Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|5708
Gene name
Location	scaffold_475:14793..15882
Strand	+
Gene length (bp)	1089
Transcript length (bp)	975
Coding sequence length (bp)	972
Protein length (aa)	324

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 51	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	201	223	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|5708 MERVKADDARGRFPRKSRGLRARNVPAHNVPKTLARIIVGLPGGNGPGSAAPARGPQQRAAAPPSEIDSDSDSDN ETPPARVKPNPAVRAGTSTSLSTLTLVVSSAPKLTTAPNLVAPQRPVATSSRVPALNAISRTSQSVRQQQTTLSS SAERSSSFSTSSTQATETKSSATSVDAGIKAASPTPEEPDPKREGRLDGGAEAGIVVGVLAFIILLSFTIFLFRR YRRRRSGNQPPMATMLSDRMISAPMPARRQSDAMTVNVGYYDAANRRPSEPQGMVQEPQPASMARSGENEYFQRR VLAEPSPEMAEGAAERSHEPTHFI
Coding	>Ophio5\|5708 ATGGAACGTGTGAAAGCTGACGACGCTCGCGGCCGGTTTCCGCGGAAATCCAGAGGGCTCCGAGCACGCAACGTG CCAGCCCACAACGTGCCCAAAACACTGGCACGCATCATCGTCGGGTTGCCTGGCGGTAATGGGCCTGGCTCGGCT GCCCCAGCCCGTGGGCCTCAGCAGCGAGCGGCGGCGCCGCCCAGCGAGATTGACTCGGACTCGGACTCGGACAAC GAAACGCCGCCTGCGAGGGTAAAGCCGAACCCGGCCGTTCGTGCCGGGACGTCGACCTCTCTGTCTACGCTGACG CTGGTGGTCTCATCTGCACCAAAGCTGACGACTGCTCCGAACTTGGTGGCACCTCAAAGACCGGTGGCGACATCG AGTCGAGTGCCTGCTTTGAACGCCATCAGCCGAACTTCGCAGAGCGTCCGCCAGCAGCAGACGACATTGTCGTCG TCGGCCGAGCGATCCTCTTCTTTCAGCACCTCGAGCACGCAGGCGACAGAGACAAAGTCATCTGCAACATCGGTC GATGCGGGCATCAAGGCGGCCAGCCCCACCCCGGAAGAGCCCGACCCCAAGCGAGAGGGGCGTTTAGATGGCGGG GCCGAGGCTGGCATCGTCGTGGGTGTCTTGGCCTTTATCATTCTCCTGTCCTTCACCATCTTTTTATTCCGCCGC TACCGCCGTAGACGATCCGGGAACCAGCCTCCCATGGCAACGATGCTATCGGACAGGATGATATCGGCACCGATG CCGGCACGGAGGCAGTCGGACGCCATGACGGTCAACGTCGGCTACTATGACGCAGCGAATCGACGGCCATCGGAG CCGCAAGGCATGGTCCAGGAGCCGCAGCCGGCGTCTATGGCACGGTCCGGCGAGAACGAGTATTTCCAGCGCCGG GTGCTTGCCGAGCCGTCACCGGAGATGGCCGAGGGAGCGGCGGAGCGGTCACATGAGCCGACGCATTTCATT
Transcript	>Ophio5\|5708 ATGGAACGTGTGAAAGCTGACGACGCTCGCGGCCGGTTTCCGCGGAAATCCAGAGGGCTCCGAGCACGCAACGTG CCAGCCCACAACGTGCCCAAAACACTGGCACGCATCATCGTCGGGTTGCCTGGCGGTAATGGGCCTGGCTCGGCT GCCCCAGCCCGTGGGCCTCAGCAGCGAGCGGCGGCGCCGCCCAGCGAGATTGACTCGGACTCGGACTCGGACAAC GAAACGCCGCCTGCGAGGGTAAAGCCGAACCCGGCCGTTCGTGCCGGGACGTCGACCTCTCTGTCTACGCTGACG CTGGTGGTCTCATCTGCACCAAAGCTGACGACTGCTCCGAACTTGGTGGCACCTCAAAGACCGGTGGCGACATCG AGTCGAGTGCCTGCTTTGAACGCCATCAGCCGAACTTCGCAGAGCGTCCGCCAGCAGCAGACGACATTGTCGTCG TCGGCCGAGCGATCCTCTTCTTTCAGCACCTCGAGCACGCAGGCGACAGAGACAAAGTCATCTGCAACATCGGTC GATGCGGGCATCAAGGCGGCCAGCCCCACCCCGGAAGAGCCCGACCCCAAGCGAGAGGGGCGTTTAGATGGCGGG GCCGAGGCTGGCATCGTCGTGGGTGTCTTGGCCTTTATCATTCTCCTGTCCTTCACCATCTTTTTATTCCGCCGC TACCGCCGTAGACGATCCGGGAACCAGCCTCCCATGGCAACGATGCTATCGGACAGGATGATATCGGCACCGATG CCGGCACGGAGGCAGTCGGACGCCATGACGGTCAACGTCGGCTACTATGACGCAGCGAATCGACGGCCATCGGAG CCGCAAGGCATGGTCCAGGAGCCGCAGCCGGCGTCTATGGCACGGTCCGGCGAGAACGAGTATTTCCAGCGCCGG GTGCTTGCCGAGCCGTCACCGGAGATGGCCGAGGGAGCGGCGGAGCGGTCACATGAGCCGACGCATTTCATTTAA
Gene	>Ophio5\|5708 ATGGAACGTGTGAAAGCTGACGACGCTCGGTAAGGCTGAGAGAAACATCTTCCTTGTTCAACATATTTATTGACT GACTTTTTCACAGCGGCCGGTTTCCGCGGAAATCCAGAGGGCTCCGAGCACGCAACGTGCCAGCCCACAACGTGC CCAAAACACTGGCACGCATCATCGTCGGGTTGCCTGGCGGTAATGGGCCTGGCTCGGCTGCCCCAGCCCGTGGGC CTCAGCAGCGAGCGGCGGCGCCGCCCAGCGAGATTGACTCGGACTCGGACTCGGACAACGAAACGCCGCCTGCGA GGGTAAAGCCGAACCCGGCCGTTCGTGCCGGGACGTCGACCTCTCTGTCTACGCTGACGCTGGTGGTCTCATCTG CACCAAAGCTGACGACTGCTCCGAACTTGGTGGCACCTCAAAGACCGGTGGCGACATCGAGTCGAGTGCCTGCTT TGAACGCCATCAGCCGAACTTCGCAGAGCGTCCGCCAGCAGCAGACGACATTGTCGTCGTCGGCCGAGCGATCCT CTTCTTTCAGCACCTCGAGCACGCAGGCGACAGAGACAAAGTCATCTGCAACATCGGTCGATGCGGGCATCAAGG CGGCCAGCCCCACCCCGGAAGAGCCCGACCCCAAGCGAGAGGGGCGTTTAGATGGCGGGGCCGAGGCTGGCATCG TCGTGGGTGTCTTGGGTAAGTTTTTGATTGGTTGGCATTGCATGTTACATGAAGCTCATGCGTGCGGCAGCCTTT ATCATTCTCCTGTCCTTCACCATCTTTTTATTCCGCCGCTACCGCCGTAGACGATCCGGGAACCAGCCTCCCATG GCAACGATGCTATCGGACAGGATGATATCGGCACCGATGCCGGCACGGAGGCAGTCGGACGCCATGACGGTCAAC GTCGGCTACTATGACGCAGCGAATCGACGGCCATCGGAGCCGCAAGGCATGGTCCAGGAGCCGCAGCCGGCGTCT ATGGCACGGTCCGGCGAGAACGAGTATTTCCAGCGCCGGGTGCTTGCCGAGCCGTCACCGGAGATGGCCGAGGGA GCGGCGGAGCGGTCACATGAGCCGACGCATTTCATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail