© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5609 |
| Gene name | |
| Location | scaffold_463:7492..9410 |
| Strand | + |
| Gene length (bp) | 1918 |
| Transcript length (bp) | 1494 |
| Coding sequence length (bp) | 1491 |
| Protein length (aa) | 497 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 2.4E-25 | 67 | 202 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 50 | 491 | 6.0E-63 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 52 | 491 | 5.0E-27 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 59 | 229 | 6.0E-19 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 65 | 259 | 3.0E-14 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 55 | 291 | 4.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 50 | 491 | 6.0E-63 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 52 | 491 | 5.0E-27 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 59 | 229 | 6.0E-19 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 65 | 259 | 3.0E-14 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 55 | 291 | 4.0E-11 |
| sp|Q8GTB6|THCAS_CANSA | Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 | 2 | 289 | 4.0E-11 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 60 | 248 | 1.0E-09 |
| sp|Q9FZC4|FOX1_ARATH | Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 | 69 | 261 | 2.0E-09 |
| sp|A6P6W0|CASL1_CANSA | Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 | 2 | 260 | 2.0E-09 |
| sp|Q33DQ2|THCAI_CANSA | Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 | 2 | 260 | 2.0E-09 |
| sp|A6P6W1|CASL2_CANSA | Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 | 2 | 260 | 1.0E-08 |
| sp|Q6BZA0|ALO_DEBHA | D-arabinono-1,4-lactone oxidase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ALO1 PE=3 SV=2 | 55 | 233 | 1.0E-08 |
| sp|Q9FZC7|FOX4_ARATH | Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 | 69 | 266 | 4.0E-08 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 58 | 237 | 6.0E-08 |
| sp|Q9LY71|CKX6_ARATH | Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 | 67 | 248 | 7.0E-08 |
| sp|P46377|FAS5_RHOFA | Uncharacterized oxidoreductase ORF5 in fasciation locus OS=Rhodococcus fascians GN=fas5 PE=2 SV=1 | 74 | 224 | 1.0E-07 |
| sp|O22213|CKX1_ARATH | Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 | 67 | 248 | 1.0E-07 |
| sp|P30986|RETO_ESCCA | Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1 | 4 | 267 | 1.0E-07 |
| sp|Q9FUJ1|CKX7_ARATH | Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 | 61 | 281 | 2.0E-07 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 65 | 252 | 3.0E-07 |
| sp|Q9FUJ2|CKX4_ARATH | Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana GN=CKX4 PE=1 SV=2 | 45 | 248 | 3.0E-07 |
| sp|Q6YW50|CKX7_ORYSJ | Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 | 67 | 250 | 3.0E-07 |
| sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 50 | 288 | 4.0E-07 |
| sp|Q5Z620|CKX10_ORYSJ | Cytokinin dehydrogenase 10 OS=Oryza sativa subsp. japonica GN=CKX10 PE=3 SV=1 | 67 | 278 | 6.0E-07 |
| sp|Q67YU0|CKX5_ARATH | Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 | 61 | 242 | 6.0E-07 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 69 | 261 | 1.0E-06 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 67 | 244 | 3.0E-06 |
| sp|Q9FZC8|FOX5_ARATH | Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 | 69 | 261 | 4.0E-06 |
| sp|Q6YW51|CKX6_ORYSJ | Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 | 67 | 250 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 3.63 | 0.93 | 6.33 |
| CcL | In ants, during behavior modification | 36.20 | 17.53 | 54.87 |
| CcD | In ants, recently dead | 109.60 | 55.25 | 163.94 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.000286 | yes |
| CcL | CcD | 0.000286 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5609 MLWFLNLLLFFGLALCALPRDHETYLAAAEKACRTALGLLGPKQVKTRPLNQTIVEQNWSLTCVTEPHCIVLPRD AADVAVVMRVIKLNDVVFAVRAAGNSPNPGWSSIDKRGILIDLQRLNQVSVSGDAQRVRVGAGARWGEVMAAANN HHVSVVGTRVSSLSVGGSILGGGYFFVPGYGLAADNVRSVEVVLADGHIVNASCTENKQLLWAIKGGGANFGIVT KFELDTIPIDKIWYEVLALAKDQALDALDALAKWQLQEGSLDTKGNIVFSVSLDAVLLAFIYTEPQVSRPKCFAP FYNLSPARTIVPATNGTFSSLYIIADSTLPKQVMRHDYRGASSLVDAQLYKDVYKFWEAKASTVFNNTGARQTFV MQHVPAFMADYGVVRTGNPLGIPRRTHQWWTTLVDWTRAEDDSEARSVCIETADYWERLSKERRLGVPFLFMNDA GRDQNPIATYGADNFKKLREVSLKYDSTQVFQRLQNDGFLLQKSVAL |
| Coding | >Ophio5|5609 ATGTTGTGGTTTCTAAATCTCCTTCTCTTCTTCGGGCTGGCGCTGTGTGCCTTGCCAAGAGACCATGAAACCTAC CTGGCGGCTGCTGAAAAAGCCTGTCGTACAGCGCTGGGACTCCTGGGACCGAAGCAAGTGAAGACACGGCCCCTG AACCAGACGATTGTCGAGCAAAACTGGTCCTTGACATGTGTGACGGAACCGCACTGCATTGTTCTCCCCCGCGAC GCAGCGGACGTTGCCGTAGTCATGCGAGTCATCAAGTTAAACGATGTCGTCTTCGCCGTCCGCGCCGCCGGCAAC TCGCCCAACCCGGGCTGGTCAAGCATCGATAAACGAGGCATTCTGATAGACTTGCAGCGTCTGAATCAGGTTTCC GTCTCTGGAGATGCTCAGCGCGTCCGTGTCGGTGCTGGCGCGCGATGGGGCGAGGTCATGGCCGCCGCCAACAAC CATCACGTGTCTGTCGTCGGAACACGCGTCTCCAGCTTGAGTGTTGGAGGGAGCATCCTTGGAGGAGGATACTTT TTCGTGCCCGGATACGGCCTGGCAGCAGACAATGTGAGAAGCGTCGAGGTCGTTCTTGCGGACGGGCACATTGTA AACGCCAGCTGTACAGAAAACAAGCAGCTCCTTTGGGCCATCAAGGGAGGCGGTGCGAACTTTGGCATTGTCACG AAATTCGAGCTCGACACCATTCCCATTGATAAGATATGGTATGAGGTCTTGGCCTTGGCCAAAGATCAGGCCCTC GACGCCCTCGACGCCCTCGCCAAGTGGCAGCTCCAAGAAGGCTCCCTCGACACCAAGGGAAACATTGTCTTTTCC GTCAGCCTAGACGCCGTACTGCTGGCCTTCATCTACACAGAGCCACAGGTATCGCGACCAAAGTGTTTCGCTCCA TTCTACAACCTGTCGCCAGCCAGAACCATCGTCCCAGCCACCAACGGGACTTTCAGTTCTCTTTACATTATCGCC GATTCGACGCTGCCGAAGCAAGTAATGCGCCATGATTACAGAGGTGCCAGCTCGCTGGTCGACGCGCAGCTCTAC AAAGACGTATACAAGTTCTGGGAGGCGAAAGCCTCTACCGTCTTTAACAACACGGGAGCCCGTCAAACCTTTGTC ATGCAACATGTTCCCGCCTTCATGGCCGATTACGGGGTCGTCAGGACGGGCAACCCATTGGGGATTCCACGTCGG ACGCATCAATGGTGGACGACGCTCGTTGACTGGACCCGCGCAGAAGACGACAGCGAAGCTCGGTCTGTTTGCATC GAAACGGCCGATTACTGGGAGCGACTTTCGAAAGAGCGTCGTCTGGGCGTCCCTTTCCTCTTCATGAACGATGCC GGGCGAGATCAAAACCCGATTGCCACGTACGGAGCCGATAATTTTAAGAAGCTGCGAGAGGTTTCGTTAAAGTAT GATTCAACCCAGGTTTTCCAGCGTTTGCAAAACGATGGTTTCTTGTTGCAGAAGTCAGTTGCTTTG |
| Transcript | >Ophio5|5609 ATGTTGTGGTTTCTAAATCTCCTTCTCTTCTTCGGGCTGGCGCTGTGTGCCTTGCCAAGAGACCATGAAACCTAC CTGGCGGCTGCTGAAAAAGCCTGTCGTACAGCGCTGGGACTCCTGGGACCGAAGCAAGTGAAGACACGGCCCCTG AACCAGACGATTGTCGAGCAAAACTGGTCCTTGACATGTGTGACGGAACCGCACTGCATTGTTCTCCCCCGCGAC GCAGCGGACGTTGCCGTAGTCATGCGAGTCATCAAGTTAAACGATGTCGTCTTCGCCGTCCGCGCCGCCGGCAAC TCGCCCAACCCGGGCTGGTCAAGCATCGATAAACGAGGCATTCTGATAGACTTGCAGCGTCTGAATCAGGTTTCC GTCTCTGGAGATGCTCAGCGCGTCCGTGTCGGTGCTGGCGCGCGATGGGGCGAGGTCATGGCCGCCGCCAACAAC CATCACGTGTCTGTCGTCGGAACACGCGTCTCCAGCTTGAGTGTTGGAGGGAGCATCCTTGGAGGAGGATACTTT TTCGTGCCCGGATACGGCCTGGCAGCAGACAATGTGAGAAGCGTCGAGGTCGTTCTTGCGGACGGGCACATTGTA AACGCCAGCTGTACAGAAAACAAGCAGCTCCTTTGGGCCATCAAGGGAGGCGGTGCGAACTTTGGCATTGTCACG AAATTCGAGCTCGACACCATTCCCATTGATAAGATATGGTATGAGGTCTTGGCCTTGGCCAAAGATCAGGCCCTC GACGCCCTCGACGCCCTCGCCAAGTGGCAGCTCCAAGAAGGCTCCCTCGACACCAAGGGAAACATTGTCTTTTCC GTCAGCCTAGACGCCGTACTGCTGGCCTTCATCTACACAGAGCCACAGGTATCGCGACCAAAGTGTTTCGCTCCA TTCTACAACCTGTCGCCAGCCAGAACCATCGTCCCAGCCACCAACGGGACTTTCAGTTCTCTTTACATTATCGCC GATTCGACGCTGCCGAAGCAAGTAATGCGCCATGATTACAGAGGTGCCAGCTCGCTGGTCGACGCGCAGCTCTAC AAAGACGTATACAAGTTCTGGGAGGCGAAAGCCTCTACCGTCTTTAACAACACGGGAGCCCGTCAAACCTTTGTC ATGCAACATGTTCCCGCCTTCATGGCCGATTACGGGGTCGTCAGGACGGGCAACCCATTGGGGATTCCACGTCGG ACGCATCAATGGTGGACGACGCTCGTTGACTGGACCCGCGCAGAAGACGACAGCGAAGCTCGGTCTGTTTGCATC GAAACGGCCGATTACTGGGAGCGACTTTCGAAAGAGCGTCGTCTGGGCGTCCCTTTCCTCTTCATGAACGATGCC GGGCGAGATCAAAACCCGATTGCCACGTACGGAGCCGATAATTTTAAGAAGCTGCGAGAGGTTTCGTTAAAGTAT GATTCAACCCAGGTTTTCCAGCGTTTGCAAAACGATGGTTTCTTGTTGCAGAAGTCAGTTGCTTTGTAG |
| Gene | >Ophio5|5609 ATGTTGTGGTTTCTAAATCTCCTTCTCTTCTTCGGGCTGGCGCTGTGTGCCTTGTGAGTCTTCTATCCCCATTCT TTTTCACACCGACTCGAATTTCTCACCAGTTGGCCAAGCAAACAAGGCCAAGAGACCATGAAACCTACCTGGCGG CTGCTGAAAAAGCCTGTCGTACAGCGCTGGGACTCCTGGGACCGAAGCAAGTGAAGACACGGCCCCTGAACCAGA CGATTGTCGAGCAAAACTGGCAAGCCAACCTTTCCCCAAAGCAGCCCTTGAAAGACGGCTGAGCAAACTCGGACA GGTCCTTGACATGTGTGACGGAACCGCACTGCATTGTTCTCCCCCGCGACGCAGCGGACGTTGCCGTAGTCATGC GAGTCATCAAGTTAAACGATGTCGTCTTCGCCGTCCGCGCCGCCGGCAACTCGCCCAACCCGGGCTGGTCAAGCA TCGATAAACGAGGCATTCTGATAGACTTGCAGCGTCTGAATCAGGTTTCCGTCTCTGGAGATGCTCAGCGCGTCC GTGTCGGTGCTGGCGCGCGATGGGGCGAGGTCATGGCCGCCGCCAACAACCATCACGTGTCTGTCGTCGGAACAC GCGTCTCCAGCTTGAGTGTTGGAGGGAGCATCCTTGGAGGTACGCAGTTGCTTCCAAGACTCATCGAAAGCTCTG CTTTGAGCGTCTTTGACGATGACGAAAGAGATGGAAACAAAGACTGATCGACTCGTTCTTGACTCGTACTAGGAG GATACTTTTTCGTGCCCGGATACGGCCTGGCAGCAGACAATGTGAGAAGCGTCGAGGTAAGAGTGAAAAGAGCCC TGACGTGTTCCCCTTTTCTATTTCCCATACTTGCTGACCCGATGGCAGGTCGTTCTTGCGGACGGGCACATTGTA AACGCCAGCTGTACAGAAAACAAGCAGCTCCTTTGGGCCATCAAGGGAGGCGGTGCGAACTTTGGCATTGTCACG AAATTCGAGCTCGACACCATTCCCATTGATAAGATATGGTATGAGGTCTTGGCCTTGGCCAAAGATCAGGCCCTC GACGCCCTCGACGCCCTCGCCAAGTGGCAGCTCCAAGAAGGCTCCCTCGACACCAAGGGAAACATTGTCTTTTCC GTCAGCCTAGACGCCGTACTGCTGGCCTTCATCTACACAGAGCCACAGGTATCGCGACCAAAGTGTTTCGCTCCA TTCTACAACCTGTCGCCAGCCAGAACCATCGTCCCAGCCACCAACGGGACTTTCAGTTCTCTTTACATTATCGCC GATTCGACGCTGCCGAAGCAAGTAATGCGGTAGGGGGGGTCACAATTCCAGCTTCCTTGTGCTACTGTGTATGTC AACGTCTGACCAGTCTCTTCCAGCCATGATTACAGAGGTGCCAGCTCGCTGGTCGACGCGCAGCTCTACAAAGAC GTATACAAGTTCTGGGAGGCGAAAGCCTCTACCGTCTTTAACAACACGGGAGCCCGTCAAACCTTTGTCATGCAA CATGTTCCCGCCTTCATGGCCGATTACGGGGTCGTCAGGACGGGCAACCCATTGGGGATTCCACGTCGGACGCAT CAATGTGAACCTCTCATCACCCTATCTCGCTGATACCTTGTCGATGCTGATTGTGACAGGGTGGACGACGCTCGT TGACTGGACCCGCGCAGAAGACGACAGCGAAGCTCGGTCTGTTTGCATCGAAACGGCCGATTACTGGGAGCGACT TTCGAAAGAGCGTCGTCTGGGCGTCCCTTTCCTCTTCATGAACGATGCCGGGCGAGATCAAAACCCGATTGCCAC GTACGGAGCCGATAATTTTAAGAAGCTGCGAGAGGTTTCGTTAAAGTATGATTCAACCCAGGTTTTCCAGCGTTT GCAAAACGATGGTTTCTTGTTGCAGAAGTCAGTTGCTTTGTAG |