Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5559
Gene name
Locationscaffold_46:69..2708
Strand-
Gene length (bp)2639
Transcript length (bp)1485
Coding sequence length (bp)1482
Protein length (aa) 494

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13695|YEN1_SCHPO Uncharacterized serine-rich protein C11G7.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11G7.01 PE=4 SV=1 265 363 3.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 265 287 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5559
MVTSAKILWLQQSLRQIRNDFHIFLVHRPSLSTTVSHRLSQPSISIPHPSFLFAPRPSADERYAVRSRFFLLVPA
VSFDVCLTGQEAFSSCLVEHVGPDEPGADDIGGREPLDRGDGRPADDQQPLPASLPSTSAAPPPASSSPSSSSSS
TEQRPASVPSSSSSPPQRAVSTPSSVPPQSSAPPAAAPSSSSSSQQPDVSSAVVTVTPSNVATSVQVVTSTTTRA
PVGGPSTTSSAASSSTSSAAAELDSSNSASGGGLNQASKVAIGVVVPIAAIAFLAIVGLFWWKKRRARQEAEEER
RKEVEDYSYNPNADPTMPAVGHSVEHAYEMKDEGGYRGWGSTATTTGSRGRKASTTMSGGAAGTYSDPASPIRAN
LSEARSGEPLVDGSSTHEGEILGAMGPSAANNRGGDVRRGPSNASSSYSAAARSDGSDGAMYGNGAAYYEQYGQN
PYSEQRPQEAGSQAVIRDNPARRNTRIENSAHYPQQSAGIAQNF
Coding >Ophio5|5559
ATGGTGACCTCGGCAAAGATTCTGTGGCTTCAGCAGAGCCTCCGGCAAATACGCAACGATTTTCATATTTTTCTC
GTCCACCGCCCGTCACTCTCGACGACTGTTTCTCATAGACTCAGCCAGCCATCCATTTCCATTCCTCACCCTTCA
TTCCTCTTCGCGCCCCGCCCGTCGGCGGACGAGCGATACGCCGTTCGGTCACGTTTCTTTCTTCTTGTTCCGGCC
GTCTCGTTCGACGTCTGCTTGACAGGACAAGAGGCCTTCTCGTCTTGCCTCGTTGAACATGTCGGGCCGGACGAG
CCAGGCGCCGACGACATCGGCGGCCGAGAGCCCCTCGACCGCGGCGACGGCCGCCCAGCCGACGACCAGCAGCCG
CTGCCCGCCAGTCTCCCCAGCACGTCGGCCGCTCCTCCACCCGCCAGCTCCTCGCCGTCGTCCAGCTCCTCGTCC
ACGGAGCAGCGTCCGGCTTCGGTGCCATCGTCTAGCTCCTCGCCGCCCCAACGTGCCGTGTCGACGCCGAGCTCA
GTGCCGCCACAGTCTTCAGCACCTCCCGCCGCCGCCCCTTCCTCCTCGTCCTCCTCGCAGCAGCCCGACGTCTCT
TCGGCCGTCGTCACCGTCACTCCGAGCAATGTGGCCACTAGCGTCCAGGTGGTGACATCGACGACGACCCGGGCG
CCCGTAGGAGGCCCGTCGACGACATCGTCGGCCGCTTCATCGTCGACGTCGTCGGCCGCCGCCGAACTCGACTCG
TCCAACTCGGCCTCTGGTGGCGGCCTGAACCAGGCGTCCAAGGTGGCCATCGGTGTTGTGGTGCCCATCGCCGCC
ATCGCCTTCCTGGCCATCGTCGGTCTCTTTTGGTGGAAGAAGCGGAGGGCGCGTCAGGAAGCCGAAGAGGAGCGC
CGGAAGGAGGTGGAGGACTACTCATACAACCCCAACGCCGACCCCACGATGCCTGCTGTCGGCCACTCGGTCGAG
CACGCGTACGAGATGAAAGACGAGGGCGGCTACCGCGGCTGGGGCTCCACCGCCACCACGACGGGCTCCAGAGGA
CGCAAGGCCTCGACGACAATGTCGGGAGGCGCCGCCGGCACCTACTCGGACCCGGCGTCGCCCATCCGCGCCAAC
CTATCCGAGGCGCGGTCCGGCGAGCCGCTCGTGGACGGCTCGTCGACGCACGAGGGCGAGATCCTCGGCGCCATG
GGGCCGTCGGCGGCCAACAACCGCGGTGGCGACGTGCGTCGAGGGCCGTCCAACGCCTCGTCTTCCTACAGCGCG
GCCGCCCGGTCTGATGGGTCCGACGGCGCCATGTACGGCAACGGCGCGGCCTATTACGAACAGTACGGCCAGAAC
CCGTACAGCGAGCAGAGGCCGCAGGAGGCGGGCAGCCAAGCCGTCATACGCGACAATCCGGCGAGACGCAATACC
CGGATCGAGAACTCGGCGCATTATCCGCAGCAGAGTGCGGGCATTGCTCAAAACTTT
Transcript >Ophio5|5559
ATGGTGACCTCGGCAAAGATTCTGTGGCTTCAGCAGAGCCTCCGGCAAATACGCAACGATTTTCATATTTTTCTC
GTCCACCGCCCGTCACTCTCGACGACTGTTTCTCATAGACTCAGCCAGCCATCCATTTCCATTCCTCACCCTTCA
TTCCTCTTCGCGCCCCGCCCGTCGGCGGACGAGCGATACGCCGTTCGGTCACGTTTCTTTCTTCTTGTTCCGGCC
GTCTCGTTCGACGTCTGCTTGACAGGACAAGAGGCCTTCTCGTCTTGCCTCGTTGAACATGTCGGGCCGGACGAG
CCAGGCGCCGACGACATCGGCGGCCGAGAGCCCCTCGACCGCGGCGACGGCCGCCCAGCCGACGACCAGCAGCCG
CTGCCCGCCAGTCTCCCCAGCACGTCGGCCGCTCCTCCACCCGCCAGCTCCTCGCCGTCGTCCAGCTCCTCGTCC
ACGGAGCAGCGTCCGGCTTCGGTGCCATCGTCTAGCTCCTCGCCGCCCCAACGTGCCGTGTCGACGCCGAGCTCA
GTGCCGCCACAGTCTTCAGCACCTCCCGCCGCCGCCCCTTCCTCCTCGTCCTCCTCGCAGCAGCCCGACGTCTCT
TCGGCCGTCGTCACCGTCACTCCGAGCAATGTGGCCACTAGCGTCCAGGTGGTGACATCGACGACGACCCGGGCG
CCCGTAGGAGGCCCGTCGACGACATCGTCGGCCGCTTCATCGTCGACGTCGTCGGCCGCCGCCGAACTCGACTCG
TCCAACTCGGCCTCTGGTGGCGGCCTGAACCAGGCGTCCAAGGTGGCCATCGGTGTTGTGGTGCCCATCGCCGCC
ATCGCCTTCCTGGCCATCGTCGGTCTCTTTTGGTGGAAGAAGCGGAGGGCGCGTCAGGAAGCCGAAGAGGAGCGC
CGGAAGGAGGTGGAGGACTACTCATACAACCCCAACGCCGACCCCACGATGCCTGCTGTCGGCCACTCGGTCGAG
CACGCGTACGAGATGAAAGACGAGGGCGGCTACCGCGGCTGGGGCTCCACCGCCACCACGACGGGCTCCAGAGGA
CGCAAGGCCTCGACGACAATGTCGGGAGGCGCCGCCGGCACCTACTCGGACCCGGCGTCGCCCATCCGCGCCAAC
CTATCCGAGGCGCGGTCCGGCGAGCCGCTCGTGGACGGCTCGTCGACGCACGAGGGCGAGATCCTCGGCGCCATG
GGGCCGTCGGCGGCCAACAACCGCGGTGGCGACGTGCGTCGAGGGCCGTCCAACGCCTCGTCTTCCTACAGCGCG
GCCGCCCGGTCTGATGGGTCCGACGGCGCCATGTACGGCAACGGCGCGGCCTATTACGAACAGTACGGCCAGAAC
CCGTACAGCGAGCAGAGGCCGCAGGAGGCGGGCAGCCAAGCCGTCATACGCGACAATCCGGCGAGACGCAATACC
CGGATCGAGAACTCGGCGCATTATCCGCAGCAGAGTGCGGGCATTGCTCAAAACTTTTGA
Gene >Ophio5|5559
ATGGTGACCTCGGCAAGTATGTAGGTACCGGCATCAGCTTCGGGGTTCAGGGCCTCTGCTAACGGCAGCAAGTAC
CTCATGGCGCGCCGATACCTGCGTGGTGGCCCAGAGCTTTGCGGAGAAGAGGCCTCCATGTGACCGGTTCCGATA
CCTCGTACGAGAGGGGAACGCTACCGCCCTACCGCCGTCCCCGGACGGGCTGGAGGTTGCACGCTACTTGCTGCC
TACCTAGGCAGGACCTGACCGAGTTAGGCAGGCCGGACCTTGGCGCAGATACGAATATCCGTTCTTTCGCGCCCT
CTCTCGTACCAGTCTGCAGCGTCGAGATCGAACCGTCACCCCGTGTGTGTGTGTGTGTGTGTGTTTTTTTCCTGC
TGCACTTTCTTTCCTTCTTCTCTCTTCTCTTCCATCTTCTCCGTTCATACCGGGAGGGGGAGGGGATTCTGTTTC
TCTTTTTTTCCCCCCCTTTTCCTCTTCTCTTATCGGCCTCTTGCTCGGTCTGCGACGGCTTGTCCGTGGCGCTAT
CGCCAGCCTCGACTGCTGCGTCTCAGACTGAACATTTCGTCTTTCCTTTGCCTGCCTCCCTGCCCCCTCTCGAAG
GAGGACAAAAAAAAAAAAAAGAGATTCTGTGGCTTCAGCAGAGCCTCCGGCAAATACGCAACGATTTTCATATTT
TTCTCGTGTATGATTTTCTTGCCCGACAATTTTTTTTTTCATCATTATCCACCCTCACGGCATCTCTTTTCCCTG
CCCCATCTTTTCCTTTGTTTATTTTCGCCTCGTCCTCTTCCTCTCTCTTGGCAGATCCATCCTCTGTCGTTTTCT
CCCCCCCTCTCTCTTCCACTCTTTCGCTGACCCTTACCAGCCACCGCCCGTCACTCTCGACGACTGTTTCTCATA
GACTCAGCCAGCCATCCATTTCCATTCCTCACCCTTCATTCCTCTTCGCGCCCCGCCCGTCGGCGGACGAGCGAT
ACGCCGTTCGGTCACGTTTCTTTCTTCTTGTTCCGGCCGTCTCGTTCGACGTCTGCTTGACAGGTATGTATATGA
CATGGGACTCTCTTCCTCTCGCTCGCCGCAAGCGTGGCATTGAGCATAGCTCTTGGCCACTCCCCAAAGTCACAG
TCCTGGCGTCTCGAAGTATCGTCGACAGACTGTCTGCTGCTCGTCCTCCTTCATGGCAGCGACACGGCGCTGGCG
GACCTTCCGCCGGCCCAGCGCCCATGGCCGTCCCGCGTCCGGACCCGGACCCGGACCCGGACCCGGGCCTCGCAC
ATGATATGAGCGGCGCTAACAGGAGTGAGCCATTCCAGGACAAGAGGCCTTCTCGTCTTGCCTCGTTGAACATGT
CGGGCCGGACGAGCCAGGCGCCGACGACATCGGCGGCCGAGAGCCCCTCGACCGCGGCGACGGCCGCCCAGCCGA
CGAGTGAAGAGGCTGCTGCCTCGCTTGCAGCCTCTTCCGCTGCTTCCCCTACCGCCTCACCATCGTCGCCATCCA
CAAACTCGCCGGCGCAAAGCCAGCAGCCGCTGCCCGCCAGTCTCCCCAGCACGTCGGCCGCTCCTCCACCCGCCA
GCTCCTCGCCGTCGTCCAGCTCCTCGTCCACGGAGCAGCGTCCGGCTTCGGTGCCATCGTCTAGCTCCTCGCCGC
CCCAACGTGCCGTGTCGACGCCGAGCTCAGTGCCGCCACAGTCTTCAGCACCTCCCGCCGCCGCCCCTTCCTCCT
CGTCCTCCTCGCAGCAGCCCGACGTCTCTTCGGCCGTCGTCACCGTCACTCCGAGCAATGTGGCCACTAGCGTCC
AGGTGGTGACATCGACGACGACCCGGGCGCCCGTAGGAGGCCCGTCGACGACATCGTCGGCCGCTTCATCGTCGA
CGTCGTCGGCCGCCGCCGAACTCGACTCGTCCAACTCGGCCTCTGGTGGCGGCCTGAACCAGGCGTCCAAGGTGG
CCATCGGTGTTGTGGTGCCCATCGCCGCCATCGCCTTCCTGGCCATCGTCGGTCTCTTTTGGTGGAAGAAGCGGA
GGGCGCGTCAGGAAGCCGAAGAGGAGCGCCGGAAGGAGGTGGAGGACTACTCATACAACCCCAACGCCGACCCCA
CGATGCCTGCTGTCGGCCACTCGGTCGAGCACGCGTACGAGATGAAAGACGAGGGCGGCTACCGCGGCTGGGGCT
CCACCGCCACCACGACGGGCTCCAGAGGACGCAAGGCCTCGACGACAATGTCGGGAGGCGCCGCCGGCACCTACT
CGGACCCGGCGTCGCCCATCCGCGCCAACCTATCCGAGGCGCGGTCCGGCGAGCCGCTCGTGGACGGCTCGTCGA
CGCACGAGGGCGAGATCCTCGGCGCCATGGGGCCGTCGGCGGCCAACAACCGCGGTGGCGACGTGCGTCGAGGGC
CGTCCAACGCCTCGTCTTCCTACAGCGCGGCCGCCCGGTCTGATGGGTCCGACGGCGCCATGTACGGCAACGGCG
CGGCCTATTACGAACAGTACGGCCAGAACCCGTACAGCGAGCAGAGGCCGCAGGAGGCGGGCAGCCAAGCCGTCA
TACGCGACAATCCGGCGAGACGCAATACCCGGATCGAGAACTCGGCGCATTATCCGCAGCAGAGTGCGGGCATTG
CTCAAAACTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail