Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5724
Gene name
Locationscaffold_478:15286..16134
Strand+
Gene length (bp)848
Transcript length (bp)729
Coding sequence length (bp)726
Protein length (aa) 242

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 55 77 22
3 92 114 22
4 146 168 22
5 203 225 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5724
MDSFTVYTLPTSPPRWDRVGIFYMSFGATWTALVFSGMAFCLYHRHNPILRLRGLPLSFGAITLLHVYWILAQIV
YPVASTIPIVLAYDIQYFVMGMYFPLGIALFHASNSRFLHVAKLQMQFTQNAPRRQPTSGWFASVPYMVKLMTVI
GMGMIVQVVACVGMWLLCRKYHPTFGLLGTEIRVHTLPEQIVELGRGWEWWPSVLWQLLWAWIVAPILIWRAWGI
RDTMGWRTQTIGCCLSK
Coding >Ophio5|5724
ATGGATTCCTTCACCGTCTACACGCTTCCGACGAGCCCTCCCCGTTGGGACAGGGTCGGCATCTTCTACATGTCC
TTCGGTGCCACATGGACGGCCCTCGTCTTCTCCGGCATGGCCTTTTGCTTGTATCATCGCCACAACCCCATTCTT
CGGCTGCGTGGCTTGCCCCTGTCCTTTGGCGCCATCACGCTGCTGCACGTCTACTGGATCCTGGCGCAGATTGTC
TATCCCGTCGCCAGCACCATTCCCATCGTCTTGGCCTACGATATCCAGTACTTCGTCATGGGCATGTACTTTCCT
CTCGGAATCGCCCTGTTTCACGCCTCCAACAGCCGCTTTCTGCATGTTGCCAAGCTGCAGATGCAGTTCACACAG
AACGCCCCCCGCCGGCAGCCCACCTCGGGCTGGTTTGCCAGTGTGCCTTATATGGTGAAGCTCATGACGGTCATC
GGCATGGGAATGATTGTCCAGGTGGTCGCCTGCGTCGGAATGTGGCTCCTGTGTCGGAAATATCATCCTACCTTC
GGTCTACTCGGCACCGAGATTCGAGTACACACGCTTCCGGAGCAGATTGTCGAGCTTGGCCGCGGCTGGGAATGG
TGGCCGTCGGTGCTGTGGCAGCTCCTTTGGGCCTGGATCGTCGCTCCTATCCTCATCTGGCGTGCCTGGGGCATC
CGTGACACCATGGGCTGGCGCACTCAGACCATCGGCTGCTGTCTCTCCAAG
Transcript >Ophio5|5724
ATGGATTCCTTCACCGTCTACACGCTTCCGACGAGCCCTCCCCGTTGGGACAGGGTCGGCATCTTCTACATGTCC
TTCGGTGCCACATGGACGGCCCTCGTCTTCTCCGGCATGGCCTTTTGCTTGTATCATCGCCACAACCCCATTCTT
CGGCTGCGTGGCTTGCCCCTGTCCTTTGGCGCCATCACGCTGCTGCACGTCTACTGGATCCTGGCGCAGATTGTC
TATCCCGTCGCCAGCACCATTCCCATCGTCTTGGCCTACGATATCCAGTACTTCGTCATGGGCATGTACTTTCCT
CTCGGAATCGCCCTGTTTCACGCCTCCAACAGCCGCTTTCTGCATGTTGCCAAGCTGCAGATGCAGTTCACACAG
AACGCCCCCCGCCGGCAGCCCACCTCGGGCTGGTTTGCCAGTGTGCCTTATATGGTGAAGCTCATGACGGTCATC
GGCATGGGAATGATTGTCCAGGTGGTCGCCTGCGTCGGAATGTGGCTCCTGTGTCGGAAATATCATCCTACCTTC
GGTCTACTCGGCACCGAGATTCGAGTACACACGCTTCCGGAGCAGATTGTCGAGCTTGGCCGCGGCTGGGAATGG
TGGCCGTCGGTGCTGTGGCAGCTCCTTTGGGCCTGGATCGTCGCTCCTATCCTCATCTGGCGTGCCTGGGGCATC
CGTGACACCATGGGCTGGCGCACTCAGACCATCGGCTGCTGTCTCTCCAAGTGA
Gene >Ophio5|5724
ATGGATTCCTTCACCGTCTACACGCTTCCGACGAGCCCTCCCCGTTGGGACAGGGTCGGCATCTTCTACATGTCC
TTCGGTGCCACATGGACGGCCCTCGTCTTCTCCGGCATGGCCTTTTGCTTGTATCATCGCCACAACCCCATTCTT
CGGCTGCGTGGCTTGCCCCTGTCCTTTGGCGCCATCACGCTGCTGCACGTCTACTGGATCCTGGCGCAGATTGTC
TATCCCGTCGCCAGCACCATTCCCATCGTCTTGGCCTACGATATCCAGTACTTCGTCATGGGCATGTACTTTCCT
CTCGGAATCGCCCTGTTTCACGCCTCCAACAGCCGCTTTCTGCATGTTGCCAAGCTGCAGATGCAGTTCACACAG
AACGCCCCCCGCCGGCAGCCCACCTCGGGCTGGTTTGCCAGTGTGCCTTATATGGTGAAGCTCATGACGGTCATC
GGCATGGGAATGATTGTCCAGGTCTGTTTCTCTTCTTCTCTGCATACATGTCGGCCGCTCCCCTGCTGACCAGTC
ACCAAAAGGTGGTCGCCTGCGTCGGAATGTGGCTCCTGTGTCGGAAATATCATCCTACCTTCGGTCTACTCGGCA
CCGAGATTCGAGTACACACGCTTCCGGAGCAGATTGTCGAGCTTGGCCGCGGCTGGGAATGGTGGCCGTCGGTGC
TGTGGCAGCTCCTTTGGGCCTGGATCGTACGCTCAGCCTCGGGCTCTCCTGCTTATACGACTTCTGCTGACGATG
CTACCTAGGTCGCTCCTATCCTCATCTGGCGTGCCTGGGGCATCCGTGACACCATGGGCTGGCGCACTCAGACCA
TCGGCTGCTGTCTCTCCAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail