© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5626 |
| Gene name | |
| Location | scaffold_465:13821..15917 |
| Strand | - |
| Gene length (bp) | 2096 |
| Transcript length (bp) | 1746 |
| Coding sequence length (bp) | 1743 |
| Protein length (aa) | 581 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00860 | Xan_ur_permease | Permease family | 1.9E-25 | 93 | 473 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94300|YOOH_SCHPO | Putative xanthine/uracil permease C887.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.17 PE=3 SV=1 | 2 | 580 | 0.0E+00 |
| sp|Q9SRK7|AZG1_ARATH | Adenine/guanine permease AZG1 OS=Arabidopsis thaliana GN=AZG1 PE=2 SV=1 | 4 | 491 | 3.0E-140 |
| sp|Q84MA8|AZG2_ARATH | Adenine/guanine permease AZG2 OS=Arabidopsis thaliana GN=AZG2 PE=2 SV=1 | 7 | 487 | 6.0E-121 |
| sp|Q57772|Y326_METJA | Putative permease MJ0326 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0326 PE=3 SV=1 | 16 | 497 | 4.0E-56 |
| sp|O34987|PBUG_BACSU | Guanine/hypoxanthine permease PbuG OS=Bacillus subtilis (strain 168) GN=pbuG PE=1 SV=1 | 19 | 476 | 5.0E-55 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94300|YOOH_SCHPO | Putative xanthine/uracil permease C887.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.17 PE=3 SV=1 | 2 | 580 | 0.0E+00 |
| sp|Q9SRK7|AZG1_ARATH | Adenine/guanine permease AZG1 OS=Arabidopsis thaliana GN=AZG1 PE=2 SV=1 | 4 | 491 | 3.0E-140 |
| sp|Q84MA8|AZG2_ARATH | Adenine/guanine permease AZG2 OS=Arabidopsis thaliana GN=AZG2 PE=2 SV=1 | 7 | 487 | 6.0E-121 |
| sp|Q57772|Y326_METJA | Putative permease MJ0326 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0326 PE=3 SV=1 | 16 | 497 | 4.0E-56 |
| sp|O34987|PBUG_BACSU | Guanine/hypoxanthine permease PbuG OS=Bacillus subtilis (strain 168) GN=pbuG PE=1 SV=1 | 19 | 476 | 5.0E-55 |
| sp|O34978|PBUO_BACSU | Guanine/hypoxanthine permease PbuO OS=Bacillus subtilis (strain 168) GN=pbuO PE=1 SV=1 | 29 | 476 | 2.0E-54 |
| sp|P31440|ADEQ_ECOLI | Adenine permease AdeQ OS=Escherichia coli (strain K12) GN=adeQ PE=1 SV=3 | 38 | 476 | 1.0E-52 |
| sp|P31466|ADEP_ECOLI | Adenine permease AdeP OS=Escherichia coli (strain K12) GN=adeP PE=1 SV=2 | 38 | 487 | 3.0E-48 |
| sp|P0AF52|GHXP_ECOLI | Guanine/hypoxanthine permease GhxP OS=Escherichia coli (strain K12) GN=ghxP PE=1 SV=1 | 19 | 477 | 2.0E-32 |
| sp|P0AF53|GHXP_ECO57 | Guanine/hypoxanthine permease GhxP OS=Escherichia coli O157:H7 GN=ghxP PE=3 SV=1 | 19 | 477 | 2.0E-32 |
| sp|P44530|Y125_HAEIN | Putative permease HI_0125 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0125 PE=3 SV=1 | 29 | 477 | 6.0E-30 |
| sp|Q46817|GHXQ_ECOLI | Guanine/hypoxanthine permease GhxQ OS=Escherichia coli (strain K12) GN=ghxQ PE=1 SV=2 | 39 | 477 | 9.0E-27 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| 2 | 102 | 124 | 22 |
| 3 | 144 | 166 | 22 |
| 4 | 186 | 208 | 22 |
| 5 | 238 | 257 | 19 |
| 6 | 324 | 346 | 22 |
| 7 | 366 | 388 | 22 |
| 8 | 401 | 423 | 22 |
| 9 | 428 | 450 | 22 |
| 10 | 471 | 493 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 23.08 | 11.43 | 34.74 |
| CcL | In ants, during behavior modification | 189.82 | 84.36 | 295.28 |
| CcD | In ants, recently dead | 138.10 | 71.83 | 204.38 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.000286 | yes |
| CcL | CcD | 0.234605 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5626 MGWVHTVNGRVAASPVGRWFRLDGCGHPLARKDSFFLTEIRAGLATFFAMAYIIAVNSSIVADSGGSCVCRRTPE DPNCDGDVGYMLCVQAVKRDAVTATAAISCLASVCMGLFANLPIGLAPGMGLNAYFAYTVVGYHGKGPVPYQVAL TAIFVEGFIFLFLALIGMRQWLARAIPHSIKVATGVGIGLFLALIGLTYSEGIGLVLGATTTPTQLAGCSPSQLR EGACPGAEKMRNPAMWLGIFGGGILTVLLAMYRVRGAVIVGIILVSLVSWPRDTLVTAFPRTELGDSAFDFFRHV VSFHPIRRILHVQRWDVAEYGAQFGLALVTFLYVDILDCTGTLYGMARFAGLLDPVTHDFEGSSVAYVVDALSIS VGAVFGLPPVTAFVESGAGISEGGKTGLTAVVTGLCFLVAVFFAPIFASIPPWATGCVLVLVGSMMAASVIEINW KYMGDAVPAFLAVALMPFTYSIANGLIGSIGCYAVLNTVVWLLKVVSRGRIVPPNYADKEPWTWRIPGGVFPPWI VRLARGDKRFWRRDAPSPNQDSLCRQRKLSSEPGADRSSSAETSSVRGSESRANDR |
| Coding | >Ophio5|5626 ATGGGCTGGGTCCATACTGTCAACGGCCGGGTTGCGGCCAGTCCCGTGGGCCGTTGGTTCCGCCTCGACGGCTGC GGCCATCCTCTCGCCCGCAAAGACTCCTTCTTTCTGACCGAGATCCGCGCCGGCCTGGCCACCTTCTTCGCCATG GCCTACATCATCGCCGTCAACTCCTCCATCGTCGCCGACTCGGGCGGCTCCTGCGTGTGCCGCCGCACGCCCGAA GACCCTAACTGCGACGGCGACGTGGGCTACATGTTGTGCGTGCAGGCTGTAAAGCGTGATGCAGTCACTGCCACT GCGGCCATCTCTTGCCTGGCATCGGTGTGCATGGGCCTGTTTGCCAACTTACCCATTGGCCTTGCTCCCGGCATG GGTCTCAACGCCTACTTCGCCTACACTGTCGTCGGCTACCACGGCAAAGGCCCCGTCCCCTATCAAGTCGCCCTC ACGGCCATCTTCGTCGAAGGCTTCATCTTCCTCTTCCTCGCCCTCATCGGCATGCGGCAGTGGCTCGCTCGGGCC ATCCCCCACTCCATCAAGGTGGCGACGGGCGTCGGCATCGGCCTCTTCCTAGCTCTCATCGGCCTGACCTACAGC GAGGGCATCGGACTCGTCCTCGGCGCCACGACGACGCCTACCCAGCTCGCTGGCTGCTCACCCTCGCAGCTGCGG GAGGGCGCGTGTCCTGGCGCGGAGAAGATGCGCAATCCGGCCATGTGGCTGGGCATCTTTGGAGGTGGCATCTTG ACCGTGTTGCTGGCCATGTATCGTGTTCGTGGAGCCGTCATCGTCGGCATCATCCTCGTTAGCCTCGTCTCCTGG CCGAGGGATACGCTTGTCACCGCCTTTCCGCGTACGGAGCTGGGCGACAGCGCATTCGACTTCTTCCGTCACGTC GTCAGCTTTCATCCTATCCGCCGCATACTCCATGTTCAGCGCTGGGACGTAGCCGAGTACGGTGCTCAGTTCGGC CTCGCCCTCGTCACCTTTCTCTACGTCGATATCCTCGACTGCACGGGCACGCTGTACGGCATGGCTCGCTTCGCT GGCCTCCTCGATCCTGTGACGCACGACTTCGAGGGCTCGTCGGTTGCCTACGTCGTCGACGCGCTCAGCATCTCC GTCGGCGCCGTCTTCGGCCTTCCCCCCGTCACGGCCTTTGTCGAGTCCGGCGCCGGCATCTCCGAGGGTGGAAAG ACGGGCTTGACAGCCGTCGTGACGGGGCTATGCTTCCTCGTTGCCGTCTTCTTTGCCCCCATCTTCGCCTCTATC CCGCCCTGGGCCACCGGCTGCGTCCTCGTCCTGGTCGGCTCCATGATGGCCGCCTCCGTCATCGAGATCAACTGG AAGTACATGGGCGACGCTGTGCCCGCCTTTCTGGCCGTTGCCCTGATGCCTTTTACCTACTCCATCGCCAACGGT CTCATCGGCAGCATCGGCTGCTATGCCGTTCTCAACACCGTCGTCTGGCTGCTCAAAGTCGTCTCGCGCGGCCGC ATCGTGCCCCCCAACTACGCCGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCGTCTTCCCGCCCTGGATC GTCCGCCTTGCCAGGGGCGACAAGCGCTTCTGGCGCCGAGACGCGCCGTCGCCTAACCAAGATTCTCTGTGCCGT CAGCGAAAGCTCAGTTCCGAGCCGGGCGCCGACCGGAGCTCCTCTGCGGAGACAAGCTCGGTCAGGGGCTCGGAA AGCAGGGCCAACGACCGT |
| Transcript | >Ophio5|5626 ATGGGCTGGGTCCATACTGTCAACGGCCGGGTTGCGGCCAGTCCCGTGGGCCGTTGGTTCCGCCTCGACGGCTGC GGCCATCCTCTCGCCCGCAAAGACTCCTTCTTTCTGACCGAGATCCGCGCCGGCCTGGCCACCTTCTTCGCCATG GCCTACATCATCGCCGTCAACTCCTCCATCGTCGCCGACTCGGGCGGCTCCTGCGTGTGCCGCCGCACGCCCGAA GACCCTAACTGCGACGGCGACGTGGGCTACATGTTGTGCGTGCAGGCTGTAAAGCGTGATGCAGTCACTGCCACT GCGGCCATCTCTTGCCTGGCATCGGTGTGCATGGGCCTGTTTGCCAACTTACCCATTGGCCTTGCTCCCGGCATG GGTCTCAACGCCTACTTCGCCTACACTGTCGTCGGCTACCACGGCAAAGGCCCCGTCCCCTATCAAGTCGCCCTC ACGGCCATCTTCGTCGAAGGCTTCATCTTCCTCTTCCTCGCCCTCATCGGCATGCGGCAGTGGCTCGCTCGGGCC ATCCCCCACTCCATCAAGGTGGCGACGGGCGTCGGCATCGGCCTCTTCCTAGCTCTCATCGGCCTGACCTACAGC GAGGGCATCGGACTCGTCCTCGGCGCCACGACGACGCCTACCCAGCTCGCTGGCTGCTCACCCTCGCAGCTGCGG GAGGGCGCGTGTCCTGGCGCGGAGAAGATGCGCAATCCGGCCATGTGGCTGGGCATCTTTGGAGGTGGCATCTTG ACCGTGTTGCTGGCCATGTATCGTGTTCGTGGAGCCGTCATCGTCGGCATCATCCTCGTTAGCCTCGTCTCCTGG CCGAGGGATACGCTTGTCACCGCCTTTCCGCGTACGGAGCTGGGCGACAGCGCATTCGACTTCTTCCGTCACGTC GTCAGCTTTCATCCTATCCGCCGCATACTCCATGTTCAGCGCTGGGACGTAGCCGAGTACGGTGCTCAGTTCGGC CTCGCCCTCGTCACCTTTCTCTACGTCGATATCCTCGACTGCACGGGCACGCTGTACGGCATGGCTCGCTTCGCT GGCCTCCTCGATCCTGTGACGCACGACTTCGAGGGCTCGTCGGTTGCCTACGTCGTCGACGCGCTCAGCATCTCC GTCGGCGCCGTCTTCGGCCTTCCCCCCGTCACGGCCTTTGTCGAGTCCGGCGCCGGCATCTCCGAGGGTGGAAAG ACGGGCTTGACAGCCGTCGTGACGGGGCTATGCTTCCTCGTTGCCGTCTTCTTTGCCCCCATCTTCGCCTCTATC CCGCCCTGGGCCACCGGCTGCGTCCTCGTCCTGGTCGGCTCCATGATGGCCGCCTCCGTCATCGAGATCAACTGG AAGTACATGGGCGACGCTGTGCCCGCCTTTCTGGCCGTTGCCCTGATGCCTTTTACCTACTCCATCGCCAACGGT CTCATCGGCAGCATCGGCTGCTATGCCGTTCTCAACACCGTCGTCTGGCTGCTCAAAGTCGTCTCGCGCGGCCGC ATCGTGCCCCCCAACTACGCCGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCGTCTTCCCGCCCTGGATC GTCCGCCTTGCCAGGGGCGACAAGCGCTTCTGGCGCCGAGACGCGCCGTCGCCTAACCAAGATTCTCTGTGCCGT CAGCGAAAGCTCAGTTCCGAGCCGGGCGCCGACCGGAGCTCCTCTGCGGAGACAAGCTCGGTCAGGGGCTCGGAA AGCAGGGCCAACGACCGTTAG |
| Gene | >Ophio5|5626 ATGGGCTGGGTCCATACTGTCAACGGCCGGGTTGCGGCCAGTCCCGTGGGCCGTTGGTTCCGCCTCGACGGCTGC GGCCATGTAAGATGATCCATTTCCTCTTGTCTGTGCGTCGGTGCCGTTGTGTCCTATACATGGACATCTATATCT CGGACTTCTATACATGACAGATCTAAAACGACAAAGATGCCTATACATCATATAACCCCCATCACGCACACACCA GAGACCGGCTAACCATGCACCAGCCTCTCGCCCGCAAAGACTCCTTCTTTCTGACCGAGATCCGCGCCGGCCTGG CCACCTTCTTCGCCATGGCCTACATCATCGCCGTCAACTCCTCCATCGTCGCCGACTCGGGCGGCTCCTGCGTGT GCCGCCGCACGCCCGAAGACCCTAACTGCGACGGCGACGTGGGCTACATGTTGTGCGTGCAGGCTGTAAAGCGTG ATGCAGTCACTGCCACTGCGGCCATCTCTTGCCTGGCATCGGTGTGCATGGGCCTGTTTGCCAACTTGTCAGTCT CTAGTGCTTCTTCGATTATGTCTCTTGACTAACACTGTCCTTGACTGAACAGACCCATTGGCCTTGCTCCCGGCA TGGGTGAGTCCATCATTTGCGGTGAATAATTAGCATTGGACAAGAGGACTCATTTCTTACAAGGTCTCAACGCCT ACTTCGCCTACACTGTCGGTGAGTAAAAAGGGAAAAAAAAAACATTTACCCCTGAGCCTCGCCCCAGCTAACCAC CTCCAGTCGGCTACCACGGCAAAGGCCCCGTCCCCTATCAAGTCGCCCTCACGGCCATCTTCGTCGAAGGCTTCA TCTTCCTCTTCCTCGCCCTCATCGGCATGCGGCAGTGGCTCGCTCGGGCCATCCCCCACTCCATCAAGGTGGCGA CGGGCGTCGGCATCGGCCTCTTCCTAGCTCTCATCGGCCTGACCTACAGCGAGGGCATCGGACTCGTCCTCGGCG CCACGACGACGCCTACCCAGCTCGCTGGCTGCTCACCCTCGCAGCTGCGGGAGGGCGCGTGTCCTGGCGCGGAGA AGATGCGCAATCCGGCCATGTGGCTGGGCATCTTTGGAGGTGGCATCTTGACCGTGTTGCTGGCCATGTATCGTG TTCGTGGAGCCGTCATCGTCGGCATCATCCTCGTTAGCCTCGTCTCCTGGCCGAGGGATACGCTTGTCACCGCCT TTCCGCGTACGGAGCTGGGCGACAGCGCATTCGACTTCTTCCGTCACGTCGTCAGCTTTCATCCTATCCGCCGCA TACTCCATGTTCAGCGCTGGGACGTAGCCGAGTACGGTGCTCAGTTCGGCCTCGCCCTCGTCACCTTTCTCTACG TCGATATCCTCGACTGCACGGGCACGCTGTACGGCATGGCTCGCTTCGCTGGCCTCCTCGATCCTGTGACGCACG ACTTCGAGGGCTCGTCGGTTGCCTACGTCGTCGACGCGCTCAGCATCTCCGTCGGCGCCGTCTTCGGCCTTCCCC CCGTCACGGCCTTTGTCGAGTCCGGCGCCGGCATCTCCGAGGGTGGAAAGACGGGCTTGACAGCCGTCGTGACGG GGCTATGCTTCCTCGTTGCCGTCTTCTTTGCCCCCATCTTCGCCTCTATCCCGCCCTGGGCCACCGGCTGCGTCC TCGTCCTGGTCGGCTCCATGATGGCCGCCTCCGTCATCGAGATCAACTGGAAGTACATGGGCGACGCTGTGCCCG CCTTTCTGGCCGTTGCCCTGATGCCTTTTACCTACTCCATCGCCAACGGTCTCATCGGCAGCATCGGCTGCTATG CCGTTCTCAACACCGTCGTCTGGCTGCTCAAAGTCGTCTCGCGCGGCCGCATCGTGCCCCCCAACTACGCCGACA AGGAGCCCTGGACCTGGCGCATCCCCGGCGGCGTCTTCCCGCCCTGGATCGTCCGCCTTGCCAGGGGCGACAAGC GCTTCTGGCGCCGAGACGCGCCGTCGCCTAACCAAGATTCTCTGTGCCGTCAGCGAAAGCTCAGTTCCGAGCCGG GCGCCGACCGGAGCTCCTCTGCGGAGACAAGCTCGGTCAGGGGCTCGGAAAGCAGGGCCAACGACCGTTAG |