Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5711
Gene name
Locationscaffold_476:12232..13322
Strand+
Gene length (bp)1090
Transcript length (bp)861
Coding sequence length (bp)858
Protein length (aa) 286

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.45

Transmembrane Domains

Domain # Start End Length
1 56 78 22
2 116 138 22
3 151 173 22
4 193 215 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5711
MVSTRSTSSRTASDSRLASGDSSPPMTPPIKVAKRSKRSSRRVASAAGWTHTPSRATLFWMAVSLPLVAWDTVYV
LGRPHTMEGGALHWPLWVPYKLYGEVDHIYGWKAFNARNGFTAAQGLLNLVETAMYLFYLGIFVGSPSRRLTGRP
AAVAVLVGFSAAVMTLSKTLLYWMNEYYSGFDNIGHNPLLDLVYLWIIPNGAWLVGSSYMIWNLGSDILDGLETA
AQMGKRRVGKLHAIGLTPFVRECEAKDKREIVSSSRASWSSPNGRWGYQMIRKDKNEKEKT
Coding >Ophio5|5711
ATGGTTAGCACGCGCTCCACCTCGTCGCGCACCGCCAGCGACAGTCGTCTCGCGTCCGGCGACTCCTCACCTCCT
ATGACGCCTCCCATCAAAGTGGCTAAGCGCTCCAAGCGGAGCAGCAGAAGAGTGGCGAGCGCCGCCGGCTGGACG
CACACTCCTTCGCGCGCCACGCTCTTCTGGATGGCTGTTTCGCTACCCCTCGTCGCGTGGGATACCGTCTATGTG
CTCGGTCGGCCTCATACAATGGAGGGCGGCGCGCTGCATTGGCCGTTGTGGGTGCCGTACAAGCTCTATGGCGAG
GTGGATCATATCTACGGCTGGAAGGCATTCAATGCCCGCAATGGCTTTACCGCTGCCCAGGGGTTACTCAACCTC
GTTGAGACGGCCATGTATTTGTTCTACTTGGGAATCTTCGTTGGCTCGCCGTCGCGACGATTGACGGGGAGGCCT
GCTGCTGTTGCTGTCCTCGTCGGCTTCAGCGCTGCTGTCATGACACTGAGCAAGACATTACTCTACTGGATGAAC
GAATACTACAGCGGCTTCGACAACATCGGCCACAACCCTCTACTCGACCTCGTCTACCTCTGGATCATCCCCAAC
GGTGCCTGGCTCGTCGGCTCGTCGTACATGATCTGGAATCTCGGCAGCGACATCCTCGACGGACTCGAGACTGCC
GCGCAGATGGGGAAAAGAAGGGTGGGGAAATTGCACGCCATCGGTTTGACGCCCTTTGTGAGGGAATGTGAAGCC
AAGGATAAAAGGGAAATAGTCTCGTCATCTCGAGCTAGTTGGTCCAGTCCCAACGGACGATGGGGGTATCAGATG
ATCAGGAAAGACAAGAATGAAAAAGAAAAGACG
Transcript >Ophio5|5711
ATGGTTAGCACGCGCTCCACCTCGTCGCGCACCGCCAGCGACAGTCGTCTCGCGTCCGGCGACTCCTCACCTCCT
ATGACGCCTCCCATCAAAGTGGCTAAGCGCTCCAAGCGGAGCAGCAGAAGAGTGGCGAGCGCCGCCGGCTGGACG
CACACTCCTTCGCGCGCCACGCTCTTCTGGATGGCTGTTTCGCTACCCCTCGTCGCGTGGGATACCGTCTATGTG
CTCGGTCGGCCTCATACAATGGAGGGCGGCGCGCTGCATTGGCCGTTGTGGGTGCCGTACAAGCTCTATGGCGAG
GTGGATCATATCTACGGCTGGAAGGCATTCAATGCCCGCAATGGCTTTACCGCTGCCCAGGGGTTACTCAACCTC
GTTGAGACGGCCATGTATTTGTTCTACTTGGGAATCTTCGTTGGCTCGCCGTCGCGACGATTGACGGGGAGGCCT
GCTGCTGTTGCTGTCCTCGTCGGCTTCAGCGCTGCTGTCATGACACTGAGCAAGACATTACTCTACTGGATGAAC
GAATACTACAGCGGCTTCGACAACATCGGCCACAACCCTCTACTCGACCTCGTCTACCTCTGGATCATCCCCAAC
GGTGCCTGGCTCGTCGGCTCGTCGTACATGATCTGGAATCTCGGCAGCGACATCCTCGACGGACTCGAGACTGCC
GCGCAGATGGGGAAAAGAAGGGTGGGGAAATTGCACGCCATCGGTTTGACGCCCTTTGTGAGGGAATGTGAAGCC
AAGGATAAAAGGGAAATAGTCTCGTCATCTCGAGCTAGTTGGTCCAGTCCCAACGGACGATGGGGGTATCAGATG
ATCAGGAAAGACAAGAATGAAAAAGAAAAGACGTGA
Gene >Ophio5|5711
ATGGTTAGCACGCGCTCCACCTCGTCGCGCACCGCCAGCGACAGTCGTCTCGCGTCCGGCGACTCCTCACCTCCT
ATGACGCCTCCCATCAAAGTGGCTAAGCGCTCCAAGCGGAGCAGCAGAAGAGTGGCGAGCGCCGCCGGCTGGACG
CACACTCCTTCGCGCGCCACGCTCTTCTGGATGGCTGTTTCGCTACCCCTCGTCGCGTGGGATACCGTCTATGTG
CTCGGTCGGCCTCATACAATGGAGGGCGGCGCGCTGCATTGGCCGTTGTGGGTGCCGTACAAGCTCTATGGCGAG
GTGGATCATATCTACGGCTGGAAGGCATTCAATGCCCGCAATGGCTTTACCGCTGCCCAGGGGTTACTCAACCTC
GTTGAGACGGCCATGTATTTGTTCTACTTGGGAATCTTCGTTGGCTCGCCGTCGCGACGATTGACGGGGAGGCCT
GCTGCTGTTGCTGTCCTCGTCGGCTTCAGCGCTGCTGTCATGACACTGAGCAAGACATTACTCTACTGTAAGTGA
GCCCTACCCTTTGCTCTCCCTGTCTTGCGCTGACGCCCCACATCCAGGGATGAACGAATACTACAGCGGCTTCGA
CAACATCGGCCACAACCCTCTACTCGACCTCGTCTACCTCTGGATCATCCCCAAGTCCGTTGTCCATCCCCTCCA
CTCCTCCCCCATACAGCGCTGACCTCGGCCTACAGCGGTGCCTGGCTCGTCGGCTCGTCGTACATGATCTGGAAT
CTCGGCAGCGACATCCTCGACGGACTCGAGACTGCCGCGTCCCACGCCAAACAAGAATAGGATATCATTCACGGC
AAGCATTCATGTCGAGCCGGCCTAGTAGGCAGATGGGGAAAAGAAGGGTGGGGAAATTGCACGCCATCGGTTTGA
CGCCCTTTGTGAGGGAATGTGAAGCCAAGGCAAGCCACGCCTCCCAAACGAGACGCCGATCCAGAAGATTGAGAT
GAAGTAGGATAAAAGGGAAATAGTCTCGTCATCTCGAGCTAGTTGGTCCAGTCCCAACGGACGATGGGGGTATCA
GATGATCAGGAAAGACAAGAATGAAAAAGAAAAGACGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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