Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5678
Gene name
Locationscaffold_47:57218..58652
Strand-
Gene length (bp)1434
Transcript length (bp)1335
Coding sequence length (bp)1332
Protein length (aa) 444

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 70 92 22
3 105 127 22
4 155 177 22
5 189 207 18
6 222 244 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5678
MIVLRVAGRFIRTERLFREDKIAALALVPLVLRLVCVHFVLVFGTNNADFGSLVLSDQQLRQKSIASGLVLASRF
FYAATLWILKYAILEFLKRLTDLTWRRSHLAALGIIRWTLVVTFVVVVISILAECRPFSHYWQVVPDPGGQCRQG
LVQLITMATCNIATDALLVIFPVPIILSSQMRLRRKLQLIMLFSLSLSVVAVTIYRLPHILRQHGRQQYRSLLAS
VELIFATASANALVLGSFVRDRGIKKPKFRRPSNADSFDRASYPRRPTLQQQWGSDEDLVRDVGLSLDPQLRRPS
ATPSRPVASPRPANDHDHDYKSALRSELRRPPQPPHETLSFLDVGGLLNHDDDDDDDNVTTRRAVSSALPPAASV
PASASGFRRGSTALLQDLGGLLGPPSSGTTWSSPGRGPQAESPSPRAHRSYDSQRDAGPPLMDPGGLLK
Coding >Ophio5|5678
ATGATTGTGTTGCGGGTGGCGGGACGATTCATTCGCACCGAGAGGTTGTTTCGTGAGGATAAGATTGCCGCCTTG
GCCTTGGTGCCGCTTGTTTTGCGCTTGGTTTGTGTTCATTTTGTTTTGGTTTTCGGAACGAATAATGCGGATTTC
GGCTCGCTTGTGCTTTCCGATCAGCAGCTGCGTCAAAAGTCCATCGCCAGCGGACTTGTTCTCGCCAGTCGCTTC
TTCTATGCTGCTACACTCTGGATTCTCAAGTATGCTATTCTCGAGTTCCTCAAGCGCCTCACCGATCTCACCTGG
CGCCGCTCCCATCTGGCTGCGCTGGGAATCATCCGCTGGACTCTGGTCGTCACCTTCGTCGTCGTCGTCATCAGC
ATCCTGGCCGAATGTCGCCCCTTTTCTCATTACTGGCAGGTCGTTCCTGATCCCGGCGGCCAGTGCCGACAGGGT
CTGGTGCAGCTCATCACCATGGCGACGTGCAATATCGCTACCGATGCCCTGCTCGTCATCTTCCCCGTGCCCATC
ATCCTTAGCAGCCAGATGAGGCTACGACGCAAGCTACAGCTCATCATGCTCTTCTCTCTCAGTCTATCCGTCGTC
GCAGTCACCATCTATCGTCTACCGCATATCCTGCGCCAACACGGCCGCCAGCAATATCGCTCCTTGTTGGCTTCC
GTCGAGCTCATCTTCGCCACTGCTTCTGCCAATGCCCTCGTCCTGGGCTCCTTTGTTCGCGATCGCGGCATCAAG
AAGCCCAAGTTTAGGAGGCCCTCTAACGCTGATTCCTTCGACCGCGCCAGCTATCCGAGGAGACCTACCCTTCAG
CAGCAATGGGGAAGCGATGAGGACCTCGTTCGAGATGTCGGTTTGAGCCTGGACCCGCAACTGCGAAGACCTTCG
GCTACACCATCCCGACCTGTCGCCTCTCCCCGTCCGGCCAATGACCATGACCATGACTACAAGTCGGCGCTCCGG
TCCGAGCTTCGTCGTCCGCCTCAGCCTCCGCACGAGACGCTCTCCTTTCTCGACGTCGGAGGCTTACTGAATCAT
GATGATGATGATGATGATGATAATGTCACCACCCGACGCGCCGTGTCTTCCGCCCTGCCGCCTGCTGCCTCGGTG
CCGGCTTCTGCCTCGGGTTTCCGTCGAGGCTCCACGGCCTTGCTGCAGGATCTCGGCGGTCTCTTGGGGCCGCCC
AGCTCTGGTACGACTTGGTCGTCTCCGGGAAGAGGACCACAGGCCGAATCGCCGTCGCCGCGTGCCCACCGGTCC
TATGACAGCCAGAGGGACGCGGGGCCGCCACTGATGGATCCGGGCGGCCTGTTGAAG
Transcript >Ophio5|5678
ATGATTGTGTTGCGGGTGGCGGGACGATTCATTCGCACCGAGAGGTTGTTTCGTGAGGATAAGATTGCCGCCTTG
GCCTTGGTGCCGCTTGTTTTGCGCTTGGTTTGTGTTCATTTTGTTTTGGTTTTCGGAACGAATAATGCGGATTTC
GGCTCGCTTGTGCTTTCCGATCAGCAGCTGCGTCAAAAGTCCATCGCCAGCGGACTTGTTCTCGCCAGTCGCTTC
TTCTATGCTGCTACACTCTGGATTCTCAAGTATGCTATTCTCGAGTTCCTCAAGCGCCTCACCGATCTCACCTGG
CGCCGCTCCCATCTGGCTGCGCTGGGAATCATCCGCTGGACTCTGGTCGTCACCTTCGTCGTCGTCGTCATCAGC
ATCCTGGCCGAATGTCGCCCCTTTTCTCATTACTGGCAGGTCGTTCCTGATCCCGGCGGCCAGTGCCGACAGGGT
CTGGTGCAGCTCATCACCATGGCGACGTGCAATATCGCTACCGATGCCCTGCTCGTCATCTTCCCCGTGCCCATC
ATCCTTAGCAGCCAGATGAGGCTACGACGCAAGCTACAGCTCATCATGCTCTTCTCTCTCAGTCTATCCGTCGTC
GCAGTCACCATCTATCGTCTACCGCATATCCTGCGCCAACACGGCCGCCAGCAATATCGCTCCTTGTTGGCTTCC
GTCGAGCTCATCTTCGCCACTGCTTCTGCCAATGCCCTCGTCCTGGGCTCCTTTGTTCGCGATCGCGGCATCAAG
AAGCCCAAGTTTAGGAGGCCCTCTAACGCTGATTCCTTCGACCGCGCCAGCTATCCGAGGAGACCTACCCTTCAG
CAGCAATGGGGAAGCGATGAGGACCTCGTTCGAGATGTCGGTTTGAGCCTGGACCCGCAACTGCGAAGACCTTCG
GCTACACCATCCCGACCTGTCGCCTCTCCCCGTCCGGCCAATGACCATGACCATGACTACAAGTCGGCGCTCCGG
TCCGAGCTTCGTCGTCCGCCTCAGCCTCCGCACGAGACGCTCTCCTTTCTCGACGTCGGAGGCTTACTGAATCAT
GATGATGATGATGATGATGATAATGTCACCACCCGACGCGCCGTGTCTTCCGCCCTGCCGCCTGCTGCCTCGGTG
CCGGCTTCTGCCTCGGGTTTCCGTCGAGGCTCCACGGCCTTGCTGCAGGATCTCGGCGGTCTCTTGGGGCCGCCC
AGCTCTGGTACGACTTGGTCGTCTCCGGGAAGAGGACCACAGGCCGAATCGCCGTCGCCGCGTGCCCACCGGTCC
TATGACAGCCAGAGGGACGCGGGGCCGCCACTGATGGATCCGGGCGGCCTGTTGAAGTGA
Gene >Ophio5|5678
ATGATTGTGTTGCGGGTGGCGGGACGATTCATTCGCACCGAGAGGTTGTTTCGTGAGGATAAGATTGCCGCCTTG
GCCTTGGTGCCGCTTGTTTTGCGCTTGGTTTGTGTTCATTTTGTTTTGGTTTTCGGAACGAATAATGCGGATTTC
GGCTCGCTTGTGCTTTCCGATCAGCAGCTGCGTCAAAAGTCCATCGCCAGCGGACTTGTTCTCGCCAGTCGCTTC
TTCTATGCTGCTACGTATGCCTTTTTTTTATATACCCTCTTCTGTTTTTTTTTCTTTTTCTTTGCTACTCCTCGC
TGAGCTGACGCCAAAAAAAAATAATAATAATCTTCCAGACTCTGGATTCTCAAGTATGCTATTCTCGAGTTCCTC
AAGCGCCTCACCGATCTCACCTGGCGCCGCTCCCATCTGGCTGCGCTGGGAATCATCCGCTGGACTCTGGTCGTC
ACCTTCGTCGTCGTCGTCATCAGCATCCTGGCCGAATGTCGCCCCTTTTCTCATTACTGGCAGGTCGTTCCTGAT
CCCGGCGGCCAGTGCCGACAGGGTCTGGTGCAGCTCATCACCATGGCGACGTGCAATATCGCTACCGATGCCCTG
CTCGTCATCTTCCCCGTGCCCATCATCCTTAGCAGCCAGATGAGGCTACGACGCAAGCTACAGCTCATCATGCTC
TTCTCTCTCAGTCTATCCGTCGTCGCAGTCACCATCTATCGTCTACCGCATATCCTGCGCCAACACGGCCGCCAG
CAATATCGCTCCTTGTTGGCTTCCGTCGAGCTCATCTTCGCCACTGCTTCTGCCAATGCCCTCGTCCTGGGCTCC
TTTGTTCGCGATCGCGGCATCAAGAAGCCCAAGTTTAGGAGGCCCTCTAACGCTGATTCCTTCGACCGCGCCAGC
TATCCGAGGAGACCTACCCTTCAGCAGCAATGGGGAAGCGATGAGGACCTCGTTCGAGATGTCGGTTTGAGCCTG
GACCCGCAACTGCGAAGACCTTCGGCTACACCATCCCGACCTGTCGCCTCTCCCCGTCCGGCCAATGACCATGAC
CATGACTACAAGTCGGCGCTCCGGTCCGAGCTTCGTCGTCCGCCTCAGCCTCCGCACGAGACGCTCTCCTTTCTC
GACGTCGGAGGCTTACTGAATCATGATGATGATGATGATGATGATAATGTCACCACCCGACGCGCCGTGTCTTCC
GCCCTGCCGCCTGCTGCCTCGGTGCCGGCTTCTGCCTCGGGTTTCCGTCGAGGCTCCACGGCCTTGCTGCAGGAT
CTCGGCGGTCTCTTGGGGCCGCCCAGCTCTGGTACGACTTGGTCGTCTCCGGGAAGAGGACCACAGGCCGAATCG
CCGTCGCCGCGTGCCCACCGGTCCTATGACAGCCAGAGGGACGCGGGGCCGCCACTGATGGATCCGGGCGGCCTG
TTGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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