Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5747
Gene name
Locationscaffold_48:41105..43810
Strand-
Gene length (bp)2705
Transcript length (bp)2529
Coding sequence length (bp)2526
Protein length (aa) 842

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00620 RhoGAP RhoGAP domain 2.0E-14 516 638
PF00610 DEP Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 4.3E-11 225 290
PF00611 FCH Fes/CIP4, and EFC/F-BAR homology domain 9.6E-10 16 94

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q09697|RGA8_SCHPO Rho-GTPase-activating protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rga8 PE=1 SV=1 1 673 2.0E-163
sp|P43556|RGD2_YEAST Rho-GTPase-activating protein RGD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RGD2 PE=1 SV=1 1 675 2.0E-118
sp|Q9UUJ3|RGA9_SCHPO Probable Rho-GTPase-activating protein 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rga9 PE=1 SV=2 3 673 1.0E-42
sp|Q6PGG2|GMIP_MOUSE GEM-interacting protein OS=Mus musculus GN=Gmip PE=1 SV=1 465 666 5.0E-09
sp|Q9BE31|RHG12_MACFA Rho GTPase-activating protein 12 OS=Macaca fascicularis GN=ARHGAP12 PE=2 SV=1 460 641 4.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|Q09697|RGA8_SCHPO Rho-GTPase-activating protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rga8 PE=1 SV=1 1 673 2.0E-163
sp|P43556|RGD2_YEAST Rho-GTPase-activating protein RGD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RGD2 PE=1 SV=1 1 675 2.0E-118
sp|Q9UUJ3|RGA9_SCHPO Probable Rho-GTPase-activating protein 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rga9 PE=1 SV=2 3 673 1.0E-42
sp|Q6PGG2|GMIP_MOUSE GEM-interacting protein OS=Mus musculus GN=Gmip PE=1 SV=1 465 666 5.0E-09
sp|Q9BE31|RHG12_MACFA Rho GTPase-activating protein 12 OS=Macaca fascicularis GN=ARHGAP12 PE=2 SV=1 460 641 4.0E-08
sp|Q5RB40|HMHA1_PONAB Minor histocompatibility protein HA-1 OS=Pongo abelii GN=HMHA1 PE=2 SV=1 463 665 5.0E-08
sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 463 665 1.0E-07
sp|Q3TBD2|HMHA1_MOUSE Minor histocompatibility protein HA-1 OS=Mus musculus GN=Hmha1 PE=1 SV=2 463 667 5.0E-07
sp|Q6DE55|HMHA1_XENLA Minor histocompatibility protein HA-1 OS=Xenopus laevis GN=hmha1 PE=2 SV=1 465 667 1.0E-06
sp|Q811P8|RHG32_MOUSE Rho GTPase-activating protein 32 OS=Mus musculus GN=Arhgap32 PE=1 SV=2 539 705 8.0E-06
sp|A7KAX9|RHG32_HUMAN Rho GTPase-activating protein 32 OS=Homo sapiens GN=ARHGAP32 PE=1 SV=1 539 712 9.0E-06
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GO

GO Term Description Terminal node
GO:0007165 signal transduction Yes
GO:0035556 intracellular signal transduction Yes
GO:0009987 cellular process No
GO:0050789 regulation of biological process No
GO:0065007 biological regulation No
GO:0050794 regulation of cellular process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5747
MPGFADSFWSSDYAAGLGVLFGKLQQGVLENRQILTIARLRAEAEDTYGQRLRDIAPAADKIGGGFARDDGATVR
KAYDGMRGEMQDAARNHQRIAQNVRDLVVNPFSRWCDAHEARVHDSHEELQSLLKAHGRQVDVVQKLRSTYFNKC
RLVEDLEEENKLAFQDPETSPKPGKTIPEIKVQPHKDEESDDDEMYEIGDDIYQHEQLRKFLAPMLSTIKTGETK
VPILGTYLNTSAGSDIVEYLQRNLGVSSVSYAERIGQDLVSNGFLRLIGNVGSTFANSSRLFYQWRPKAFKMAGI
AERKQSLSRTLSLPSDGGDSPVVGTVSEYLSNWNVLNNSHPNETPAQRLLRESRESDDKYKAAVVKLDELRCELE
EAIFLHLKFLERCELDRLKAIKTVILDFSGSIGNVIPSLQSTVDKMLLFQETVQPLGDLRYLLENYRTGKFVPRV
VVYENYYNRIDEQTFGVDLEARARADKKRVPILVTTLLTYLDHHYPDLEGDEARRGVWLVDVPLVQTHKLRAIVN
NGKPISQEALSRFDIPTVANLLKLYLLELPDSLVSSHVYDIVRTIYSTPSTDTPDASRVSVLQQTLSQLRLTNIA
TLDAFMNHFTRLIDLTSADEAYVTALASSMAPYMMRPRTETSLTMEEKHAAKLIRDLFAHKDAIFNELKRMSTLN
HSSSIGAGRPRAVSTDESNRKALVEERNRALVEKVNASRSRATSPAPSPRGHRRDRSSCAETRFPVQASPPSGGE
RQRTSLGSIDGRLKRSSLEVPGAEGVGDSDGTNGSPQASRTSDGNIAAELREGSLARGGLKLVSGRGIATSMVMP
SESVPRGVTLEDKPMDD
Coding >Ophio5|5747
ATGCCGGGCTTCGCCGACTCCTTCTGGTCGAGCGACTACGCCGCAGGACTTGGCGTCCTGTTTGGCAAGCTCCAA
CAAGGCGTGCTGGAGAACCGACAGATCCTCACCATAGCTCGTCTGCGAGCCGAAGCCGAGGATACGTACGGACAG
CGACTCAGAGATATTGCCCCTGCGGCCGACAAGATTGGCGGCGGCTTCGCCCGAGACGATGGCGCCACCGTCCGC
AAGGCCTACGACGGCATGCGGGGCGAGATGCAAGACGCCGCTCGTAATCATCAGCGAATCGCGCAAAATGTACGA
GACCTCGTCGTCAACCCCTTCTCCCGTTGGTGTGATGCCCACGAGGCCCGCGTACACGACTCTCATGAAGAGCTG
CAGAGCCTCCTCAAGGCTCATGGCCGGCAAGTCGACGTCGTCCAGAAGCTCCGTTCCACATACTTCAACAAATGC
CGTCTCGTCGAGGATCTCGAGGAGGAGAACAAGCTGGCCTTTCAAGACCCAGAAACCAGTCCGAAGCCTGGCAAA
ACCATTCCTGAAATCAAAGTACAGCCTCACAAAGATGAGGAATCAGACGACGACGAAATGTACGAAATCGGTGAT
GACATCTACCAACACGAGCAGCTGAGAAAGTTCCTTGCCCCGATGTTGTCCACCATCAAAACGGGCGAGACCAAG
GTCCCCATCTTGGGCACCTATCTGAACACCTCGGCCGGCTCCGACATTGTCGAATATCTCCAGCGGAACCTGGGC
GTCAGCAGCGTGAGCTACGCCGAGCGCATCGGACAGGATCTCGTGTCCAACGGTTTCCTGCGCCTCATCGGCAAC
GTGGGAAGCACTTTTGCCAATAGCTCTAGACTCTTTTACCAATGGCGCCCCAAGGCCTTCAAAATGGCCGGCATT
GCCGAGAGGAAGCAGTCTCTGAGCCGCACCTTGTCGCTCCCATCCGACGGCGGCGACTCGCCCGTCGTCGGCACC
GTCAGCGAATACCTATCTAATTGGAATGTTCTCAACAATTCGCATCCAAACGAAACGCCCGCCCAGCGTCTGCTC
CGAGAGTCTCGCGAGTCCGACGACAAGTACAAGGCCGCAGTGGTGAAGCTCGACGAGCTTCGTTGCGAGCTTGAA
GAGGCCATCTTTTTGCACCTCAAGTTCCTGGAGCGATGTGAGCTTGACAGGCTAAAGGCCATCAAGACGGTCATC
CTCGACTTTTCCGGCTCCATCGGCAACGTCATCCCTAGCCTGCAGTCCACGGTGGACAAGATGCTGTTGTTCCAG
GAGACGGTGCAACCTCTAGGCGATCTGAGATATCTGCTCGAAAACTACCGCACAGGCAAGTTTGTGCCGAGGGTG
GTCGTGTACGAAAACTACTACAATAGGATCGACGAGCAGACCTTTGGCGTCGACTTGGAGGCCCGGGCCAGAGCT
GACAAGAAGCGGGTGCCGATCCTGGTCACGACTCTTCTGACCTACCTCGACCACCACTACCCCGATCTCGAGGGC
GATGAGGCGCGAAGGGGCGTCTGGCTAGTCGATGTGCCCCTTGTTCAGACTCACAAGCTGCGAGCTATCGTCAAC
AACGGCAAGCCCATATCCCAGGAAGCCTTGAGCCGGTTCGATATCCCCACCGTTGCGAATCTTCTCAAGCTGTAT
CTGCTTGAGCTGCCAGATTCGCTCGTCAGCTCCCACGTCTACGACATCGTTCGCACCATTTATTCTACCCCTTCA
ACAGATACCCCGGATGCCTCTCGCGTTTCTGTTCTTCAGCAGACGCTCTCCCAGCTGCGGCTCACCAACATCGCC
ACGCTGGATGCGTTCATGAATCATTTCACTCGCCTCATCGACCTGACTTCAGCTGATGAGGCGTACGTGACTGCC
CTCGCCTCGTCAATGGCGCCTTACATGATGCGGCCACGGACGGAGACGTCTCTGACGATGGAAGAGAAGCATGCG
GCGAAGCTGATTCGTGATCTCTTTGCGCACAAGGACGCCATCTTCAATGAGCTGAAGCGTATGTCGACGCTGAAT
CACAGCTCGTCGATCGGGGCCGGCCGTCCGCGAGCCGTGAGCACGGACGAGAGCAACCGGAAGGCGCTTGTCGAG
GAGCGGAACAGAGCTCTAGTGGAAAAGGTAAACGCTTCGCGGAGCCGAGCAACGAGCCCTGCACCCAGCCCGCGT
GGGCACCGTCGGGACCGAAGCAGCTGCGCCGAGACACGGTTCCCTGTGCAGGCGAGCCCGCCGTCTGGGGGCGAA
CGGCAGCGGACGAGCCTCGGAAGCATAGATGGTCGCTTGAAACGGTCTTCCCTCGAAGTTCCTGGCGCCGAAGGC
GTCGGCGATTCTGACGGCACCAACGGCTCGCCTCAGGCCTCGAGGACAAGCGATGGCAATATCGCGGCAGAGTTG
CGCGAGGGCAGTCTCGCCCGAGGGGGGCTCAAGCTCGTCAGCGGTAGAGGAATTGCGACGTCGATGGTGATGCCT
TCAGAGTCGGTTCCCCGGGGGGTGACGTTGGAAGATAAGCCCATGGACGAC
Transcript >Ophio5|5747
ATGCCGGGCTTCGCCGACTCCTTCTGGTCGAGCGACTACGCCGCAGGACTTGGCGTCCTGTTTGGCAAGCTCCAA
CAAGGCGTGCTGGAGAACCGACAGATCCTCACCATAGCTCGTCTGCGAGCCGAAGCCGAGGATACGTACGGACAG
CGACTCAGAGATATTGCCCCTGCGGCCGACAAGATTGGCGGCGGCTTCGCCCGAGACGATGGCGCCACCGTCCGC
AAGGCCTACGACGGCATGCGGGGCGAGATGCAAGACGCCGCTCGTAATCATCAGCGAATCGCGCAAAATGTACGA
GACCTCGTCGTCAACCCCTTCTCCCGTTGGTGTGATGCCCACGAGGCCCGCGTACACGACTCTCATGAAGAGCTG
CAGAGCCTCCTCAAGGCTCATGGCCGGCAAGTCGACGTCGTCCAGAAGCTCCGTTCCACATACTTCAACAAATGC
CGTCTCGTCGAGGATCTCGAGGAGGAGAACAAGCTGGCCTTTCAAGACCCAGAAACCAGTCCGAAGCCTGGCAAA
ACCATTCCTGAAATCAAAGTACAGCCTCACAAAGATGAGGAATCAGACGACGACGAAATGTACGAAATCGGTGAT
GACATCTACCAACACGAGCAGCTGAGAAAGTTCCTTGCCCCGATGTTGTCCACCATCAAAACGGGCGAGACCAAG
GTCCCCATCTTGGGCACCTATCTGAACACCTCGGCCGGCTCCGACATTGTCGAATATCTCCAGCGGAACCTGGGC
GTCAGCAGCGTGAGCTACGCCGAGCGCATCGGACAGGATCTCGTGTCCAACGGTTTCCTGCGCCTCATCGGCAAC
GTGGGAAGCACTTTTGCCAATAGCTCTAGACTCTTTTACCAATGGCGCCCCAAGGCCTTCAAAATGGCCGGCATT
GCCGAGAGGAAGCAGTCTCTGAGCCGCACCTTGTCGCTCCCATCCGACGGCGGCGACTCGCCCGTCGTCGGCACC
GTCAGCGAATACCTATCTAATTGGAATGTTCTCAACAATTCGCATCCAAACGAAACGCCCGCCCAGCGTCTGCTC
CGAGAGTCTCGCGAGTCCGACGACAAGTACAAGGCCGCAGTGGTGAAGCTCGACGAGCTTCGTTGCGAGCTTGAA
GAGGCCATCTTTTTGCACCTCAAGTTCCTGGAGCGATGTGAGCTTGACAGGCTAAAGGCCATCAAGACGGTCATC
CTCGACTTTTCCGGCTCCATCGGCAACGTCATCCCTAGCCTGCAGTCCACGGTGGACAAGATGCTGTTGTTCCAG
GAGACGGTGCAACCTCTAGGCGATCTGAGATATCTGCTCGAAAACTACCGCACAGGCAAGTTTGTGCCGAGGGTG
GTCGTGTACGAAAACTACTACAATAGGATCGACGAGCAGACCTTTGGCGTCGACTTGGAGGCCCGGGCCAGAGCT
GACAAGAAGCGGGTGCCGATCCTGGTCACGACTCTTCTGACCTACCTCGACCACCACTACCCCGATCTCGAGGGC
GATGAGGCGCGAAGGGGCGTCTGGCTAGTCGATGTGCCCCTTGTTCAGACTCACAAGCTGCGAGCTATCGTCAAC
AACGGCAAGCCCATATCCCAGGAAGCCTTGAGCCGGTTCGATATCCCCACCGTTGCGAATCTTCTCAAGCTGTAT
CTGCTTGAGCTGCCAGATTCGCTCGTCAGCTCCCACGTCTACGACATCGTTCGCACCATTTATTCTACCCCTTCA
ACAGATACCCCGGATGCCTCTCGCGTTTCTGTTCTTCAGCAGACGCTCTCCCAGCTGCGGCTCACCAACATCGCC
ACGCTGGATGCGTTCATGAATCATTTCACTCGCCTCATCGACCTGACTTCAGCTGATGAGGCGTACGTGACTGCC
CTCGCCTCGTCAATGGCGCCTTACATGATGCGGCCACGGACGGAGACGTCTCTGACGATGGAAGAGAAGCATGCG
GCGAAGCTGATTCGTGATCTCTTTGCGCACAAGGACGCCATCTTCAATGAGCTGAAGCGTATGTCGACGCTGAAT
CACAGCTCGTCGATCGGGGCCGGCCGTCCGCGAGCCGTGAGCACGGACGAGAGCAACCGGAAGGCGCTTGTCGAG
GAGCGGAACAGAGCTCTAGTGGAAAAGGTAAACGCTTCGCGGAGCCGAGCAACGAGCCCTGCACCCAGCCCGCGT
GGGCACCGTCGGGACCGAAGCAGCTGCGCCGAGACACGGTTCCCTGTGCAGGCGAGCCCGCCGTCTGGGGGCGAA
CGGCAGCGGACGAGCCTCGGAAGCATAGATGGTCGCTTGAAACGGTCTTCCCTCGAAGTTCCTGGCGCCGAAGGC
GTCGGCGATTCTGACGGCACCAACGGCTCGCCTCAGGCCTCGAGGACAAGCGATGGCAATATCGCGGCAGAGTTG
CGCGAGGGCAGTCTCGCCCGAGGGGGGCTCAAGCTCGTCAGCGGTAGAGGAATTGCGACGTCGATGGTGATGCCT
TCAGAGTCGGTTCCCCGGGGGGTGACGTTGGAAGATAAGCCCATGGACGACTAG
Gene >Ophio5|5747
ATGCCGGGCTTCGCCGACTCCTTCTGGTCGAGCGACTACGCCGCAGGTGTGTGCGCCGAACCCGGCTTCCCGTCT
CCTGCTCATCTTTTCTAGGACTTGGCGTCCTGTTTGGCAAGCTCCAACAAGGCGTGCTGGAGAACCGACAGATCC
TCACCATAGCTCGTCTGCGAGCCGAAGCCGAGGATACGTACGGACAGCGACTCAGAGATATTGCCCCTGCGGCCG
ACAAGATTGGCGGCGGCTTCGCCCGAGACGATGGCGCCACCGTCCGCAAGGTGAGCCACTTCTTTAATTGTCTCC
CGGGGCGTCAAAGGCTTCTTGTGTTCATTACCTGCTTTTCTAGGCCTACGACGGCATGCGGGGCGAGATGCAAGA
CGCCGCTCGTAATCATCAGCGAATCGCGCAAAATGTACGAGACCTCGTCGTCAACCCCTTCTCCCGTTGGTGTGA
TGCCCACGAGGCCCGCGTACACGACTCTCATGAAGAGCTGCAGAGCCTCCTCAAGGCTCATGGCCGGCAAGTCGA
CGTCGTCCAGAAGCTCCGTTCCACATACTTCAACAAATGCCGTCTCGTCGAGGATCTCGAGGAGGAGAACAAGCT
GGCCTTTCAAGACCCAGAAACCAGTCCGAAGCCTGGCAAAACCATTCCTGAAATCAAAGTACAGCCTCACAAAGA
TGAGGAATCAGACGACGACGAAATGTACGAAATCGGTGATGACATCTACCAACACGAGCAGCTGAGAAAGTTCCT
TGCCCCGATGTTGTCCACCATCAAAACGGGCGAGACCAAGGTCCCCATCTTGGGCACCTATCTGAACACCTCGGC
CGGCTCCGACATTGTCGAATATCTCCAGCGGAACCTGGGCGTCAGCAGCGTGAGCTACGCCGAGCGCATCGGACA
GGATCTCGTGTCCAACGGTTTCCTGCGCCTCATCGGCAACGTGGGAAGCACTTTTGCCAATAGCTCTAGACTCTT
TTACCAATGGCGCCCCAAGGCCTTCAAAATGGCCGGCATTGCCGAGAGGAAGCAGTCTCTGAGCCGCACCTTGTC
GCTCCCATCCGACGGCGGCGACTCGCCCGTCGTCGGCACCGTCAGCGAATACCTATCTAATTGGAATGTTCTCAA
CAATTCGCATCCAAACGAAACGCCCGCCCAGCGTCTGCTCCGAGAGTCTCGCGAGTCCGACGACAAGTACAAGGC
CGCAGTGGTGAAGCTCGACGAGCTTCGTTGCGAGCTTGAAGAGGCCATCTTTTTGCACCTCAAGTTCCTGGAGCG
ATGTGAGCTTGACAGGCTAAAGGCCATCAAGACGGTCATCCTCGACTTTTCCGGCTCCATCGGCAACGTCATCCC
TAGCCTGCAGTCCACGGTGGACAAGATGCTGTTGTTCCAGGAGACGGTGCAACCTCTAGGCGATCTGAGATATCT
GCTCGAAAACTACCGCACAGGCAAGTTTGTGCCGAGGGTGGTCGTGTACGAAAACTACTACAATAGGATCGACGA
GCAGACCTTTGGCGTCGACTTGGAGGCCCGGGCCAGAGCTGACAAGAAGCGGGTGCCGATCCTGGTCACGACTCT
TCTGACCTACCTCGACCACCACTACCCCGATCTCGAGGGCGATGAGGCGCGAAGGGGCGTCTGGCTAGTCGATGT
GCCCCTTGTTCAGACTCACAAGCTGCGAGCTATCGTCAACAACGGCAAGCCCATATCCCAGGAAGCCTTGAGCCG
GTTCGATATCCCCACCGTTGCGAATCTTCTCAAGCTGTATCTGCTTGAGCTGCCAGGTAAGCAGCGCCCGTTTGC
GAAGCCAAATGTCTTTCTAATCGTACTGATACTTTTTGGCAGATTCGCTCGTCAGCTCCCACGTCTACGACATCG
TTCGCACCATTTATTCTACCCCTTCAACAGATACCCCGGATGCCTCTCGCGTTTCTGTTCTTCAGCAGACGCTCT
CCCAGCTGCGGCTCACCAACATCGCCACGCTGGATGCGTTCATGAATCATTTCACTCGCCTCATCGACCTGACTT
CAGCTGATGAGGCGTACGTGACTGCCCTCGCCTCGTCAATGGCGCCTTACATGATGCGGCCACGGACGGAGACGT
CTCTGACGATGGAAGAGAAGCATGCGGCGAAGCTGATTCGTGATCTCTTTGCGCACAAGGACGCCATCTTCAATG
AGCTGAAGCGTATGTCGACGCTGAATCACAGCTCGTCGATCGGGGCCGGCCGTCCGCGAGCCGTGAGCACGGACG
AGAGCAACCGGAAGGCGCTTGTCGAGGAGCGGAACAGAGCTCTAGTGGAAAAGGTAAACGCTTCGCGGAGCCGAG
CAACGAGCCCTGCACCCAGCCCGCGTGGGCACCGTCGGGACCGAAGCAGCTGCGCCGAGACACGGTTCCCTGTGC
AGGCGAGCCCGCCGTCTGGGGGCGAACGGCAGCGGACGAGCCTCGGAAGCATAGATGGTCGCTTGAAACGGTCTT
CCCTCGAAGTTCCTGGCGCCGAAGGCGTCGGCGATTCTGACGGCACCAACGGCTCGCCTCAGGCCTCGAGGACAA
GCGATGGCAATATCGCGGCAGAGTTGCGCGAGGGCAGTCTCGCCCGAGGGGGGCTCAAGCTCGTCAGCGGTAGAG
GAATTGCGACGTCGATGGTGATGCCTTCAGAGTCGGTTCCCCGGGGGGTGACGTTGGAAGATAAGCCCATGGACG
ACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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