Protein ID | Ophio5|5545 |
Gene name | |
Location | scaffold_457:725..2900 |
Strand | + |
Gene length (bp) | 2175 |
Transcript length (bp) | 2124 |
Coding sequence length (bp) | 2121 |
Protein length (aa) | 707 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03370 | CBM_21 | Carbohydrate/starch-binding module (family 21) | 1.3E-32 | 310 | 418 |
PF16760 | CBM53 | Starch/carbohydrate-binding module (family 53) | 2.2E-09 | 337 | 419 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5U2R5|PPR3C_RAT | Protein phosphatase 1 regulatory subunit 3C OS=Rattus norvegicus GN=Ppp1r3c PE=2 SV=1 | 321 | 418 | 3.0E-13 |
sp|Q9UQK1|PPR3C_HUMAN | Protein phosphatase 1 regulatory subunit 3C OS=Homo sapiens GN=PPP1R3C PE=1 SV=2 | 321 | 418 | 5.0E-13 |
sp|Q0VCR4|PPR3C_BOVIN | Protein phosphatase 1 regulatory subunit 3C OS=Bos taurus GN=PPP1R3C PE=2 SV=1 | 321 | 418 | 5.0E-13 |
sp|O95685|PPR3D_HUMAN | Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1 | 306 | 427 | 3.0E-11 |
sp|Q99MR9|PPR3A_MOUSE | Protein phosphatase 1 regulatory subunit 3A OS=Mus musculus GN=Ppp1r3a PE=1 SV=2 | 306 | 450 | 2.0E-10 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5U2R5|PPR3C_RAT | Protein phosphatase 1 regulatory subunit 3C OS=Rattus norvegicus GN=Ppp1r3c PE=2 SV=1 | 321 | 418 | 3.0E-13 |
sp|Q9UQK1|PPR3C_HUMAN | Protein phosphatase 1 regulatory subunit 3C OS=Homo sapiens GN=PPP1R3C PE=1 SV=2 | 321 | 418 | 5.0E-13 |
sp|Q0VCR4|PPR3C_BOVIN | Protein phosphatase 1 regulatory subunit 3C OS=Bos taurus GN=PPP1R3C PE=2 SV=1 | 321 | 418 | 5.0E-13 |
sp|O95685|PPR3D_HUMAN | Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1 | 306 | 427 | 3.0E-11 |
sp|Q99MR9|PPR3A_MOUSE | Protein phosphatase 1 regulatory subunit 3A OS=Mus musculus GN=Ppp1r3a PE=1 SV=2 | 306 | 450 | 2.0E-10 |
sp|Q8BRJ4|PPR3E_MOUSE | Protein phosphatase 1 regulatory subunit 3E OS=Mus musculus GN=Ppp1r3e PE=1 SV=2 | 327 | 418 | 9.0E-10 |
sp|Q6DDQ5|PPR3C_XENLA | Protein phosphatase 1 regulatory subunit 3C OS=Xenopus laevis GN=ppp1r3c PE=2 SV=1 | 305 | 418 | 2.0E-09 |
sp|Q6GQ68|PP3BB_XENLA | Protein phosphatase 1 regulatory subunit 3B-B OS=Xenopus laevis GN=ppp1r3b-b PE=2 SV=1 | 307 | 418 | 3.0E-09 |
sp|P40187|PIG2_YEAST | GSY2-interacting protein PIG2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIG2 PE=1 SV=1 | 312 | 419 | 3.0E-09 |
sp|Q7TMB3|PPR3C_MOUSE | Protein phosphatase 1 regulatory subunit 3C OS=Mus musculus GN=Ppp1r3c PE=1 SV=1 | 321 | 418 | 4.0E-09 |
sp|P40036|GIP2_YEAST | GLC7-interacting protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIP2 PE=1 SV=1 | 325 | 419 | 4.0E-09 |
sp|Q6P950|PR3CB_DANRE | Protein phosphatase 1 regulatory subunit 3C-B OS=Danio rerio GN=ppp1r3cb PE=2 SV=1 | 306 | 418 | 5.0E-09 |
sp|Q00756|PPR3A_RABIT | Protein phosphatase 1 regulatory subunit 3A OS=Oryctolagus cuniculus GN=PPP1R3A PE=1 SV=1 | 326 | 430 | 6.0E-09 |
sp|Q5BL87|PP3BA_XENLA | Protein phosphatase 1 regulatory subunit 3B-A OS=Xenopus laevis GN=ppp1r3b-a PE=2 SV=1 | 307 | 426 | 1.0E-08 |
sp|A6QNP3|PPR3B_BOVIN | Protein phosphatase 1 regulatory subunit 3B OS=Bos taurus GN=PPP1R3B PE=2 SV=1 | 307 | 418 | 1.0E-08 |
sp|Q86XI6|PPR3B_HUMAN | Protein phosphatase 1 regulatory subunit 3B OS=Homo sapiens GN=PPP1R3B PE=1 SV=1 | 320 | 418 | 2.0E-08 |
sp|Q8C767|PPR3B_MOUSE | Protein phosphatase 1 regulatory subunit 3B OS=Mus musculus GN=Ppp1r3b PE=1 SV=1 | 293 | 418 | 2.0E-08 |
sp|Q6IN01|PPR3B_RAT | Protein phosphatase 1 regulatory subunit 3B OS=Rattus norvegicus GN=Ppp1r3b PE=1 SV=1 | 293 | 418 | 2.0E-08 |
sp|Q16821|PPR3A_HUMAN | Protein phosphatase 1 regulatory subunit 3A OS=Homo sapiens GN=PPP1R3A PE=1 SV=3 | 326 | 423 | 3.0E-08 |
sp|P28006|GAC1_YEAST | Serine/threonine-protein phosphatase 1 regulatory subunit GAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAC1 PE=1 SV=2 | 320 | 422 | 4.0E-08 |
sp|Q9VVY3|GBS76_DROME | Glycogen-binding subunit 76A OS=Drosophila melanogaster GN=Gbs-76A PE=1 SV=1 | 221 | 416 | 4.0E-08 |
sp|Q803M0|PPR3B_DANRE | Protein phosphatase 1 regulatory subunit 3B OS=Danio rerio GN=ppp1r3b PE=2 SV=1 | 313 | 418 | 3.0E-07 |
sp|Q6GL23|PPR3C_XENTR | Protein phosphatase 1 regulatory subunit 3C OS=Xenopus tropicalis GN=ppp1r3c PE=2 SV=1 | 326 | 435 | 3.0E-07 |
sp|Q28E28|PPR3B_XENTR | Protein phosphatase 1 regulatory subunit 3B OS=Xenopus tropicalis GN=ppp1r3b PE=2 SV=1 | 307 | 424 | 2.0E-06 |
sp|P0C7L8|PPR3E_RAT | Protein phosphatase 1 regulatory subunit 3E OS=Rattus norvegicus GN=Ppp1r3e PE=2 SV=1 | 329 | 418 | 8.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:2001070 | starch binding | Yes |
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
GO:0030246 | carbohydrate binding | No |
GO:0030247 | polysaccharide binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 72.47 | 38.92 | 106.01 |
CcL | In ants, during behavior modification | 305.13 | 96.27 | 513.98 |
CcD | In ants, recently dead | 199.44 | 92.77 | 306.11 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000286 | yes |
SC16a | CcD | 0.000286 | yes |
CcL | CcD | 0.165229 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5545 MPYTPPSQLSPPSSASTSPLVSRRSSVQSGSQPALPRSASYLNKHRRTPSIQDGCAARGIETERATAANTVANSA ANSTSPVKPPLSSPRPDDQPPTSPVSSASCDDYQDAASQLDSYQSLRDAVSQISQPRNPSPPPAPTDPMGPTEPM RVSLSTTALDGLAAKCSRSTGHVRSATDSNAPTISADSSLTASDEDTDEDLKFKPPMLRKKSGELVRPALRPSSH RRPSSVPGTPIFSKAVHFDSHLEHVRHFLQVDRPLAVSAGSSPIDNHESDSEYPFPEVKSGVRSPPYEWELVTTN FPRQVRLRNTLPVRLERVWLSADHRSLLGSVCVANMAFHKHVTCRFTFDYWKTVSEVGAEYGHEIRPYDGPATHD RFNFSIRLSDVVNLESKTLYFCVRYSVSGQEFWDNNDSTNFQVDFKKKHLPQKGKNGLPGATSRSLNGLPRSNNR RSNSGSSLRPMSLPPSLDAFGHEAMGADIDFDQPIHEYLGESGPTTGLRLKNKSSTNLASDNIARNLTSPSGVAF SNRYDFGASLSAAMQAAKDSGRDKDTLYMRRNVRGAEAVKGKSQSESPLGASSSPSGTQSPNPSLPSASYEELVN KYCFFGSKQSSPMMTDGTMRGGAYDGSKAGYEPGEAKASPPEKRTAMHHSMHLEGATSYFPPLTVTTGARALAVG SGTPSSEMPFRGQPSDRYLWTTETQTATAILG |
Coding | >Ophio5|5545 ATGCCTTATACGCCCCCTTCGCAGCTATCTCCTCCGTCCTCGGCCTCGACGTCGCCCCTCGTGAGCCGTCGCTCG TCGGTCCAATCGGGCTCTCAACCCGCCCTCCCTCGGTCCGCCTCTTACCTCAACAAGCATCGTCGCACCCCCTCG ATACAAGATGGCTGTGCCGCCCGTGGCATCGAGACGGAGCGCGCCACGGCTGCCAACACGGTCGCAAACTCAGCC GCCAATTCGACCAGTCCCGTGAAGCCGCCGCTGAGTTCGCCCCGACCCGACGATCAACCCCCCACGTCACCCGTC TCGTCTGCCAGCTGCGACGACTACCAAGACGCTGCCAGCCAGCTTGACTCCTACCAGAGCCTGCGAGATGCCGTC AGCCAGATCTCTCAGCCCCGCAACCCGTCCCCTCCCCCCGCCCCGACGGATCCGATGGGGCCAACAGAGCCCATG AGGGTCAGCCTTAGCACGACGGCCCTCGACGGCCTGGCCGCTAAATGCTCACGCTCCACTGGCCATGTTCGATCC GCGACGGATTCCAACGCGCCCACCATTTCCGCCGACTCGTCTCTTACGGCCTCGGACGAGGATACCGACGAGGAC CTCAAGTTCAAGCCTCCGATGCTGCGCAAAAAGTCCGGCGAGCTCGTCCGGCCCGCACTTCGCCCATCGTCGCAT CGCCGTCCGTCCAGCGTCCCTGGCACGCCCATCTTTTCCAAGGCTGTTCATTTTGACTCTCACCTGGAGCACGTC CGCCACTTTCTTCAGGTTGACCGCCCCCTCGCCGTCAGTGCCGGCTCCTCGCCCATCGACAACCACGAGAGCGAC AGTGAATATCCCTTCCCCGAGGTCAAGTCGGGTGTCCGCTCGCCCCCCTACGAGTGGGAGCTCGTCACCACAAAC TTTCCCCGCCAAGTCCGCCTGCGTAATACGCTACCTGTCCGGCTCGAGAGGGTCTGGCTCTCGGCCGACCACAGA TCCCTACTCGGCTCCGTCTGCGTCGCCAACATGGCCTTCCACAAGCACGTCACCTGCCGCTTCACCTTTGACTAC TGGAAAACAGTGTCCGAGGTTGGCGCCGAGTACGGTCACGAAATTCGCCCCTACGACGGCCCCGCCACCCACGAT CGTTTTAACTTCTCCATTAGGCTCTCCGACGTGGTGAACCTCGAGTCCAAGACGCTCTACTTTTGCGTTCGTTAC TCTGTTAGCGGCCAGGAGTTTTGGGACAACAACGACTCCACCAACTTCCAGGTCGACTTCAAGAAAAAACACCTA CCGCAGAAGGGCAAGAACGGGCTCCCAGGCGCCACCTCGCGCTCCCTCAACGGCCTACCTAGAAGCAACAACCGC AGGTCAAACTCGGGCAGCTCGCTTCGGCCCATGTCCTTGCCGCCATCGCTCGACGCCTTCGGCCACGAAGCCATG GGCGCCGACATAGATTTTGATCAGCCCATTCACGAGTACCTCGGCGAGTCTGGGCCGACGACCGGTCTGCGCCTC AAGAACAAGTCGTCGACCAACCTTGCAAGCGACAACATCGCCCGCAACCTCACGTCGCCCAGTGGCGTTGCCTTT TCCAACCGTTATGACTTTGGCGCCTCGCTGAGTGCCGCCATGCAGGCCGCAAAGGATTCGGGCAGAGACAAGGAC ACGCTCTACATGAGGAGAAATGTTCGCGGAGCCGAGGCCGTCAAGGGCAAATCACAATCCGAGTCGCCGCTCGGC GCCTCGAGTTCGCCCAGCGGGACCCAGTCGCCGAACCCGAGCCTACCGAGCGCTTCATATGAGGAGCTCGTCAAC AAGTATTGCTTTTTTGGCTCCAAACAATCGAGTCCCATGATGACGGACGGAACAATGAGAGGCGGAGCCTACGAT GGGTCCAAGGCTGGCTACGAGCCGGGAGAGGCAAAAGCGTCACCCCCGGAAAAGCGGACGGCGATGCACCACTCG ATGCACCTCGAAGGCGCCACGTCATACTTTCCACCCCTCACCGTGACGACGGGTGCCAGGGCACTGGCAGTCGGC TCGGGCACGCCTTCGAGCGAAATGCCGTTTCGCGGCCAGCCGTCTGACCGGTACCTCTGGACGACGGAGACGCAG ACGGCGACAGCCATCTTGGGC |
Transcript | >Ophio5|5545 ATGCCTTATACGCCCCCTTCGCAGCTATCTCCTCCGTCCTCGGCCTCGACGTCGCCCCTCGTGAGCCGTCGCTCG TCGGTCCAATCGGGCTCTCAACCCGCCCTCCCTCGGTCCGCCTCTTACCTCAACAAGCATCGTCGCACCCCCTCG ATACAAGATGGCTGTGCCGCCCGTGGCATCGAGACGGAGCGCGCCACGGCTGCCAACACGGTCGCAAACTCAGCC GCCAATTCGACCAGTCCCGTGAAGCCGCCGCTGAGTTCGCCCCGACCCGACGATCAACCCCCCACGTCACCCGTC TCGTCTGCCAGCTGCGACGACTACCAAGACGCTGCCAGCCAGCTTGACTCCTACCAGAGCCTGCGAGATGCCGTC AGCCAGATCTCTCAGCCCCGCAACCCGTCCCCTCCCCCCGCCCCGACGGATCCGATGGGGCCAACAGAGCCCATG AGGGTCAGCCTTAGCACGACGGCCCTCGACGGCCTGGCCGCTAAATGCTCACGCTCCACTGGCCATGTTCGATCC GCGACGGATTCCAACGCGCCCACCATTTCCGCCGACTCGTCTCTTACGGCCTCGGACGAGGATACCGACGAGGAC CTCAAGTTCAAGCCTCCGATGCTGCGCAAAAAGTCCGGCGAGCTCGTCCGGCCCGCACTTCGCCCATCGTCGCAT CGCCGTCCGTCCAGCGTCCCTGGCACGCCCATCTTTTCCAAGGCTGTTCATTTTGACTCTCACCTGGAGCACGTC CGCCACTTTCTTCAGGTTGACCGCCCCCTCGCCGTCAGTGCCGGCTCCTCGCCCATCGACAACCACGAGAGCGAC AGTGAATATCCCTTCCCCGAGGTCAAGTCGGGTGTCCGCTCGCCCCCCTACGAGTGGGAGCTCGTCACCACAAAC TTTCCCCGCCAAGTCCGCCTGCGTAATACGCTACCTGTCCGGCTCGAGAGGGTCTGGCTCTCGGCCGACCACAGA TCCCTACTCGGCTCCGTCTGCGTCGCCAACATGGCCTTCCACAAGCACGTCACCTGCCGCTTCACCTTTGACTAC TGGAAAACAGTGTCCGAGGTTGGCGCCGAGTACGGTCACGAAATTCGCCCCTACGACGGCCCCGCCACCCACGAT CGTTTTAACTTCTCCATTAGGCTCTCCGACGTGGTGAACCTCGAGTCCAAGACGCTCTACTTTTGCGTTCGTTAC TCTGTTAGCGGCCAGGAGTTTTGGGACAACAACGACTCCACCAACTTCCAGGTCGACTTCAAGAAAAAACACCTA CCGCAGAAGGGCAAGAACGGGCTCCCAGGCGCCACCTCGCGCTCCCTCAACGGCCTACCTAGAAGCAACAACCGC AGGTCAAACTCGGGCAGCTCGCTTCGGCCCATGTCCTTGCCGCCATCGCTCGACGCCTTCGGCCACGAAGCCATG GGCGCCGACATAGATTTTGATCAGCCCATTCACGAGTACCTCGGCGAGTCTGGGCCGACGACCGGTCTGCGCCTC AAGAACAAGTCGTCGACCAACCTTGCAAGCGACAACATCGCCCGCAACCTCACGTCGCCCAGTGGCGTTGCCTTT TCCAACCGTTATGACTTTGGCGCCTCGCTGAGTGCCGCCATGCAGGCCGCAAAGGATTCGGGCAGAGACAAGGAC ACGCTCTACATGAGGAGAAATGTTCGCGGAGCCGAGGCCGTCAAGGGCAAATCACAATCCGAGTCGCCGCTCGGC GCCTCGAGTTCGCCCAGCGGGACCCAGTCGCCGAACCCGAGCCTACCGAGCGCTTCATATGAGGAGCTCGTCAAC AAGTATTGCTTTTTTGGCTCCAAACAATCGAGTCCCATGATGACGGACGGAACAATGAGAGGCGGAGCCTACGAT GGGTCCAAGGCTGGCTACGAGCCGGGAGAGGCAAAAGCGTCACCCCCGGAAAAGCGGACGGCGATGCACCACTCG ATGCACCTCGAAGGCGCCACGTCATACTTTCCACCCCTCACCGTGACGACGGGTGCCAGGGCACTGGCAGTCGGC TCGGGCACGCCTTCGAGCGAAATGCCGTTTCGCGGCCAGCCGTCTGACCGGTACCTCTGGACGACGGAGACGCAG ACGGCGACAGCCATCTTGGGCTAG |
Gene | >Ophio5|5545 ATGCCTTATACGCCCCCTTCGCAGCTATCTCCTCCGTCCTCGGCCTCGACGTCGCCCCTCGTGAGCCGTCGCTCG TCGGTCCAATCGGGCTCTCAACCCGCCCTCCCTCGGTCCGCCTCTTACCTCAACAAGCATCGTCGCACCCCCTCG ATACAAGATGGCTGTGCCGCCCGTGGCATCGAGACGGAGCGCGCCACGGCTGCCAACACGGTCGCAAACTCAGCC GCCAATTCGACCAGTCCCGTGAAGCCGCCGCTGAGTTCGCCCCGACCCGACGATCAACCCCCCACGTCACCCGTC TCGTCTGCCAGCTGCGACGACTACCAAGACGCTGCCAGCCAGCTTGACTCCTACCAGAGCCTGCGAGATGCCGTC AGCCAGATCTCTCAGCCCCGCAACCCGTCCCCTCCCCCCGCCCCGACGGATCCGATGGGGCCAACAGAGCCCATG AGGGTCAGCCTTAGCACGACGGCCCTCGACGGCCTGGCCGCTAAATGCTCACGCTCCACTGGCCATGTTCGATCC GCGACGGATTCCAACGCGCCCACCATTTCCGCCGACTCGTCTCTTACGGCCTCGGACGAGGATACCGACGAGGAC CTCAAGTTCAAGCCTCCGATGCTGCGCAAAAAGTCCGGCGAGCTCGTCCGGCCCGCACTTCGCCCATCGTCGCAT CGCCGTCCGTCCAGCGTCCCTGGCACGCCCATCTTTTCCAAGGCTGTTCATTTTGACTCTCACCTGGAGCACGTC CGCCACTTTCTTCAGGTTGACCGCCCCCTCGCCGTCAGTGCCGGCTCCTCGCCCATCGACAACCACGAGAGCGAC AGTGAATATCCCTTCCCCGAGGTCAAGTCGGGTGTCCGCTCGCCCCCCTACGAGTGGGAGCTCGTCACCACAAAC TTTCCCCGCCAAGTCCGCCTGCGTAATACGCTACCTGTCCGGCTCGAGAGGGTCTGGCTCTCGGCCGACCACAGA TCCCTACTCGGCTCCGTCTGCGTCGCCAACATGGCCTTCCACAAGCACGTCACCTGCCGCTTCACCTTTGACTAC TGGAAAACAGTGTCCGAGGTTGGCGCCGAGTACGGTCACGAAATTCGCCCCTACGACGGCCCCGCCACCCACGAT CGTTTTAACTTCTCCATTAGGCTCTCCGACGTGGTGAACCTCGAGTCCAAGACGCTCTACTTTTGCGTTCGTTAC TCTGTTAGCGGCCAGGAGTTTTGGGACAACAACGACTCCACCAACTTCCAGGTCGACTTCAAGAAAAAACACCTA CCGCAGAAGGGCAAGAACGGGCTCCCAGGCGCCACCTCGCGCTCCCTCAACGGCCTACCTAGAAGCAACAACCGC AGGTCAAACTCGGGCAGCTCGCTTCGGCCCATGTCCTTGCCGCCATCGCTCGACGCCTTCGGCCACGAAGCCATG GGCGCCGACATAGATTTTGATCAGCCCATTCACGAGTACCTCGGCGAGTCTGGGCCGACGACCGGTCTGCGCCTC AAGAACAAGTCGTCGACCAACCTTGCAAGCGACAACATCGCCCGCAACCTCACGTCGCCCAGTGGCGTTGCCTTT TCCAACCGTTATGACTTTGGCGCCTCGCTGAGTGCCGCCATGCAGGCCGCAAAGGATTCGGGCAGAGACAAGGAC ACGCTCTACATGAGGAGAAATGTTCGCGGAGCCGAGGCCGTCAAGGGCAAATCACAATCCGAGTCGCCGCTCGGC GCCTCGAGTTCGCCCAGCGGGACCCAGTCGCCGAACCCGAGCCTACCGAGCGCTTCATATGAGGAGCTCGTCAAC AAGTATTGCTTTGTACGTCCCTGACTTGCGTCGTTTTGGAGGCAGCTGCTGACTTTAGATCAGTTTGGCTCCAAA CAATCGAGTCCCATGATGACGGACGGAACAATGAGAGGCGGAGCCTACGATGGGTCCAAGGCTGGCTACGAGCCG GGAGAGGCAAAAGCGTCACCCCCGGAAAAGCGGACGGCGATGCACCACTCGATGCACCTCGAAGGCGCCACGTCA TACTTTCCACCCCTCACCGTGACGACGGGTGCCAGGGCACTGGCAGTCGGCTCGGGCACGCCTTCGAGCGAAATG CCGTTTCGCGGCCAGCCGTCTGACCGGTACCTCTGGACGACGGAGACGCAGACGGCGACAGCCATCTTGGGCTAG |