Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5702
Gene name
Locationscaffold_474:13357..14416
Strand+
Gene length (bp)1059
Transcript length (bp)1059
Coding sequence length (bp)1056
Protein length (aa) 352

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 64 86 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5702
MAPARRPAKKTKPGGVTAALSTDELPSPFKRPPEVLQSFVAGLVERHIYVTHIDSQPAVFKRNIFLVPVAMNLCI
SLLFVWRMYAVLPWYWQLVLSALGYVSEATFAASQSSWPELAREIGRRGLTMFIDFVLFVCVWHWPVDFAAGRRH
GNPMLWRRRVGFRDKEIYVRRSRKWDEAVGDVLADSDSRNIITAYIRQATSPMLQDQKTGYLLMDAAWDLDWEAM
VYAHDLVDKKHIALEAFRNVVLLHHRDYGWLCYDLKAGAEIDSEDKRRQVFAFRDALTSMGKEDLFYRWVETVQF
ETTQPGGFGTAQQEATAKKIREMFETEHVNFDELWKEATGGKQAFSSTESTE
Coding >Ophio5|5702
ATGGCTCCCGCCCGCCGACCAGCTAAAAAGACCAAGCCCGGAGGCGTCACGGCGGCCTTATCCACAGACGAGCTT
CCATCACCGTTCAAGCGGCCGCCCGAAGTGCTGCAGTCCTTCGTCGCCGGACTCGTAGAGCGACACATTTACGTG
ACGCACATCGACTCTCAGCCGGCCGTCTTCAAGCGCAACATTTTTCTCGTGCCCGTGGCGATGAATTTATGCATT
TCGCTGCTGTTCGTCTGGCGCATGTACGCTGTGCTTCCTTGGTACTGGCAGCTCGTGCTCTCGGCGCTGGGGTAT
GTTAGTGAAGCTACCTTTGCTGCTTCGCAATCCAGCTGGCCCGAACTGGCTCGCGAGATTGGTCGCCGTGGCCTG
ACCATGTTCATCGACTTCGTCCTCTTCGTTTGCGTCTGGCACTGGCCCGTCGACTTTGCTGCTGGTCGACGTCAT
GGGAACCCGATGCTCTGGCGCCGCCGCGTCGGCTTCCGCGACAAGGAGATATACGTGCGCCGTAGCCGCAAATGG
GACGAGGCCGTTGGTGATGTCTTGGCCGACTCCGACTCGCGCAACATCATCACCGCCTACATCCGCCAGGCTACC
TCGCCCATGCTGCAGGACCAGAAGACGGGCTACCTGCTCATGGATGCCGCCTGGGATCTCGACTGGGAGGCCATG
GTTTATGCCCACGATCTGGTCGACAAGAAGCATATCGCCCTCGAGGCCTTTCGAAACGTGGTGCTGCTGCATCAC
CGAGACTACGGGTGGTTGTGCTACGACCTCAAGGCCGGCGCCGAGATCGACTCAGAGGACAAGAGGAGACAGGTG
TTTGCCTTTCGCGACGCCCTCACCTCCATGGGGAAGGAGGATCTGTTCTACCGTTGGGTCGAGACGGTGCAGTTC
GAGACGACGCAGCCGGGTGGCTTTGGCACGGCGCAGCAGGAGGCGACTGCGAAAAAGATTCGAGAAATGTTTGAA
ACCGAGCATGTCAACTTTGACGAGTTGTGGAAAGAGGCAACTGGCGGCAAGCAGGCGTTTAGTAGCACAGAAAGT
ACAGAA
Transcript >Ophio5|5702
ATGGCTCCCGCCCGCCGACCAGCTAAAAAGACCAAGCCCGGAGGCGTCACGGCGGCCTTATCCACAGACGAGCTT
CCATCACCGTTCAAGCGGCCGCCCGAAGTGCTGCAGTCCTTCGTCGCCGGACTCGTAGAGCGACACATTTACGTG
ACGCACATCGACTCTCAGCCGGCCGTCTTCAAGCGCAACATTTTTCTCGTGCCCGTGGCGATGAATTTATGCATT
TCGCTGCTGTTCGTCTGGCGCATGTACGCTGTGCTTCCTTGGTACTGGCAGCTCGTGCTCTCGGCGCTGGGGTAT
GTTAGTGAAGCTACCTTTGCTGCTTCGCAATCCAGCTGGCCCGAACTGGCTCGCGAGATTGGTCGCCGTGGCCTG
ACCATGTTCATCGACTTCGTCCTCTTCGTTTGCGTCTGGCACTGGCCCGTCGACTTTGCTGCTGGTCGACGTCAT
GGGAACCCGATGCTCTGGCGCCGCCGCGTCGGCTTCCGCGACAAGGAGATATACGTGCGCCGTAGCCGCAAATGG
GACGAGGCCGTTGGTGATGTCTTGGCCGACTCCGACTCGCGCAACATCATCACCGCCTACATCCGCCAGGCTACC
TCGCCCATGCTGCAGGACCAGAAGACGGGCTACCTGCTCATGGATGCCGCCTGGGATCTCGACTGGGAGGCCATG
GTTTATGCCCACGATCTGGTCGACAAGAAGCATATCGCCCTCGAGGCCTTTCGAAACGTGGTGCTGCTGCATCAC
CGAGACTACGGGTGGTTGTGCTACGACCTCAAGGCCGGCGCCGAGATCGACTCAGAGGACAAGAGGAGACAGGTG
TTTGCCTTTCGCGACGCCCTCACCTCCATGGGGAAGGAGGATCTGTTCTACCGTTGGGTCGAGACGGTGCAGTTC
GAGACGACGCAGCCGGGTGGCTTTGGCACGGCGCAGCAGGAGGCGACTGCGAAAAAGATTCGAGAAATGTTTGAA
ACCGAGCATGTCAACTTTGACGAGTTGTGGAAAGAGGCAACTGGCGGCAAGCAGGCGTTTAGTAGCACAGAAAGT
ACAGAATAG
Gene >Ophio5|5702
ATGGCTCCCGCCCGCCGACCAGCTAAAAAGACCAAGCCCGGAGGCGTCACGGCGGCCTTATCCACAGACGAGCTT
CCATCACCGTTCAAGCGGCCGCCCGAAGTGCTGCAGTCCTTCGTCGCCGGACTCGTAGAGCGACACATTTACGTG
ACGCACATCGACTCTCAGCCGGCCGTCTTCAAGCGCAACATTTTTCTCGTGCCCGTGGCGATGAATTTATGCATT
TCGCTGCTGTTCGTCTGGCGCATGTACGCTGTGCTTCCTTGGTACTGGCAGCTCGTGCTCTCGGCGCTGGGGTAT
GTTAGTGAAGCTACCTTTGCTGCTTCGCAATCCAGCTGGCCCGAACTGGCTCGCGAGATTGGTCGCCGTGGCCTG
ACCATGTTCATCGACTTCGTCCTCTTCGTTTGCGTCTGGCACTGGCCCGTCGACTTTGCTGCTGGTCGACGTCAT
GGGAACCCGATGCTCTGGCGCCGCCGCGTCGGCTTCCGCGACAAGGAGATATACGTGCGCCGTAGCCGCAAATGG
GACGAGGCCGTTGGTGATGTCTTGGCCGACTCCGACTCGCGCAACATCATCACCGCCTACATCCGCCAGGCTACC
TCGCCCATGCTGCAGGACCAGAAGACGGGCTACCTGCTCATGGATGCCGCCTGGGATCTCGACTGGGAGGCCATG
GTTTATGCCCACGATCTGGTCGACAAGAAGCATATCGCCCTCGAGGCCTTTCGAAACGTGGTGCTGCTGCATCAC
CGAGACTACGGGTGGTTGTGCTACGACCTCAAGGCCGGCGCCGAGATCGACTCAGAGGACAAGAGGAGACAGGTG
TTTGCCTTTCGCGACGCCCTCACCTCCATGGGGAAGGAGGATCTGTTCTACCGTTGGGTCGAGACGGTGCAGTTC
GAGACGACGCAGCCGGGTGGCTTTGGCACGGCGCAGCAGGAGGCGACTGCGAAAAAGATTCGAGAAATGTTTGAA
ACCGAGCATGTCAACTTTGACGAGTTGTGGAAAGAGGCAACTGGCGGCAAGCAGGCGTTTAGTAGCACAGAAAGT
ACAGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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