Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5650
Gene name
Locationscaffold_469:1171..3046
Strand+
Gene length (bp)1875
Transcript length (bp)1623
Coding sequence length (bp)1620
Protein length (aa) 540

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 6.6E-22 83 220

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 66 538 1.0E-44
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 61 539 1.0E-33
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 81 529 4.0E-21
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 55 281 6.0E-11
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 90 328 7.0E-11
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Swissprot ID Swissprot Description Start End E-value
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 66 538 1.0E-44
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 61 539 1.0E-33
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 81 529 4.0E-21
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 55 281 6.0E-11
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 90 328 7.0E-11
sp|Q6Z955|CKX11_ORYSJ Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 79 247 1.0E-10
sp|Q6YW51|CKX6_ORYSJ Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 79 247 5.0E-10
sp|Q6YW50|CKX7_ORYSJ Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 79 247 1.0E-09
sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 83 256 5.0E-09
sp|Q9FUJ2|CKX4_ARATH Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana GN=CKX4 PE=1 SV=2 81 255 6.0E-09
sp|Q9FUJ3|CKX2_ARATH Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 35 256 7.0E-09
sp|Q9T0N8|CKX1_MAIZE Cytokinin dehydrogenase 1 OS=Zea mays GN=CKX1 PE=1 SV=2 80 247 9.0E-09
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 108 233 1.0E-07
sp|A3AVP1|CKX8_ORYSJ Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 152 247 3.0E-07
sp|A2XVN3|CKX8_ORYSI Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 152 247 3.0E-07
sp|Q0JQ12|CKX1_ORYSJ Cytokinin dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CKX1 PE=3 SV=2 83 247 1.0E-06
sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 82 247 2.0E-06
sp|Q54H55|Y8969_DICDI FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 57 252 6.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901265 nucleoside phosphate binding No
GO:0000166 nucleotide binding No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5650
MYLLSVLLSLYGFVAEATTLLSRASSSLPPDVENVCHLILSKYPSFLVWDPTGPWGFRTASQASMYNEAVTSYLS
VASISQRPACILFPSNAAQVSYAVRLLNSHPGVRFGLKSGGHNGNLGFSTAPGGLLIAFRPNSRFAVPAPNGRSV
LVGAGCKWKDVYEVLQPLGKAAVGARFDDVGVTGYILGGGLSYLSAQYGFACDNVLSFKCVLANGTIVTASRKSH
PDLYFALRGGGNQFAIVTSMRLRTHHVGRRGLIWGGMRIYAATQHDALLDAIAKFTAEGNDPKAAIFPVFGFGTD
KQANFPLTIVVYFYDGLKPSSVFDGFDRIPSLFSDTGPTAFRKLHEQLDGGNIQGIHVAHRMNSFPNMPPAVMSD
FLREHYTKLQTYADTASTVKLIEMKVFSFDAQPIHHTIAQASKRIGGGNALNLDPSHGDRLWIAYYLAWTNSSCD
EACPKFLQSVSNAMRKFHKEHYAGVLPTHYAQGDLDFLSYNPIYMNHAMHDQKVLQSYGNATYQRLKAIHAAYDP
HGLFSQRQGGFHFTD
Coding >Ophio5|5650
ATGTACCTCCTATCCGTGCTGCTCTCCCTTTACGGCTTCGTCGCCGAGGCAACAACACTTCTTTCCCGAGCCTCG
TCATCTCTCCCCCCCGATGTCGAGAACGTCTGTCACCTCATCCTCTCCAAATACCCCAGCTTTCTGGTCTGGGAC
CCGACCGGTCCCTGGGGCTTCCGAACAGCCAGCCAGGCGTCCATGTACAATGAGGCCGTGACAAGCTATCTGAGC
GTCGCAAGTATATCGCAACGCCCAGCCTGTATCTTATTCCCCTCCAATGCCGCCCAGGTCTCCTATGCCGTCCGA
CTCCTTAATTCTCACCCGGGCGTCCGCTTCGGTCTCAAGTCTGGGGGGCATAATGGCAACCTCGGCTTCTCCACC
GCGCCCGGCGGCCTTCTTATTGCCTTCCGCCCTAACTCACGCTTCGCGGTGCCTGCCCCAAACGGCCGCTCTGTC
TTGGTCGGCGCCGGTTGTAAGTGGAAGGACGTCTACGAGGTTCTTCAACCGCTTGGAAAGGCGGCCGTCGGCGCC
CGCTTCGATGACGTTGGTGTCACTGGCTATATCCTTGGCGGCGGGCTCTCTTACTTATCTGCTCAATACGGCTTT
GCTTGCGACAATGTGCTCAGCTTCAAGTGCGTCCTCGCCAATGGCACTATCGTCACAGCCAGCCGGAAGTCACAC
CCAGACTTGTACTTTGCCCTACGCGGCGGCGGCAATCAGTTCGCTATTGTGACGAGCATGAGGCTGCGAACCCAC
CATGTTGGGCGAAGAGGCCTTATTTGGGGCGGCATGCGCATCTACGCAGCGACTCAGCATGATGCTCTACTGGAT
GCTATTGCGAAATTTACTGCAGAGGGCAACGATCCCAAGGCGGCCATTTTCCCCGTCTTTGGCTTTGGTACCGAC
AAGCAAGCCAATTTCCCGCTCACCATCGTCGTCTACTTCTATGACGGGCTTAAACCGAGTAGTGTATTCGATGGG
TTCGACCGTATTCCTTCCTTGTTTAGCGATACAGGACCGACAGCCTTTAGGAAACTTCATGAGCAGCTTGATGGA
GGCAACATTCAAGGGATCCACGTTGCTCACCGGATGAATTCGTTCCCTAACATGCCTCCTGCCGTCATGTCTGAC
TTCCTCAGAGAGCACTACACCAAGCTTCAGACGTATGCCGACACGGCGTCTACTGTCAAACTAATAGAAATGAAG
GTTTTCAGCTTCGACGCACAACCAATACATCATACCATTGCTCAAGCCTCAAAACGTATAGGAGGGGGCAACGCG
CTGAACTTGGATCCCAGCCACGGGGACCGCCTTTGGATTGCATACTATTTGGCCTGGACCAATTCCAGTTGCGAT
GAAGCGTGCCCGAAATTCCTCCAGAGCGTCTCCAACGCGATGCGAAAATTCCATAAGGAGCACTATGCCGGCGTC
CTTCCAACTCACTATGCCCAGGGCGACTTGGATTTCCTGAGCTACAATCCTATCTACATGAACCACGCAATGCAC
GATCAAAAGGTGTTACAGAGTTACGGCAATGCGACCTATCAGAGACTCAAGGCAATCCACGCGGCATATGATCCT
CACGGCCTCTTTTCCCAGCGGCAGGGAGGTTTTCATTTCACAGAC
Transcript >Ophio5|5650
ATGTACCTCCTATCCGTGCTGCTCTCCCTTTACGGCTTCGTCGCCGAGGCAACAACACTTCTTTCCCGAGCCTCG
TCATCTCTCCCCCCCGATGTCGAGAACGTCTGTCACCTCATCCTCTCCAAATACCCCAGCTTTCTGGTCTGGGAC
CCGACCGGTCCCTGGGGCTTCCGAACAGCCAGCCAGGCGTCCATGTACAATGAGGCCGTGACAAGCTATCTGAGC
GTCGCAAGTATATCGCAACGCCCAGCCTGTATCTTATTCCCCTCCAATGCCGCCCAGGTCTCCTATGCCGTCCGA
CTCCTTAATTCTCACCCGGGCGTCCGCTTCGGTCTCAAGTCTGGGGGGCATAATGGCAACCTCGGCTTCTCCACC
GCGCCCGGCGGCCTTCTTATTGCCTTCCGCCCTAACTCACGCTTCGCGGTGCCTGCCCCAAACGGCCGCTCTGTC
TTGGTCGGCGCCGGTTGTAAGTGGAAGGACGTCTACGAGGTTCTTCAACCGCTTGGAAAGGCGGCCGTCGGCGCC
CGCTTCGATGACGTTGGTGTCACTGGCTATATCCTTGGCGGCGGGCTCTCTTACTTATCTGCTCAATACGGCTTT
GCTTGCGACAATGTGCTCAGCTTCAAGTGCGTCCTCGCCAATGGCACTATCGTCACAGCCAGCCGGAAGTCACAC
CCAGACTTGTACTTTGCCCTACGCGGCGGCGGCAATCAGTTCGCTATTGTGACGAGCATGAGGCTGCGAACCCAC
CATGTTGGGCGAAGAGGCCTTATTTGGGGCGGCATGCGCATCTACGCAGCGACTCAGCATGATGCTCTACTGGAT
GCTATTGCGAAATTTACTGCAGAGGGCAACGATCCCAAGGCGGCCATTTTCCCCGTCTTTGGCTTTGGTACCGAC
AAGCAAGCCAATTTCCCGCTCACCATCGTCGTCTACTTCTATGACGGGCTTAAACCGAGTAGTGTATTCGATGGG
TTCGACCGTATTCCTTCCTTGTTTAGCGATACAGGACCGACAGCCTTTAGGAAACTTCATGAGCAGCTTGATGGA
GGCAACATTCAAGGGATCCACGTTGCTCACCGGATGAATTCGTTCCCTAACATGCCTCCTGCCGTCATGTCTGAC
TTCCTCAGAGAGCACTACACCAAGCTTCAGACGTATGCCGACACGGCGTCTACTGTCAAACTAATAGAAATGAAG
GTTTTCAGCTTCGACGCACAACCAATACATCATACCATTGCTCAAGCCTCAAAACGTATAGGAGGGGGCAACGCG
CTGAACTTGGATCCCAGCCACGGGGACCGCCTTTGGATTGCATACTATTTGGCCTGGACCAATTCCAGTTGCGAT
GAAGCGTGCCCGAAATTCCTCCAGAGCGTCTCCAACGCGATGCGAAAATTCCATAAGGAGCACTATGCCGGCGTC
CTTCCAACTCACTATGCCCAGGGCGACTTGGATTTCCTGAGCTACAATCCTATCTACATGAACCACGCAATGCAC
GATCAAAAGGTGTTACAGAGTTACGGCAATGCGACCTATCAGAGACTCAAGGCAATCCACGCGGCATATGATCCT
CACGGCCTCTTTTCCCAGCGGCAGGGAGGTTTTCATTTCACAGACTGA
Gene >Ophio5|5650
ATGTACCTCCTATCCGTGCTGCTCTCCCTTTACGGCTTCGTCGCCGAGGCAACAACACTTCTTTCCCGAGCCTCG
TCATCTCTCCCCCCCGATGTCGAGAACGTCTGTCACCTCATCCTCTCCAAATACCCCAGCTTTCTGGTCTGGGAC
CCGACCGGTCCCTGGGGCTTCCGAACAGCCAGCCAGGCGTCCATGTACAATGAGGCCGTGACAAGCTATCTGAGC
GTCGCAAGTATATCGCAACGCCCAGCCTGTATCTTATTCCCCTCCAATGCCGCCCAGGTCTCCTATGCCGTCCGA
CTCCTTAATTCTCACCCGGGCGTCCGCTTCGGTCTCAAGTCTGGGGGGCATAATGGCAACCTCGGCTTCTCCACC
GCGCCCGGCGGCCTTCTTATTGCCTTCCGCCCTAACTCACGCTTCGCGGTGCCTGCCCCAAACGGCCGCTCTGTC
TTGGTCGGCGCCGGTTGTAAGTGGAAGGACGTCTACGAGGTTCTTCAACCGCTTGGAAAGGCGGCCGTCGGCGCC
CGCTTCGATGACGTTGGTGTCACTGGCTATATCCTTGGCGGCGGGCTCTCTTACTTATCTGCTCAATACGTACGG
ACACCCTCTCTTCCCACCTTTCTTCCCATCCAGATTGACTGACAACGCAAGACTGTAACGGTATAGGGCTTTGCT
TGCGACAATGTGCTCAGCTTCAAGTGCGTCCTCGCCAATGGCACTATCGTCACAGCCAGCCGGAAGTCACACCCA
GACTTGTACTTTGCCCTACGCGGCGGCGGCAATCAGTTCGCTATTGTGACGAGCATGAGGCTGCGAACCCACCAT
GTTGGGCGAAGAGGCCTTATTTGGGGCGGCATGCGCATCTACGCAGCGACTCAGCATGATGCTCTACTGGATGCT
ATTGCGAAATTTACTGCAGAGGGCAACGATCCCAAGGCGGCCATTTTCCCCGTCTTTGGCTTTGGTACCGACAAG
CAAGCCAATTTCCCGCTCACCATCGTCGTCTACTTCTATGACGGGCTTAAACCGAGTAGTGTATTCGATGGGTTC
GACCGTATTCCTTCCTTGTTTAGCGATACAGGACCGACAGCCTTTAGGAAACTTCATGAGCAGCTTGATGGAGGC
AACATTCAAGGGATCCACGTTGCTCACCGGATGAATTCGTTCCCTAACATGCCTCCTGCCGTCATGTCTGACTTC
CTCAGAGAGCACTACACCAAGCTTCAGACGTATGCCGACACGGCGTCTACTGTCAAACTAATAGAAATGAAGGTT
TTCAGCTTCGACGCACAACCAATACATCATACCATTGCTCAAGCCTCAAAACGTATAGGAGGGGGCAACGCGCTG
AACTTGGATCCCAGCCACGGGGACCGCCTTTGGATTGCATACTATTTGGCCTGGACCAATTCCAGTTGCGATGAA
GCGTGCCCGAAATTCCTCCAGAGCGTCTCCAACGCGATGCGAAAATTCCATAAGGAGCACTATGCCGGCGTCCTT
CCAACTCACTATGCCCAGGGCGACTTGGATTTCCTGAGGCAAGCAGACATCTTTCCTCTCAACCACCTACACATG
TCTAAGTTTTTTTCCCCTTTATTCCAGACATATTCTATCTCTGTGTCTTCATAAAATTCTTCTCGACTTCTCAAG
TTCTTTTTTTTTTATCCTCAAGTCCGTTCATTGACTTGAACCCAGTAGTTTGCTAACCTATGTCGCAGCTACAAT
CCTATCTACATGAACCACGCAATGCACGATCAAAAGGTGTTACAGAGTTACGGCAATGCGACCTATCAGAGACTC
AAGGCAATCCACGCGGCATATGATCCTCACGGCCTCTTTTCCCAGCGGCAGGGAGGTTTTCATTTCACAGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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