© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5577 |
| Gene name | |
| Location | scaffold_46:40555..41618 |
| Strand | + |
| Gene length (bp) | 1063 |
| Transcript length (bp) | 936 |
| Coding sequence length (bp) | 933 |
| Protein length (aa) | 311 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00397 | WW | WW domain | 8.9E-10 | 18 | 48 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 251 | 273 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5577 MADYTPPSGPPPPKAPEVPAGWVARWNDQYKEWFYVNVYTKKSQWEKPTAPVLPAGENAPDEPPPGYEPGSGPAP TDIKKNPYEDHHANPAAPHHAGPSEDEDAKLAAKLQAEEDARARYASPGASSYAGAPGGAHSQQDQFPQDLPPRD RDRAKGGFLGKLFGKAKASAGGGYGGYSPQPQPHGFYQSPPPQLPQQGYGGYGPMGGYGQPQAGYGQGSYGGGYG GYPPQQGYGPPQTQAPAKRPGMGGMGMGLAGGAALGMGAGMLGGGLLAHEMHERDEAYEEGYQDAQDNDFGGGGD FDGGDFGGGDF |
| Coding | >Ophio5|5577 ATGGCCGACTACACTCCCCCGTCGGGCCCGCCGCCGCCCAAGGCGCCCGAGGTGCCGGCTGGATGGGTGGCGCGC TGGAACGACCAGTACAAAGAATGGTTCTACGTCAACGTCTACACCAAAAAGTCGCAGTGGGAGAAGCCCACGGCT CCCGTCCTCCCGGCCGGCGAAAACGCGCCCGATGAGCCGCCTCCAGGGTACGAGCCCGGCAGCGGGCCAGCCCCG ACCGACATCAAGAAGAACCCGTACGAGGATCATCACGCCAACCCGGCTGCCCCCCACCACGCTGGCCCTTCCGAG GACGAAGACGCGAAGCTCGCTGCCAAGCTGCAGGCCGAGGAGGACGCTAGGGCCCGGTATGCCAGCCCCGGCGCC AGCTCGTATGCCGGTGCCCCGGGTGGTGCACACAGCCAGCAGGATCAGTTCCCCCAAGACCTGCCACCGCGCGAT CGTGACCGGGCCAAGGGCGGCTTCCTGGGAAAGCTCTTTGGCAAGGCAAAGGCCTCTGCCGGCGGCGGTTACGGC GGTTATAGCCCGCAGCCGCAGCCGCACGGCTTCTACCAGTCTCCGCCCCCGCAGCTGCCGCAGCAAGGGTACGGC GGATACGGCCCGATGGGAGGTTATGGTCAACCGCAAGCGGGCTACGGCCAGGGAAGCTACGGCGGCGGCTATGGC GGATATCCCCCGCAGCAGGGGTACGGGCCGCCGCAGACGCAGGCGCCGGCCAAGAGGCCCGGCATGGGCGGCATG GGCATGGGTCTTGCGGGCGGTGCTGCGCTGGGCATGGGCGCGGGAATGTTGGGTGGAGGTCTCCTTGCTCATGAG ATGCATGAGCGTGATGAGGCATACGAAGAAGGATACCAGGATGCTCAAGACAACGACTTTGGAGGTGGCGGCGAC TTTGACGGCGGCGATTTTGGCGGCGGCGATTTC |
| Transcript | >Ophio5|5577 ATGGCCGACTACACTCCCCCGTCGGGCCCGCCGCCGCCCAAGGCGCCCGAGGTGCCGGCTGGATGGGTGGCGCGC TGGAACGACCAGTACAAAGAATGGTTCTACGTCAACGTCTACACCAAAAAGTCGCAGTGGGAGAAGCCCACGGCT CCCGTCCTCCCGGCCGGCGAAAACGCGCCCGATGAGCCGCCTCCAGGGTACGAGCCCGGCAGCGGGCCAGCCCCG ACCGACATCAAGAAGAACCCGTACGAGGATCATCACGCCAACCCGGCTGCCCCCCACCACGCTGGCCCTTCCGAG GACGAAGACGCGAAGCTCGCTGCCAAGCTGCAGGCCGAGGAGGACGCTAGGGCCCGGTATGCCAGCCCCGGCGCC AGCTCGTATGCCGGTGCCCCGGGTGGTGCACACAGCCAGCAGGATCAGTTCCCCCAAGACCTGCCACCGCGCGAT CGTGACCGGGCCAAGGGCGGCTTCCTGGGAAAGCTCTTTGGCAAGGCAAAGGCCTCTGCCGGCGGCGGTTACGGC GGTTATAGCCCGCAGCCGCAGCCGCACGGCTTCTACCAGTCTCCGCCCCCGCAGCTGCCGCAGCAAGGGTACGGC GGATACGGCCCGATGGGAGGTTATGGTCAACCGCAAGCGGGCTACGGCCAGGGAAGCTACGGCGGCGGCTATGGC GGATATCCCCCGCAGCAGGGGTACGGGCCGCCGCAGACGCAGGCGCCGGCCAAGAGGCCCGGCATGGGCGGCATG GGCATGGGTCTTGCGGGCGGTGCTGCGCTGGGCATGGGCGCGGGAATGTTGGGTGGAGGTCTCCTTGCTCATGAG ATGCATGAGCGTGATGAGGCATACGAAGAAGGATACCAGGATGCTCAAGACAACGACTTTGGAGGTGGCGGCGAC TTTGACGGCGGCGATTTTGGCGGCGGCGATTTCTAG |
| Gene | >Ophio5|5577 ATGGCCGACTACACTCCCCCGTCGGGCCCGCCGCCGCCCAAGGCGCCCGAGGTGCCGGCTGGATGGGTGGCGCGC TGGAACGACCAGTACAAAGAATGGTGCGTGCTCTCGTCTAATACCCTTCCCCCCCCCATGTCCTTCTCCCTGACG CGCTCGCAGGTTCTACGTCAACGTCTACACCAAAAAGTCGCAGTGGGAGAAGCCCACGGCTCCCGTCCTCCCGGC CGGCGAAAACGCGCCCGATGAGCCGCCTCCAGGGTACGAGCCCGGCAGCGGGCCAGCCCCGACCGACATCAAGAA GAACCCGTACGAGGATCATCACGCCAACCCGGCTGCCCCCCACCACGCTGGCCCTTCCGAGGACGAAGACGCGAA GCTCGCTGCCAAGCTGCAGGCCGAGGAGGACGCTAGGGCCCGGTATGCCAGCCCCGGCGCCAGCTCGTATGCCGG TGCCCCGGGTGGTGCACACAGCCAGCAGGATCAGTTCCCCCAAGACCTGCCACCGCGCGATCGTGACCGGGCCAA GGGCGGCTTCCTGGGAAAGCTCTTTGGCAAGGCAAAGGCCTCTGCCGGCGGCGGTTACGGCGGTTATAGCCCGCA GCCGCAGCCGCACGGCTTCTACCAGTCTCCGCCCCCGCAGCTGCCGCAGCAAGGGTACGGCGGATACGGCCCGAT GGGAGGTTATGGTCAACCGCAAGCGGGCTACGGCCAGGGAAGCTACGGCGGCGGCTATGGCGGATATCCCCCGCA GCAGGGGTACGGGCCGCCGCAGACGCAGGCGCCGGCCAAGAGGCCCGGCATGGGCGGCATGGGCATGGGTCTTGC GGGCGGTGCTGCGCTGGGCATGGGCGCGGGAATGTTGGGTGGAGGTCTCCTTGCTCATGAGATGCATGAGCGTGA TGAGGCATACGAAGAAGGATACCGTGAGTCGTTCTCCAAGGCGGTTGACGTTTGCGCTTGACGCTTTTCCATACT GACTCGCGCTGCAGAGGATGCTCAAGACAACGACTTTGGAGGTGGCGGCGACTTTGACGGCGGCGATTTTGGCGG CGGCGATTTCTAG |