Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5719
Gene name
Locationscaffold_478:2888..4034
Strand-
Gene length (bp)1146
Transcript length (bp)1146
Coding sequence length (bp)1143
Protein length (aa) 381

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 4.7E-05 83 130
PF01476 LysM LysM domain 1.7E-04 214 256

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1129 0.0524 0.9297 0.0927 0.0362 0.0166 0.3099 0.1801 0.3243 0.0015

SignalP

SignalP signal predicted Location Score
Yes 1 - 24 0.999593

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup229
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4895
Ophiocordyceps camponoti-floridani Ophcf2|01392
Ophiocordyceps camponoti-floridani Ophcf2|02584
Ophiocordyceps camponoti-floridani Ophcf2|03908
Ophiocordyceps camponoti-rufipedis Ophun1|4148
Ophiocordyceps camponoti-rufipedis Ophun1|6485
Ophiocordyceps kimflemingae Ophio5|2669
Ophiocordyceps kimflemingae Ophio5|5651
Ophiocordyceps kimflemingae Ophio5|5719 (this protein)
Ophiocordyceps subramaniannii Hirsu2|3699
Ophiocordyceps subramaniannii Hirsu2|6751

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5719
MASMKHCIFLVGSAQLLLGALVNAHLVPRATRSLADANVAAPVETTNFAAGPGASQEGKSGPSLGGEGESGASRG
GNQKLCPYQVKLEEHCWGIKTDFNITLDQFYEFNPEVNGDAKNCDLAVGQTLQLPCIDASPARQPVVSQDAPCTD
TFKTEEAGTCRSIVLNKFISFRNLKDWNPQLQANEAGECDIPAGTEVCISKSEKKITCTKEYSAKSDDVCHEIAA
AQGITVNLLSGMNPNIIDNYCLIHPNQKLCVAAEGFSTEKTAATGNATQPLRAEDGQEAGQGAGDKSGQQETVSI
VKAIEQFVAPFAGNVTDPNANPDPKLLEPIKQKVEQFMKSGSTKSSPDDSGLVKSVELGLKEEGMAGAAGNTKRS
FAWTLF
Coding >Ophio5|5719
ATGGCGTCTATGAAACACTGCATCTTCCTCGTCGGCAGCGCCCAGCTACTGCTCGGAGCCTTGGTCAACGCCCAC
CTCGTCCCTCGGGCCACACGGTCACTCGCAGATGCGAATGTCGCCGCTCCTGTGGAGACGACCAACTTTGCTGCA
GGACCCGGCGCCTCGCAAGAGGGAAAGTCAGGGCCTTCGCTGGGAGGAGAAGGAGAGTCGGGAGCCTCGCGAGGA
GGAAACCAGAAACTCTGCCCTTACCAGGTCAAGTTGGAGGAGCACTGTTGGGGAATCAAGACGGATTTCAACATC
ACACTGGACCAGTTCTACGAATTCAACCCGGAAGTTAACGGGGATGCGAAAAACTGCGACCTAGCAGTTGGACAA
ACACTTCAGCTCCCCTGCATAGACGCGTCGCCGGCGAGGCAGCCTGTCGTAAGCCAAGATGCCCCTTGCACAGAC
ACGTTCAAGACCGAGGAGGCAGGGACCTGCAGGTCCATTGTCCTCAACAAGTTCATCAGTTTCAGGAACCTGAAG
GATTGGAACCCCCAACTCCAGGCCAACGAGGCTGGTGAATGCGATATTCCGGCCGGCACCGAAGTGTGCATCTCC
AAGTCCGAAAAGAAGATCACTTGCACCAAGGAATACTCGGCGAAGTCAGACGACGTATGTCACGAGATCGCCGCG
GCCCAGGGCATCACCGTGAACCTGCTCAGCGGCATGAACCCGAACATCATCGACAACTACTGCCTAATTCATCCG
AACCAGAAGCTCTGCGTCGCCGCCGAAGGCTTCTCGACGGAAAAGACGGCTGCGACCGGCAACGCCACGCAGCCG
CTGCGCGCGGAAGATGGCCAAGAAGCTGGCCAGGGCGCTGGCGACAAGTCGGGCCAGCAGGAGACCGTCAGCATT
GTCAAGGCCATCGAGCAGTTCGTCGCTCCGTTCGCCGGCAACGTGACCGATCCCAACGCAAACCCGGACCCCAAG
CTGTTGGAGCCCATCAAGCAGAAGGTCGAGCAGTTCATGAAGAGCGGCAGCACGAAGTCCAGCCCCGACGATTCG
GGACTTGTCAAGTCTGTCGAATTGGGCTTGAAGGAGGAGGGCATGGCCGGTGCGGCTGGCAACACCAAGAGGTCC
TTTGCCTGGACTCTCTTC
Transcript >Ophio5|5719
ATGGCGTCTATGAAACACTGCATCTTCCTCGTCGGCAGCGCCCAGCTACTGCTCGGAGCCTTGGTCAACGCCCAC
CTCGTCCCTCGGGCCACACGGTCACTCGCAGATGCGAATGTCGCCGCTCCTGTGGAGACGACCAACTTTGCTGCA
GGACCCGGCGCCTCGCAAGAGGGAAAGTCAGGGCCTTCGCTGGGAGGAGAAGGAGAGTCGGGAGCCTCGCGAGGA
GGAAACCAGAAACTCTGCCCTTACCAGGTCAAGTTGGAGGAGCACTGTTGGGGAATCAAGACGGATTTCAACATC
ACACTGGACCAGTTCTACGAATTCAACCCGGAAGTTAACGGGGATGCGAAAAACTGCGACCTAGCAGTTGGACAA
ACACTTCAGCTCCCCTGCATAGACGCGTCGCCGGCGAGGCAGCCTGTCGTAAGCCAAGATGCCCCTTGCACAGAC
ACGTTCAAGACCGAGGAGGCAGGGACCTGCAGGTCCATTGTCCTCAACAAGTTCATCAGTTTCAGGAACCTGAAG
GATTGGAACCCCCAACTCCAGGCCAACGAGGCTGGTGAATGCGATATTCCGGCCGGCACCGAAGTGTGCATCTCC
AAGTCCGAAAAGAAGATCACTTGCACCAAGGAATACTCGGCGAAGTCAGACGACGTATGTCACGAGATCGCCGCG
GCCCAGGGCATCACCGTGAACCTGCTCAGCGGCATGAACCCGAACATCATCGACAACTACTGCCTAATTCATCCG
AACCAGAAGCTCTGCGTCGCCGCCGAAGGCTTCTCGACGGAAAAGACGGCTGCGACCGGCAACGCCACGCAGCCG
CTGCGCGCGGAAGATGGCCAAGAAGCTGGCCAGGGCGCTGGCGACAAGTCGGGCCAGCAGGAGACCGTCAGCATT
GTCAAGGCCATCGAGCAGTTCGTCGCTCCGTTCGCCGGCAACGTGACCGATCCCAACGCAAACCCGGACCCCAAG
CTGTTGGAGCCCATCAAGCAGAAGGTCGAGCAGTTCATGAAGAGCGGCAGCACGAAGTCCAGCCCCGACGATTCG
GGACTTGTCAAGTCTGTCGAATTGGGCTTGAAGGAGGAGGGCATGGCCGGTGCGGCTGGCAACACCAAGAGGTCC
TTTGCCTGGACTCTCTTCTAA
Gene >Ophio5|5719
ATGGCGTCTATGAAACACTGCATCTTCCTCGTCGGCAGCGCCCAGCTACTGCTCGGAGCCTTGGTCAACGCCCAC
CTCGTCCCTCGGGCCACACGGTCACTCGCAGATGCGAATGTCGCCGCTCCTGTGGAGACGACCAACTTTGCTGCA
GGACCCGGCGCCTCGCAAGAGGGAAAGTCAGGGCCTTCGCTGGGAGGAGAAGGAGAGTCGGGAGCCTCGCGAGGA
GGAAACCAGAAACTCTGCCCTTACCAGGTCAAGTTGGAGGAGCACTGTTGGGGAATCAAGACGGATTTCAACATC
ACACTGGACCAGTTCTACGAATTCAACCCGGAAGTTAACGGGGATGCGAAAAACTGCGACCTAGCAGTTGGACAA
ACACTTCAGCTCCCCTGCATAGACGCGTCGCCGGCGAGGCAGCCTGTCGTAAGCCAAGATGCCCCTTGCACAGAC
ACGTTCAAGACCGAGGAGGCAGGGACCTGCAGGTCCATTGTCCTCAACAAGTTCATCAGTTTCAGGAACCTGAAG
GATTGGAACCCCCAACTCCAGGCCAACGAGGCTGGTGAATGCGATATTCCGGCCGGCACCGAAGTGTGCATCTCC
AAGTCCGAAAAGAAGATCACTTGCACCAAGGAATACTCGGCGAAGTCAGACGACGTATGTCACGAGATCGCCGCG
GCCCAGGGCATCACCGTGAACCTGCTCAGCGGCATGAACCCGAACATCATCGACAACTACTGCCTAATTCATCCG
AACCAGAAGCTCTGCGTCGCCGCCGAAGGCTTCTCGACGGAAAAGACGGCTGCGACCGGCAACGCCACGCAGCCG
CTGCGCGCGGAAGATGGCCAAGAAGCTGGCCAGGGCGCTGGCGACAAGTCGGGCCAGCAGGAGACCGTCAGCATT
GTCAAGGCCATCGAGCAGTTCGTCGCTCCGTTCGCCGGCAACGTGACCGATCCCAACGCAAACCCGGACCCCAAG
CTGTTGGAGCCCATCAAGCAGAAGGTCGAGCAGTTCATGAAGAGCGGCAGCACGAAGTCCAGCCCCGACGATTCG
GGACTTGTCAAGTCTGTCGAATTGGGCTTGAAGGAGGAGGGCATGGCCGGTGCGGCTGGCAACACCAAGAGGTCC
TTTGCCTGGACTCTCTTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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