Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5710
Gene name
Locationscaffold_476:9532..10156
Strand-
Gene length (bp)624
Transcript length (bp)567
Coding sequence length (bp)564
Protein length (aa) 188

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 49 71 22
3 86 108 22
4 137 159 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5710
MGVFTPPPILALAYLGVRLFQIFLLLTPIVGLLGWFTDVTLSRFGFVDIRLLPEGVAIIFIVSIVALGWSLLTVL
SMFAVEIDGKLVAVIDFGIMGALIGGVVRLRFIQFSCLVRRFFRTALTDEAFRLCASVKASWILAIIALIMFFVT
GVLALLASFLRQPFRFGGKRRRRAVHAEHAGVHVHVDS
Coding >Ophio5|5710
ATGGGCGTCTTTACTCCTCCGCCTATTCTCGCGCTGGCGTACTTAGGAGTACGCTTGTTCCAAATATTCTTGCTC
TTGACGCCCATCGTCGGTCTCCTTGGCTGGTTCACCGACGTCACCTTGTCTCGATTTGGCTTCGTCGACATTAGG
CTATTGCCAGAGGGAGTGGCCATCATCTTCATCGTCTCCATCGTGGCCCTCGGCTGGTCACTCCTCACAGTCCTC
AGCATGTTTGCCGTCGAGATTGACGGCAAACTGGTGGCCGTCATCGACTTCGGCATCATGGGAGCCCTGATCGGC
GGCGTCGTCAGACTGCGCTTCATCCAATTTTCCTGTCTCGTCCGTCGCTTCTTTCGCACAGCCCTGACTGACGAA
GCATTCCGATTATGTGCCTCGGTTAAGGCTAGCTGGATTCTAGCCATCATTGCCCTCATCATGTTCTTCGTCACG
GGTGTGCTGGCCCTCTTGGCCTCATTTCTCAGACAACCCTTCCGCTTTGGTGGCAAGAGACGGAGAAGAGCGGTG
CATGCGGAACATGCCGGAGTGCACGTCCACGTCGATTCG
Transcript >Ophio5|5710
ATGGGCGTCTTTACTCCTCCGCCTATTCTCGCGCTGGCGTACTTAGGAGTACGCTTGTTCCAAATATTCTTGCTC
TTGACGCCCATCGTCGGTCTCCTTGGCTGGTTCACCGACGTCACCTTGTCTCGATTTGGCTTCGTCGACATTAGG
CTATTGCCAGAGGGAGTGGCCATCATCTTCATCGTCTCCATCGTGGCCCTCGGCTGGTCACTCCTCACAGTCCTC
AGCATGTTTGCCGTCGAGATTGACGGCAAACTGGTGGCCGTCATCGACTTCGGCATCATGGGAGCCCTGATCGGC
GGCGTCGTCAGACTGCGCTTCATCCAATTTTCCTGTCTCGTCCGTCGCTTCTTTCGCACAGCCCTGACTGACGAA
GCATTCCGATTATGTGCCTCGGTTAAGGCTAGCTGGATTCTAGCCATCATTGCCCTCATCATGTTCTTCGTCACG
GGTGTGCTGGCCCTCTTGGCCTCATTTCTCAGACAACCCTTCCGCTTTGGTGGCAAGAGACGGAGAAGAGCGGTG
CATGCGGAACATGCCGGAGTGCACGTCCACGTCGATTCGTGA
Gene >Ophio5|5710
ATGGGCGTCTTTACTCCTCCGCCTATTCTCGCGCTGGCGTACTTAGGAGTACGCTTGTTCCAAATATTCTTGCTC
TTGGTGAGTCGTTCGCCTCACCCTCTACAGCTGTCACGATGCTGATGCCTGCATTTCTAGACGCCCATCGTCGGT
CTCCTTGGCTGGTTCACCGACGTCACCTTGTCTCGATTTGGCTTCGTCGACATTAGGCTATTGCCAGAGGGAGTG
GCCATCATCTTCATCGTCTCCATCGTGGCCCTCGGCTGGTCACTCCTCACAGTCCTCAGCATGTTTGCCGTCGAG
ATTGACGGCAAACTGGTGGCCGTCATCGACTTCGGCATCATGGGAGCCCTGATCGGCGGCGTCGTCAGACTGCGC
TTCATCCAATTTTCCTGTCTCGTCCGTCGCTTCTTTCGCACAGCCCTGACTGACGAAGCATTCCGATTATGTGCC
TCGGTTAAGGCTAGCTGGATTCTAGCCATCATTGCCCTCATCATGTTCTTCGTCACGGGTGTGCTGGCCCTCTTG
GCCTCATTTCTCAGACAACCCTTCCGCTTTGGTGGCAAGAGACGGAGAAGAGCGGTGCATGCGGAACATGCCGGA
GTGCACGTCCACGTCGATTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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