Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|5760
Gene name
Location	scaffold_480:10045..10822
Strand	+
Gene length (bp)	777
Transcript length (bp)	777
Coding sequence length (bp)	774
Protein length (aa)	258

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10181	PIG-H	GPI-GlcNAc transferase complex, PIG-H component	2.3E-27	161	226

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9Y7L7\|GPI15_SCHPO	Phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi15 PE=3 SV=1	159	240	3.0E-16
sp\|Q5M9N4\|PIGH_MOUSE	Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Mus musculus GN=Pigh PE=2 SV=1	159	251	4.0E-08
sp\|Q14442\|PIGH_HUMAN	Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Homo sapiens GN=PIGH PE=1 SV=1	159	251	2.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	92	114	22
2	134	153	19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	11.83	3.53	20.12
CcL	In ants, during behavior modification	11.90	3.67	20.12
CcD	In ants, recently dead	15.74	5.39	26.10

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.993392	no
SC16a	CcD	0.443265	no
CcL	CcD	0.452557	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|5760 MRLVDSGRASPLTFDLSPFTLQIVASVSPNQLLAAIAHASTTTLSIPDMLFTTPPRLHIRRPSPTAAEFIVTTRP SPPATLLSLRLLLRLPLLLLRFGLGLAALLLLYTHWAANFPDLAPPALGFLLLDRHDVLAIPLPVLLPAALATLW LVCRRLYAQESLLVLRGLGVQTTEQSPSYLARSATRFIPTEKIQDIFINEAFRGFEVRYYLVVVVEGEPDVVVVF PGLLPPRHIVEAVWRGARECLYEGRAEDKGLSL
Coding	>Ophio5\|5760 ATGCGGCTTGTCGACAGCGGACGGGCCTCACCTTTGACCTTTGACCTTTCACCTTTCACCTTGCAAATCGTTGCG TCTGTCTCTCCCAACCAACTCCTTGCTGCAATCGCCCACGCCTCAACCACCACTCTATCTATACCCGATATGCTC TTCACCACCCCTCCTCGCCTCCACATCCGCCGCCCCTCCCCCACCGCCGCCGAATTCATCGTCACCACCCGTCCT TCACCGCCCGCTACCCTCCTCTCCCTCCGGCTCCTCCTCCGGCTCCCCCTTCTCCTCCTCCGATTCGGTCTCGGT CTCGCCGCCCTACTCCTCCTCTACACCCACTGGGCCGCTAACTTTCCCGACCTCGCGCCCCCGGCCCTCGGCTTT CTCCTCCTCGACCGACACGACGTCCTCGCTATCCCCCTACCCGTCCTGCTGCCCGCCGCCCTCGCGACCCTGTGG CTCGTCTGTCGACGGCTGTACGCACAGGAATCGCTGCTTGTCCTGCGCGGGCTCGGCGTCCAGACAACGGAGCAG TCGCCGTCTTACTTGGCTCGTTCCGCTACGCGCTTTATCCCCACCGAGAAGATTCAGGACATCTTCATCAACGAG GCCTTCCGCGGATTCGAGGTGCGCTACTACCTCGTCGTCGTTGTCGAGGGCGAGCCGGATGTCGTCGTCGTCTTT CCGGGACTCCTGCCCCCGAGGCATATCGTCGAGGCCGTCTGGAGGGGGGCTCGGGAGTGCCTCTACGAGGGCCGG GCCGAGGACAAGGGGTTGTCGCTA
Transcript	>Ophio5\|5760 ATGCGGCTTGTCGACAGCGGACGGGCCTCACCTTTGACCTTTGACCTTTCACCTTTCACCTTGCAAATCGTTGCG TCTGTCTCTCCCAACCAACTCCTTGCTGCAATCGCCCACGCCTCAACCACCACTCTATCTATACCCGATATGCTC TTCACCACCCCTCCTCGCCTCCACATCCGCCGCCCCTCCCCCACCGCCGCCGAATTCATCGTCACCACCCGTCCT TCACCGCCCGCTACCCTCCTCTCCCTCCGGCTCCTCCTCCGGCTCCCCCTTCTCCTCCTCCGATTCGGTCTCGGT CTCGCCGCCCTACTCCTCCTCTACACCCACTGGGCCGCTAACTTTCCCGACCTCGCGCCCCCGGCCCTCGGCTTT CTCCTCCTCGACCGACACGACGTCCTCGCTATCCCCCTACCCGTCCTGCTGCCCGCCGCCCTCGCGACCCTGTGG CTCGTCTGTCGACGGCTGTACGCACAGGAATCGCTGCTTGTCCTGCGCGGGCTCGGCGTCCAGACAACGGAGCAG TCGCCGTCTTACTTGGCTCGTTCCGCTACGCGCTTTATCCCCACCGAGAAGATTCAGGACATCTTCATCAACGAG GCCTTCCGCGGATTCGAGGTGCGCTACTACCTCGTCGTCGTTGTCGAGGGCGAGCCGGATGTCGTCGTCGTCTTT CCGGGACTCCTGCCCCCGAGGCATATCGTCGAGGCCGTCTGGAGGGGGGCTCGGGAGTGCCTCTACGAGGGCCGG GCCGAGGACAAGGGGTTGTCGCTATAG
Gene	>Ophio5\|5760 ATGCGGCTTGTCGACAGCGGACGGGCCTCACCTTTGACCTTTGACCTTTCACCTTTCACCTTGCAAATCGTTGCG TCTGTCTCTCCCAACCAACTCCTTGCTGCAATCGCCCACGCCTCAACCACCACTCTATCTATACCCGATATGCTC TTCACCACCCCTCCTCGCCTCCACATCCGCCGCCCCTCCCCCACCGCCGCCGAATTCATCGTCACCACCCGTCCT TCACCGCCCGCTACCCTCCTCTCCCTCCGGCTCCTCCTCCGGCTCCCCCTTCTCCTCCTCCGATTCGGTCTCGGT CTCGCCGCCCTACTCCTCCTCTACACCCACTGGGCCGCTAACTTTCCCGACCTCGCGCCCCCGGCCCTCGGCTTT CTCCTCCTCGACCGACACGACGTCCTCGCTATCCCCCTACCCGTCCTGCTGCCCGCCGCCCTCGCGACCCTGTGG CTCGTCTGTCGACGGCTGTACGCACAGGAATCGCTGCTTGTCCTGCGCGGGCTCGGCGTCCAGACAACGGAGCAG TCGCCGTCTTACTTGGCTCGTTCCGCTACGCGCTTTATCCCCACCGAGAAGATTCAGGACATCTTCATCAACGAG GCCTTCCGCGGATTCGAGGTGCGCTACTACCTCGTCGTCGTTGTCGAGGGCGAGCCGGATGTCGTCGTCGTCTTT CCGGGACTCCTGCCCCCGAGGCATATCGTCGAGGCCGTCTGGAGGGGGGCTCGGGAGTGCCTCTACGAGGGCCGG GCCGAGGACAAGGGGTTGTCGCTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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