Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5771
Gene name
Locationscaffold_482:10996..12479
Strand+
Gene length (bp)1483
Transcript length (bp)1290
Coding sequence length (bp)1287
Protein length (aa) 429

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

Domain # Start End Length
1 374 396 22
2 401 423 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5771
MAFDGVTRLRQQPTCPGGGEERLQSEFFFVFFSLPFLRTTSSPYEHGGRTLDAAMWWGMGITDTAKLSRSGRRVF
LHKADELLARLERVRERAAGRAEPGAVAVAMVEKEKEKEKEEEEEEEEEGEVNGTMSMDNEMNGTTTKVSNLGKT
SRDDKAEETRQTQMQDDRLDGPELNKPKHTLTQDAEVGETKQTTMMQVSSYQTHLDSRQDHVCQQAADQRSPESS
KLSPAREAGHVLLSPWPETFAGRLETYLDAMDSDQSKDDGPDQLAMTPSHLGRLDEDIGQVAHLRASLLESISQL
DRRRTCHSDRWKRAGGAADVAALMKSRGLGSLLARTADTYQDQPPRDEWEDWSSPRSGRSRLRGAEQYYGGAPII
IIIIFFFFIIFFFFIIILFFFFLFFFFIFFIFLIIIIIIIIIVFFFFFLQSRVS
Coding >Ophio5|5771
ATGGCTTTTGATGGCGTCACGCGGCTTCGTCAACAGCCCACCTGCCCCGGTGGTGGTGAAGAGCGGCTTCAGTCA
GAGTTTTTTTTTGTTTTTTTTTCCCTTCCCTTCCTTCGGACGACATCATCACCTTATGAGCACGGCGGCAGGACC
CTCGACGCGGCCATGTGGTGGGGGATGGGAATCACCGACACGGCGAAGCTGTCGAGAAGCGGGAGGCGAGTGTTT
CTGCATAAGGCGGATGAACTGCTGGCCAGGTTGGAGAGGGTGAGGGAGAGGGCTGCGGGGAGAGCTGAGCCGGGA
GCTGTTGCGGTTGCCATGGTTGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGT
GAAGTGAACGGGACGATGAGCATGGACAACGAGATGAACGGAACGACGACCAAAGTTTCGAACCTTGGCAAGACG
AGCCGAGACGACAAGGCCGAGGAAACAAGGCAGACACAGATGCAAGACGACAGGCTAGACGGACCAGAGCTGAAC
AAGCCGAAGCATACGCTGACGCAAGACGCCGAGGTTGGGGAGACGAAGCAGACAACCATGATGCAAGTGTCGTCG
TATCAGACGCATCTCGACAGTCGCCAAGACCACGTCTGCCAACAAGCTGCCGACCAACGAAGCCCAGAGAGCAGC
AAGCTTTCCCCAGCGAGGGAAGCCGGCCACGTCCTCCTTTCGCCATGGCCAGAGACATTCGCCGGCCGACTTGAG
ACCTACCTCGACGCCATGGACTCGGACCAATCCAAAGACGACGGACCCGACCAACTGGCCATGACGCCATCTCAC
CTCGGCCGACTCGACGAAGACATCGGTCAAGTAGCCCACCTTCGGGCGAGCCTGCTAGAGAGCATCAGCCAGCTC
GACAGACGGCGTACCTGCCACTCTGACCGCTGGAAGCGTGCCGGTGGCGCCGCCGACGTCGCCGCCCTCATGAAG
AGCCGTGGTCTGGGTAGCTTGTTGGCCCGGACCGCGGATACGTACCAAGACCAGCCGCCGCGAGATGAATGGGAA
GACTGGTCGTCTCCTCGTTCGGGCCGGTCGAGGCTACGGGGTGCAGAGCAATACTACGGGGGTGCTCCCATCATC
ATCATCATCATCTTCTTCTTCTTCATCATCTTCTTCTTCTTCATCATCATCTTGTTCTTCTTCTTCCTCTTCTTC
TTCTTCATCTTCTTCATCTTCCTCATCATCATCATCATCATCATCATCATCGTCTTCTTCTTCTTCTTCTTGCAG
TCCCGTGTTTCA
Transcript >Ophio5|5771
ATGGCTTTTGATGGCGTCACGCGGCTTCGTCAACAGCCCACCTGCCCCGGTGGTGGTGAAGAGCGGCTTCAGTCA
GAGTTTTTTTTTGTTTTTTTTTCCCTTCCCTTCCTTCGGACGACATCATCACCTTATGAGCACGGCGGCAGGACC
CTCGACGCGGCCATGTGGTGGGGGATGGGAATCACCGACACGGCGAAGCTGTCGAGAAGCGGGAGGCGAGTGTTT
CTGCATAAGGCGGATGAACTGCTGGCCAGGTTGGAGAGGGTGAGGGAGAGGGCTGCGGGGAGAGCTGAGCCGGGA
GCTGTTGCGGTTGCCATGGTTGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGT
GAAGTGAACGGGACGATGAGCATGGACAACGAGATGAACGGAACGACGACCAAAGTTTCGAACCTTGGCAAGACG
AGCCGAGACGACAAGGCCGAGGAAACAAGGCAGACACAGATGCAAGACGACAGGCTAGACGGACCAGAGCTGAAC
AAGCCGAAGCATACGCTGACGCAAGACGCCGAGGTTGGGGAGACGAAGCAGACAACCATGATGCAAGTGTCGTCG
TATCAGACGCATCTCGACAGTCGCCAAGACCACGTCTGCCAACAAGCTGCCGACCAACGAAGCCCAGAGAGCAGC
AAGCTTTCCCCAGCGAGGGAAGCCGGCCACGTCCTCCTTTCGCCATGGCCAGAGACATTCGCCGGCCGACTTGAG
ACCTACCTCGACGCCATGGACTCGGACCAATCCAAAGACGACGGACCCGACCAACTGGCCATGACGCCATCTCAC
CTCGGCCGACTCGACGAAGACATCGGTCAAGTAGCCCACCTTCGGGCGAGCCTGCTAGAGAGCATCAGCCAGCTC
GACAGACGGCGTACCTGCCACTCTGACCGCTGGAAGCGTGCCGGTGGCGCCGCCGACGTCGCCGCCCTCATGAAG
AGCCGTGGTCTGGGTAGCTTGTTGGCCCGGACCGCGGATACGTACCAAGACCAGCCGCCGCGAGATGAATGGGAA
GACTGGTCGTCTCCTCGTTCGGGCCGGTCGAGGCTACGGGGTGCAGAGCAATACTACGGGGGTGCTCCCATCATC
ATCATCATCATCTTCTTCTTCTTCATCATCTTCTTCTTCTTCATCATCATCTTGTTCTTCTTCTTCCTCTTCTTC
TTCTTCATCTTCTTCATCTTCCTCATCATCATCATCATCATCATCATCATCGTCTTCTTCTTCTTCTTCTTGCAG
TCCCGTGTTTCATAG
Gene >Ophio5|5771
ATGGCTTTTGATGGCGTCACGCGGCTTCGTCAACAGCCGTCAGTCACTCTCGTGTTGTTTGCGCATGAGGCAGGC
AAACGGCGCTCAGCACCTGCCCCGGTGGTGGTGAAGAGCGGCTTCAGTCAGAGGCACGTTTGTGAGGCCGTCTCC
GTCTCTTTTTTTCTGTTGGCTCTATGCTAGTTTCTTCGGGACGATATGACTAGATTCCTCTGACGCCATCAGTAG
TTTTTTTTTGTTTTTTTTTCCCTTCCCTTCCTTCGGACGACATCATCACCTTATGAGCACGGCGGCAGGACCCTC
GACGCGGCCATGTGGTGGGGGATGGGAATCACCGACACGGCGAAGCTGTCGAGAAGCGGGAGGCGAGTGTTTCTG
CATAAGGCGGATGAACTGCTGGCCAGGTTGGAGAGGGTGAGGGAGAGGGCTGCGGGGAGAGCTGAGCCGGGAGCT
GTTGCGGTTGCCATGGTTGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGTGAA
GTGAACGGGACGATGAGCATGGACAACGAGATGAACGGAACGACGACCAAAGTTTCGAACCTTGGCAAGACGAGC
CGAGACGACAAGGCCGAGGAAACAAGGCAGACACAGATGCAAGACGACAGGCTAGACGGACCAGAGCTGAACAAG
CCGAAGCATACGCTGACGCAAGACGCCGAGGTTGGGGAGACGAAGCAGACAACCATGATGCAAGTGTCGTCGTAT
CAGACGCATCTCGACAGTCGCCAAGACCACGTCTGCCAACAAGCTGCCGACCAACGAAGCCCAGAGAGCAGCAAG
CTTTCCCCAGCGAGGGAAGCCGGCCACGTCCTCCTTTCGCCATGGCCAGAGACATTCGCCGGCCGACTTGAGACC
TACCTCGACGCCATGGACTCGGACCAATCCAAAGACGACGGACCCGACCAACTGGCCATGACGCCATCTCACCTC
GGCCGACTCGACGAAGACATCGGTCAAGTAGCCCACCTTCGGGCGAGCCTGCTAGAGAGCATCAGCCAGCTCGAC
AGACGGCGTACCTGCCACTCTGACCGCTGGAAGCGTGCCGGTGGCGCCGCCGACGTCGCCGCCCTCATGAAGAGC
CGTGGTCTGGGTAGCTTGTTGGCCCGGACCGCGGATACGTACCAAGACCAGCCGCCGCGAGATGAATGGGAAGAC
TGGTCGTCTCCTCGTTCGGGCCGGTCGAGGCTACGGGGTGCAGAGCAATACTACGGGGGTAGTGACTGGGCTAAG
AGCGATAGAAACGTCTCCTGGTGATACAGGTGCTCCCATCATCATCATCATCATCTTCTTCTTCTTCATCATCTT
CTTCTTCTTCATCATCATCTTGTTCTTCTTCTTCCTCTTCTTCTTCTTCATCTTCTTCATCTTCCTCATCATCAT
CATCATCATCATCATCATCGTCTTCTTCTTCTTCTTCTTGCAGTCCCGTGTTTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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