Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5670
Gene name
Locationscaffold_47:41736..42833
Strand-
Gene length (bp)1097
Transcript length (bp)567
Coding sequence length (bp)564
Protein length (aa) 188

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5670
MKAALALTLFGLGLANPLAEVNQIALRKPNTGAKCTLTCKNLVPIEKLGCRMSQYGCLDRKGKSCGDSGSNRGTL
CVVDGPCGAGWHGCLDDKTGQDDNLPAGTHDGHCPGDGDKCSHCRDDAGDICKDYDDKDLMKHLPCVMICLKHCE
TCTSCKLKLGKHSDHVCKHQFFGVCGHHETLSGISSEL
Coding >Ophio5|5670
ATGAAGGCAGCACTCGCTTTGACGCTTTTTGGACTTGGACTGGCCAATCCGTTGGCTGAAGTCAACCAGATTGCG
CTACGGAAGCCCAACACGGGCGCCAAATGCACGCTGACATGCAAAAACCTTGTGCCAATTGAGAAGCTTGGGTGC
CGTATGAGTCAGTACGGCTGTCTTGACCGCAAGGGCAAATCTTGCGGAGATTCAGGAAGTAACCGCGGCACCCTT
TGTGTCGTCGATGGTCCATGTGGTGCCGGTTGGCACGGCTGTCTAGACGACAAAACTGGCCAAGACGACAACTTG
CCTGCAGGAACTCACGACGGCCATTGTCCCGGCGATGGAGACAAGTGTTCACATTGTCGCGATGACGCCGGCGAC
ATCTGTAAGGACTATGATGACAAAGACTTGATGAAGCACTTGCCATGTGTCATGATCTGTTTGAAACATTGCGAA
ACTTGCACTTCATGTAAACTGAAGCTTGGCAAACATAGCGACCACGTGTGTAAGCACCAATTTTTCGGTGTTTGC
GGGCATCACGAGACTCTTTCTGGCATATCGTCCGAGCTG
Transcript >Ophio5|5670
ATGAAGGCAGCACTCGCTTTGACGCTTTTTGGACTTGGACTGGCCAATCCGTTGGCTGAAGTCAACCAGATTGCG
CTACGGAAGCCCAACACGGGCGCCAAATGCACGCTGACATGCAAAAACCTTGTGCCAATTGAGAAGCTTGGGTGC
CGTATGAGTCAGTACGGCTGTCTTGACCGCAAGGGCAAATCTTGCGGAGATTCAGGAAGTAACCGCGGCACCCTT
TGTGTCGTCGATGGTCCATGTGGTGCCGGTTGGCACGGCTGTCTAGACGACAAAACTGGCCAAGACGACAACTTG
CCTGCAGGAACTCACGACGGCCATTGTCCCGGCGATGGAGACAAGTGTTCACATTGTCGCGATGACGCCGGCGAC
ATCTGTAAGGACTATGATGACAAAGACTTGATGAAGCACTTGCCATGTGTCATGATCTGTTTGAAACATTGCGAA
ACTTGCACTTCATGTAAACTGAAGCTTGGCAAACATAGCGACCACGTGTGTAAGCACCAATTTTTCGGTGTTTGC
GGGCATCACGAGACTCTTTCTGGCATATCGTCCGAGCTGTAG
Gene >Ophio5|5670
ATGAAGGCAGCACTCGCTTTGACGCTTTTTGGACTTGGACTGGCCAATCCGTTGGCTGAAGTCAACCAGATTGCG
CTACGGAAGCCCGTGAGTATTGCAAGGAGGAGATTCTTTCTCAACCGGTCTACCCCTCACTAACACCTCTATAGA
ACACGGTATGACACAAATCTCACAGACGGCTACTCCAGATCCCCAGCTCGTTGACATGACTGGACATTGTAGGGC
GCCAAATGCACGCTGACATGCGTAAGTGGATCGTTGCAGCTCTATCATAATTGCGGGCAGCAAGCTAATGAGGAG
CGTAGAAAAACCTTGTGCCAATTGTAAGTACCGTTTGTTGAATCTTCCGGCTATCGGTGATGCTGACGCGGGTAA
CATGACAGGATACATGTGTACGACGGCCCAGAATTGTACAAAAACAACCTCGCAAGCAGTTACTGATGCAATTTG
CTCGACTCTAGGAGAAGCTTGGGTGCCGTATGAGTCAGTACGGCTGTCTTGACCGCAAGGGCGTACGTATCTGGC
TCAACTTGTTGATCTCCAACAAACCATCAGCAATATACTAACCTGAGCACTACAACCGCAGAAATCTTGCGGAGA
TTCAGGAAGTAACCGCGGCACCCTTTGTGTCGTCGATGGTCCATGTGGTGCCGGTTGGCACGGCTGTCTAGACGA
CAAAACTGGCCAAGACGACAACTTGCCTGCAGGAACTCACGACGGCCATTGTCCCGGCGATGGAGACAAGTGTTC
ACATTGTCGCGATGACGCCGGCGACATCTGTAAGGACTATGATGACAAAGACTTGATGAAGCACTTGCCATGTGT
CATGATCTGTGTAAGTCGCGTCTATCGACATCATTTGAAGCAATGGCTAACTAGTTGGCAATGCAATAGTTGAAA
CATTGCGAAACTTGCACTTCATGTAAACTGAAGCTTGGCAAACATAGCGACCACGTGTGTAAGCACCAATTTGTG
AGTCCTCATTACGTGTATGAAGTATTGGCGAGAGCTCCAGGCAATGAATTAACGTTGCTGGTATCAAGTTCGGTG
TTTGCGGGCATCACGAGACTCTTTCTGGCATATCGTCCGAGCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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