Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5652
Gene name
Locationscaffold_469:8092..9390
Strand+
Gene length (bp)1298
Transcript length (bp)1014
Coding sequence length (bp)1011
Protein length (aa) 337

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5652
MIDPSPGCAKLCLMLLVFCSFGYASHATAPPTAASTSVPKATPTTAHIFLPYYSREAWLPLRGSVLSINAKANET
AYDIFCPVQTPPPCDLSLDFPFIVTRGSNMIRFHGTLTSTYTANLECKVAESATVATCSGYSSYRSGYTNGLITG
PTEISWTSTLTTEVEWGVLTMANKPKATGHHIEVAASKNAAPSTSSMNGLPLLSQSLWMFVGRGAGACEAEAANE
ADEPESSNANENVERGHARVGRRPWKKMKRIADGGGGAIGSASMSTVPLQGRCLAVPFISLELRFSHGPTKSLEL
HAGGGDDRFRSGRARIYTRRVDERLPIVPHGGYGHGL
Coding >Ophio5|5652
ATGATCGACCCTAGTCCAGGATGCGCCAAACTCTGTCTGATGCTGCTGGTATTCTGCTCTTTTGGCTACGCCAGC
CATGCGACTGCGCCTCCGACGGCCGCGTCGACTTCGGTCCCCAAGGCCACGCCGACGACGGCTCACATCTTCCTT
CCTTACTACTCTCGGGAAGCCTGGCTCCCGTTGCGGGGCAGCGTCCTTTCAATCAATGCCAAGGCCAACGAGACG
GCATATGATATATTCTGCCCGGTGCAGACGCCGCCGCCTTGCGACCTGTCACTCGATTTCCCCTTTATCGTCACA
CGAGGCTCCAACATGATTCGATTTCACGGGACACTTACGTCTACCTATACCGCCAATCTCGAGTGCAAGGTGGCC
GAATCGGCGACAGTGGCGACATGTTCGGGCTACTCGAGCTACAGGTCGGGCTATACGAACGGCCTCATCACGGGC
CCGACAGAGATCTCGTGGACGTCAACACTGACTACCGAGGTCGAGTGGGGAGTGCTCACCATGGCGAACAAGCCC
AAGGCAACGGGCCACCACATTGAGGTAGCGGCGTCGAAAAACGCGGCGCCCTCGACCAGCTCTATGAACGGGCTT
CCCCTCTTGTCTCAATCGCTATGGATGTTTGTCGGGCGCGGCGCTGGCGCATGCGAGGCTGAGGCGGCCAATGAA
GCAGACGAGCCGGAAAGCAGCAACGCCAACGAGAATGTTGAGAGGGGCCACGCGAGAGTCGGGCGCCGGCCGTGG
AAGAAGATGAAGCGGATCGCTGACGGGGGGGGGGGGGCGATAGGATCGGCGTCTATGTCTACGGTACCTTTGCAG
GGGAGGTGTCTTGCTGTGCCCTTCATCTCCCTTGAGCTCCGCTTCTCACATGGCCCGACTAAATCCCTAGAGTTG
CATGCAGGGGGTGGGGATGACCGTTTCAGAAGTGGCCGTGCACGAATATATACGAGGCGGGTGGATGAGCGGCTA
CCTATTGTGCCGCATGGAGGGTACGGTCATGGCTTG
Transcript >Ophio5|5652
ATGATCGACCCTAGTCCAGGATGCGCCAAACTCTGTCTGATGCTGCTGGTATTCTGCTCTTTTGGCTACGCCAGC
CATGCGACTGCGCCTCCGACGGCCGCGTCGACTTCGGTCCCCAAGGCCACGCCGACGACGGCTCACATCTTCCTT
CCTTACTACTCTCGGGAAGCCTGGCTCCCGTTGCGGGGCAGCGTCCTTTCAATCAATGCCAAGGCCAACGAGACG
GCATATGATATATTCTGCCCGGTGCAGACGCCGCCGCCTTGCGACCTGTCACTCGATTTCCCCTTTATCGTCACA
CGAGGCTCCAACATGATTCGATTTCACGGGACACTTACGTCTACCTATACCGCCAATCTCGAGTGCAAGGTGGCC
GAATCGGCGACAGTGGCGACATGTTCGGGCTACTCGAGCTACAGGTCGGGCTATACGAACGGCCTCATCACGGGC
CCGACAGAGATCTCGTGGACGTCAACACTGACTACCGAGGTCGAGTGGGGAGTGCTCACCATGGCGAACAAGCCC
AAGGCAACGGGCCACCACATTGAGGTAGCGGCGTCGAAAAACGCGGCGCCCTCGACCAGCTCTATGAACGGGCTT
CCCCTCTTGTCTCAATCGCTATGGATGTTTGTCGGGCGCGGCGCTGGCGCATGCGAGGCTGAGGCGGCCAATGAA
GCAGACGAGCCGGAAAGCAGCAACGCCAACGAGAATGTTGAGAGGGGCCACGCGAGAGTCGGGCGCCGGCCGTGG
AAGAAGATGAAGCGGATCGCTGACGGGGGGGGGGGGGCGATAGGATCGGCGTCTATGTCTACGGTACCTTTGCAG
GGGAGGTGTCTTGCTGTGCCCTTCATCTCCCTTGAGCTCCGCTTCTCACATGGCCCGACTAAATCCCTAGAGTTG
CATGCAGGGGGTGGGGATGACCGTTTCAGAAGTGGCCGTGCACGAATATATACGAGGCGGGTGGATGAGCGGCTA
CCTATTGTGCCGCATGGAGGGTACGGTCATGGCTTGTAG
Gene >Ophio5|5652
ATGATCGACCCTAGTCCAGGATGCGCCAAACTCTGTCTGATGCTGCTGGTATTCTGCTCTTTTGGCTACGCCAGC
CATGCGACTGCGCCTCCGACGGCCGCGTCGACTTCGGTCCCCAAGGCCACGCCGACGACGGCTCACATCTTCCTT
CCTTACTACTCTCGGGAAGCCTGGCTCCCGTTGCGGGGCAGCGTCCTTTCAATCGCACGTATTGCCCTCGATGCG
TTCCCGCGGCCGGCCGCTGACACGAAGAACAGAATGCCAAGGCCAACGAGACGGCATATGATATATTCTGCCCGG
TGCAGACGCCGCCGCCTTGCGACCTGTCACTCGATTTCCCCTTTATCGTCACACGAGGCTCCAACATGATTCGAT
TTCACGGGACACTTACGTCTACCTAGTGAGTCTACTTGGGCGGCCGGTGACAGCTGCGGCGCGCTGACGAGCTGG
CGCGTCTAGTACCGCCAATCTCGAGTGCAAGGTGGCCGAATCGGCGACAGTGGCGACATGTTCGGGCTACTCGAG
CTACAGGTCGGGCTATACGAACGGCCTCATCACGGGCCCGACAGAGATCTCGTGGACGTCAACACTGACTACCGA
GGTCGAGTGGGGAGTGCTCACCATGGCGAACAAGCCCAAGGCAACGGGCCACCACATTGAGGTAGCGGCGTCGAA
AAACGCGGCGCCCTCGACCAGCTCGTCGACGTTGCAGTTGCCGATGATGGCATGCATTCTAGCGGTGGCCCTCAT
ATTCTGCTACGTCGGCCTAGTATGAACGGGCTTCCCCTCTTGTCTCAATCGCTATGGATGTTTGTCGGGCGCGGC
GCTGGCGCATGCGAGGCTGAGGCGGCCAATGAAGCAGACGAGCCGGAAAGCAGCAACGCCAACGAGAATGTTGAG
AGGGGCCACGCGAGAGTCGGGTCGGCCACTGTTAATTAGAGCTTCGGCGTCGAAGACAGGAAGAGCAAAGGCGCC
GGCCGTGGAAGAAGATGAAGCGGATCGCTGACGGGGGGGGGGGGGCGATAGGATCGGTATGTGTACGATTGAGCC
GGCTCACCTGCTTCTTTACTGACTGTTTGCAGGCGTCTATGTCTACGGTACCTTTGCAGGGGAGGTGTCTTGCTG
TGCCCTTCATCTCCCTTGAGCTCCGCTTCTCACATGGCCCGACTAAATCCCTAGAGTTGCATGCAGGGGGTGGGG
ATGACCGTTTCAGAAGTGGCCGTGCACGAATATATACGAGGCGGGTGGATGAGCGGCTACCTATTGTGCCGCATG
GAGGGTACGGTCATGGCTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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