLSTRNLWALLDRRGGG
RGNAAAAGWSIYADERLRNSPLDTRLPPDSRWAGAKPSGSDVVASRRRPPPAEPAREVKRARVVAQARFADEALV
TDGKGVERVDILMQDPFPADDGLPPDLDPDTTDAAAQDQDARHQRAQDRRRSKMEAVLQQARDDDDDVADEADAS
QWTPALRLSFQGPHVFAGIRQLVEAGIVDGERMPGWMTGEEGVTTGVVRHGRIRGYKGAGL
Coding >Ophio5|5799
ATGGCCCGTCTCTCCGTCCCCACCAAGGGCCGGCTGCCGTCTTCCCTCCGCGTCGATGCCACCAACCGGGCGGTG
GTGAAGAGCCTGGGCCGGCTCTCGCGCGATGCGCTGCTCTCCATCGCCCTCGACTGGCTGGATGAGGCCAACCTG
CCCAACGCGGCGCCGTATATCGACGATGCAGACTCGGCCGTCGACTATGATGACCACGATCATCTTTATCCGCCT
TGCCGCTCTCTCGCCGACCTCCGCCAGCTGTATCAGGAAATGCAGTCTCAAAAGGGCTCCAAGCGCGACGTTATC
AGTCGCATCCTTGAGGGAGACTGGCGCCATGGTGTGACGCTGTATCAGCTCGCTATGGTCGACTGCGCACATCTG
GACGACCATCCCACCTCTCAGAAATGGACAGCCTATGCTATCCTCCCACTCAAGCTTCCCTCGGCCGAACAGGGT
GACGACGAGCCGCTCAAGCCCGACAAGGAGAGCCTGACTATCCCCCGCTTTCACCCCTCGACGTTTGTGCAGAAC
CTACAGCAACACGTCCTCCCCGACGTCAAGGCTCATTATCATTTCTATCGCCCGCGGGACTATCCTGTCCTGCTC
CTACGCATCTTCGTCATCGATTCACCATACACCACCGCTCTAGCACTATCCAACCCAGCCGCCGACTTCGCCTCC
TCCCGGACCATCTACCTCGCCTTCCCCGACGGCTCGCCCTCGCTGTACATCACCCGCTCGCAGACCACCGGCCCC
ATCAGCCTTGGCGAGTCCAAGAGCCTGCATGGGCTCATCGTCAACGGCGTGCCGAAAGCACTGTCGCGGCCGCGG
CAACGCTTCGTCCTCAGGCCTACCAATCTCTCCACTCGCAATTTGTGGGCGCTGTTGGACAGGCGCGGCGGCGGT
CGGGGGAACGCAGCCGCCGCCGGCTGGAGCATCTACGCAGACGAACGCCTCAGGAACTCGCCCCTCGATACTCGG
CTTCCCCCAGACTCGCGCTGGGCAGGCGCCAAACCGTCGGGCTCCGACGTCGTCGCTTCGAGAAGGCGCCCGCCG
CCGGCGGAGCCAGCCCGGGAGGTGAAGCGCGCCAGGGTTGTCGCGCAGGCTCGCTTCGCCGACGAAGCCTTGGTC
ACGGATGGCAAGGGCGTAGAAAGGGTCGACATACTGATGCAAGATCCGTTCCCTGCCGACGACGGCCTGCCCCCG
GATCTCGATCCGGACACGACGGATGCCGCCGCCCAGGACCAAGATGCCCGCCACCAACGGGCCCAGGACCGGAGA
CGCAGCAAGATGGAGGCCGTGCTGCAGCAGGCTCGTGACGATGACGACGATGTCGCCGACGAGGCAGACGCGTCA
CAGTGGACACCGGCCTTGCGGCTGTCCTTTCAAGGCCCGCACGTCTTTGCGGGAATCAGGCAGCTCGTCGAGGCC
GGCATCGTCGACGGCGAGCGGATGCCCGGGTGGATGACTGGTGAAGAGGGGGTGACGACGGGTGTGGTGAGGCAC
GGTCGCATCAGGGGCTACAAAGGAGCAGGCCTG
Transcript >Ophio5|5799
ATGGCCCGTCTCTCCGTCCCCACCAAGGGCCGGCTGCCGTCTTCCCTCCGCGTCGATGCCACCAACCGGGCGGTG
GTGAAGAGCCTGGGCCGGCTCTCGCGCGATGCGCTGCTCTCCATCGCCCTCGACTGGCTGGATGAGGCCAACCTG
CCCAACGCGGCGCCGTATATCGACGATGCAGACTCGGCCGTCGACTATGATGACCACGATCATCTTTATCCGCCT
TGCCGCTCTCTCGCCGACCTCCGCCAGCTGTATCAGGAAATGCAGTCTCAAAAGGGCTCCAAGCGCGACGTTATC
AGTCGCATCCTTGAGGGAGACTGGCGCCATGGTGTGACGCTGTATCAGCTCGCTATGGTCGACTGCGCACATCTG
GACGACCATCCCACCTCTCAGAAATGGACAGCCTATGCTATCCTCCCACTCAAGCTTCCCTCGGCCGAACAGGGT
GACGACGAGCCGCTCAAGCCCGACAAGGAGAGCCTGACTATCCCCCGCTTTCACCCCTCGACGTTTGTGCAGAAC
CTACAGCAACACGTCCTCCCCGACGTCAAGGCTCATTATCATTTCTATCGCCCGCGGGACTATCCTGTCCTGCTC
CTACGCATCTTCGTCATCGATTCACCATACACCACCGCTCTAGCACTATCCAACCCAGCCGCCGACTTCGCCTCC
TCCCGGACCATCTACCTCGCCTTCCCCGACGGCTCGCCCTCGCTGTACATCACCCGCTCGCAGACCACCGGCCCC
ATCAGCCTTGGCGAGTCCAAGAGCCTGCATGGGCTCATCGTCAACGGCGTGCCGAAAGCACTGTCGCGGCCGCGG
CAACGCTTCGTCCTCAGGCCTACCAATCTCTCCACTCGCAATTTGTGGGCGCTGTTGGACAGGCGCGGCGGCGGT
CGGGGGAACGCAGCCGCCGCCGGCTGGAGCATCTACGCAGACGAACGCCTCAGGAACTCGCCCCTCGATACTCGG
CTTCCCCCAGACTCGCGCTGGGCAGGCGCCAAACCGTCGGGCTCCGACGTCGTCGCTTCGAGAAGGCGCCCGCCG
CCGGCGGAGCCAGCCCGGGAGGTGAAGCGCGCCAGGGTTGTCGCGCAGGCTCGCTTCGCCGACGAAGCCTTGGTC
ACGGATGGCAAGGGCGTAGAAAGGGTCGACATACTGATGCAAGATCCGTTCCCTGCCGACGACGGCCTGCCCCCG
GATCTCGATCCGGACACGACGGATGCCGCCGCCCAGGACCAAGATGCCCGCCACCAACGGGCCCAGGACCGGAGA
CGCAGCAAGATGGAGGCCGTGCTGCAGCAGGCTCGTGACGATGACGACGATGTCGCCGACGAGGCAGACGCGTCA
CAGTGGACACCGGCCTTGCGGCTGTCCTTTCAAGGCCCGCACGTCTTTGCGGGAATCAGGCAGCTCGTCGAGGCC
GGCATCGTCGACGGCGAGCGGATGCCCGGGTGGATGACTGGTGAAGAGGGGGTGACGACGGGTGTGGTGAGGCAC
GGTCGCATCAGGGGCTACAAAGGAGCAGGCCTGTGA
Gene >Ophio5|5799
ATGGCCCGTCTCTCCGTCCCCACCAAGGGCCGGCTGCCGTCTTCCCTCCGCGTCGATGCCACCAACCGGGCGGTG
GTGAAGAGCCTGGGCCGGCTCTCGCGCGATGCGCTGCTCTCCATCGCCCTCGACTGGCTGGATGAGGCCAACCTG
CCCAACGCGGCGCCGTATATCGACGATGCAGACTCGGCCGTCGACTATGATGACCACGATCATCTTTATCCGCCT
TGCCGCTCTCTCGCCGACCTCCGCCAGCTGTATCAGGAAATGCAGTCTCAAAAGGGCTCCAAGCGCGACGTTATC
AGTCGCATCCTTGAGGGAGACTGGCGCCATGGTGTGACGCTGTATCAGCTCGCTATGGTCGACTGCGCACATCTG
GACGACCATCCCACCTCTCAGAAATGGACAGCCTATGCTATCCTCCCACTCAAGCTTCCCTCGGCCGAACAGGGT
GACGACGAGCCGCTCAAGCCCGACAAGGAGAGCCTGACTATCCCCCGCTTTCACCCCTCGACGTTTGTGCAGAAC
CTACAGCAACACGTCCTCCCCGACGTCAAGGCTCATTATCATTTCTATCGCCCGCGGGACTATCCTGTCCTGCTC
CTACGCATCTTCGTCATCGATTCACCATACACCACCGCTCTAGCACTATCCAACCCAGCCGCCGACTTCGCCTCC
TCCCGGACCATCTACCTCGCCTTCCCCGACGGCTCGCCCTCGCTGTACATCACCCGCTCGCAGACCACCGGCCCC
ATCAGCCTTGGCGAGTCCAAGAGCCTGCATGGGCTCATCGTCAACGGCGTGCCGAAAGCACTGTCGCGGCCGCGG
CAACGCTTCGTCCTCAGGCCTACCAATCTCTCCACTCGCAATTTGTGGGCGCTGTTGGACAGGCGCGGCGGCGGT
CGGGGGAACGCAGCCGCCGCCGGCTGGAGCATCTACGCAGACGAACGCCTCAGGAACTCGCCCCTCGATACTCGG
CTTCCCCCAGACTCGCGCTGGGCAGGCGCCAAACCGTCGGGCTCCGACGTCGTCGCTTCGAGAAGGCGCCCGCCG
CCGGCGGAGCCAGCCCGGGAGGTGAAGCGCGCCAGGGTTGTCGCGCAGGCTCGCTTCGCCGACGAAGCCTTGGTC
ACGGATGGCAAGGGCGTAGAAAGGGTCGACATACTGATGCAAGATCCGTTCCCTGCCGACGACGGCCTGCCCCCG
GATCTCGATCCGGACACGACGGATGCCGCCGCCCAGGACCAAGATGCCCGCCACCAACGGGCCCAGGACCGGAGA
CGCAGCAAGATGGAGGCCGTGCTGCAGCAGGCTCGTGACGATGACGACGATGTCGCCGACGAGGCAGACGCGTCA
CAGTGGACACCGGCCTTGCGGCTGTCCTTTCAAGGCCCGCACGTCTTTGCGGGAATCAGGCAGCTCGTCGAGGCC
GGCATCGTCGACGGCGAGCGGATGCCCGGGTGGATGACTGGTGAAGAGGGGGTGACGACGGGTGTGGTGAGGCAC
GGTCGCATCAGGGGCTACAAAGGAGCAGGCCTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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