Protein ID | Ophio5|5760 |
Gene name | |
Location | scaffold_480:10045..10822 |
Strand | + |
Gene length (bp) | 777 |
Transcript length (bp) | 777 |
Coding sequence length (bp) | 774 |
Protein length (aa) | 258 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10181 | PIG-H | GPI-GlcNAc transferase complex, PIG-H component | 2.3E-27 | 161 | 226 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9Y7L7|GPI15_SCHPO | Phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi15 PE=3 SV=1 | 159 | 240 | 3.0E-16 |
sp|Q5M9N4|PIGH_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Mus musculus GN=Pigh PE=2 SV=1 | 159 | 251 | 4.0E-08 |
sp|Q14442|PIGH_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Homo sapiens GN=PIGH PE=1 SV=1 | 159 | 251 | 2.0E-07 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 92 | 114 | 22 |
2 | 134 | 153 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5760 MRLVDSGRASPLTFDLSPFTLQIVASVSPNQLLAAIAHASTTTLSIPDMLFTTPPRLHIRRPSPTAAEFIVTTRP SPPATLLSLRLLLRLPLLLLRFGLGLAALLLLYTHWAANFPDLAPPALGFLLLDRHDVLAIPLPVLLPAALATLW LVCRRLYAQESLLVLRGLGVQTTEQSPSYLARSATRFIPTEKIQDIFINEAFRGFEVRYYLVVVVEGEPDVVVVF PGLLPPRHIVEAVWRGARECLYEGRAEDKGLSL |
Coding | >Ophio5|5760 ATGCGGCTTGTCGACAGCGGACGGGCCTCACCTTTGACCTTTGACCTTTCACCTTTCACCTTGCAAATCGTTGCG TCTGTCTCTCCCAACCAACTCCTTGCTGCAATCGCCCACGCCTCAACCACCACTCTATCTATACCCGATATGCTC TTCACCACCCCTCCTCGCCTCCACATCCGCCGCCCCTCCCCCACCGCCGCCGAATTCATCGTCACCACCCGTCCT TCACCGCCCGCTACCCTCCTCTCCCTCCGGCTCCTCCTCCGGCTCCCCCTTCTCCTCCTCCGATTCGGTCTCGGT CTCGCCGCCCTACTCCTCCTCTACACCCACTGGGCCGCTAACTTTCCCGACCTCGCGCCCCCGGCCCTCGGCTTT CTCCTCCTCGACCGACACGACGTCCTCGCTATCCCCCTACCCGTCCTGCTGCCCGCCGCCCTCGCGACCCTGTGG CTCGTCTGTCGACGGCTGTACGCACAGGAATCGCTGCTTGTCCTGCGCGGGCTCGGCGTCCAGACAACGGAGCAG TCGCCGTCTTACTTGGCTCGTTCCGCTACGCGCTTTATCCCCACCGAGAAGATTCAGGACATCTTCATCAACGAG GCCTTCCGCGGATTCGAGGTGCGCTACTACCTCGTCGTCGTTGTCGAGGGCGAGCCGGATGTCGTCGTCGTCTTT CCGGGACTCCTGCCCCCGAGGCATATCGTCGAGGCCGTCTGGAGGGGGGCTCGGGAGTGCCTCTACGAGGGCCGG GCCGAGGACAAGGGGTTGTCGCTA |
Transcript | >Ophio5|5760 ATGCGGCTTGTCGACAGCGGACGGGCCTCACCTTTGACCTTTGACCTTTCACCTTTCACCTTGCAAATCGTTGCG TCTGTCTCTCCCAACCAACTCCTTGCTGCAATCGCCCACGCCTCAACCACCACTCTATCTATACCCGATATGCTC TTCACCACCCCTCCTCGCCTCCACATCCGCCGCCCCTCCCCCACCGCCGCCGAATTCATCGTCACCACCCGTCCT TCACCGCCCGCTACCCTCCTCTCCCTCCGGCTCCTCCTCCGGCTCCCCCTTCTCCTCCTCCGATTCGGTCTCGGT CTCGCCGCCCTACTCCTCCTCTACACCCACTGGGCCGCTAACTTTCCCGACCTCGCGCCCCCGGCCCTCGGCTTT CTCCTCCTCGACCGACACGACGTCCTCGCTATCCCCCTACCCGTCCTGCTGCCCGCCGCCCTCGCGACCCTGTGG CTCGTCTGTCGACGGCTGTACGCACAGGAATCGCTGCTTGTCCTGCGCGGGCTCGGCGTCCAGACAACGGAGCAG TCGCCGTCTTACTTGGCTCGTTCCGCTACGCGCTTTATCCCCACCGAGAAGATTCAGGACATCTTCATCAACGAG GCCTTCCGCGGATTCGAGGTGCGCTACTACCTCGTCGTCGTTGTCGAGGGCGAGCCGGATGTCGTCGTCGTCTTT CCGGGACTCCTGCCCCCGAGGCATATCGTCGAGGCCGTCTGGAGGGGGGCTCGGGAGTGCCTCTACGAGGGCCGG GCCGAGGACAAGGGGTTGTCGCTATAG |
Gene | >Ophio5|5760 ATGCGGCTTGTCGACAGCGGACGGGCCTCACCTTTGACCTTTGACCTTTCACCTTTCACCTTGCAAATCGTTGCG TCTGTCTCTCCCAACCAACTCCTTGCTGCAATCGCCCACGCCTCAACCACCACTCTATCTATACCCGATATGCTC TTCACCACCCCTCCTCGCCTCCACATCCGCCGCCCCTCCCCCACCGCCGCCGAATTCATCGTCACCACCCGTCCT TCACCGCCCGCTACCCTCCTCTCCCTCCGGCTCCTCCTCCGGCTCCCCCTTCTCCTCCTCCGATTCGGTCTCGGT CTCGCCGCCCTACTCCTCCTCTACACCCACTGGGCCGCTAACTTTCCCGACCTCGCGCCCCCGGCCCTCGGCTTT CTCCTCCTCGACCGACACGACGTCCTCGCTATCCCCCTACCCGTCCTGCTGCCCGCCGCCCTCGCGACCCTGTGG CTCGTCTGTCGACGGCTGTACGCACAGGAATCGCTGCTTGTCCTGCGCGGGCTCGGCGTCCAGACAACGGAGCAG TCGCCGTCTTACTTGGCTCGTTCCGCTACGCGCTTTATCCCCACCGAGAAGATTCAGGACATCTTCATCAACGAG GCCTTCCGCGGATTCGAGGTGCGCTACTACCTCGTCGTCGTTGTCGAGGGCGAGCCGGATGTCGTCGTCGTCTTT CCGGGACTCCTGCCCCCGAGGCATATCGTCGAGGCCGTCTGGAGGGGGGCTCGGGAGTGCCTCTACGAGGGCCGG GCCGAGGACAAGGGGTTGTCGCTATAG |