Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5545
Gene name
Locationscaffold_457:725..2900
Strand+
Gene length (bp)2175
Transcript length (bp)2124
Coding sequence length (bp)2121
Protein length (aa) 707

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03370 CBM_21 Carbohydrate/starch-binding module (family 21) 1.3E-32 310 418
PF16760 CBM53 Starch/carbohydrate-binding module (family 53) 2.2E-09 337 419

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5U2R5|PPR3C_RAT Protein phosphatase 1 regulatory subunit 3C OS=Rattus norvegicus GN=Ppp1r3c PE=2 SV=1 321 418 3.0E-13
sp|Q9UQK1|PPR3C_HUMAN Protein phosphatase 1 regulatory subunit 3C OS=Homo sapiens GN=PPP1R3C PE=1 SV=2 321 418 5.0E-13
sp|Q0VCR4|PPR3C_BOVIN Protein phosphatase 1 regulatory subunit 3C OS=Bos taurus GN=PPP1R3C PE=2 SV=1 321 418 5.0E-13
sp|O95685|PPR3D_HUMAN Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1 306 427 3.0E-11
sp|Q99MR9|PPR3A_MOUSE Protein phosphatase 1 regulatory subunit 3A OS=Mus musculus GN=Ppp1r3a PE=1 SV=2 306 450 2.0E-10
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Swissprot ID Swissprot Description Start End E-value
sp|Q5U2R5|PPR3C_RAT Protein phosphatase 1 regulatory subunit 3C OS=Rattus norvegicus GN=Ppp1r3c PE=2 SV=1 321 418 3.0E-13
sp|Q9UQK1|PPR3C_HUMAN Protein phosphatase 1 regulatory subunit 3C OS=Homo sapiens GN=PPP1R3C PE=1 SV=2 321 418 5.0E-13
sp|Q0VCR4|PPR3C_BOVIN Protein phosphatase 1 regulatory subunit 3C OS=Bos taurus GN=PPP1R3C PE=2 SV=1 321 418 5.0E-13
sp|O95685|PPR3D_HUMAN Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1 306 427 3.0E-11
sp|Q99MR9|PPR3A_MOUSE Protein phosphatase 1 regulatory subunit 3A OS=Mus musculus GN=Ppp1r3a PE=1 SV=2 306 450 2.0E-10
sp|Q8BRJ4|PPR3E_MOUSE Protein phosphatase 1 regulatory subunit 3E OS=Mus musculus GN=Ppp1r3e PE=1 SV=2 327 418 9.0E-10
sp|Q6DDQ5|PPR3C_XENLA Protein phosphatase 1 regulatory subunit 3C OS=Xenopus laevis GN=ppp1r3c PE=2 SV=1 305 418 2.0E-09
sp|Q6GQ68|PP3BB_XENLA Protein phosphatase 1 regulatory subunit 3B-B OS=Xenopus laevis GN=ppp1r3b-b PE=2 SV=1 307 418 3.0E-09
sp|P40187|PIG2_YEAST GSY2-interacting protein PIG2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIG2 PE=1 SV=1 312 419 3.0E-09
sp|Q7TMB3|PPR3C_MOUSE Protein phosphatase 1 regulatory subunit 3C OS=Mus musculus GN=Ppp1r3c PE=1 SV=1 321 418 4.0E-09
sp|P40036|GIP2_YEAST GLC7-interacting protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIP2 PE=1 SV=1 325 419 4.0E-09
sp|Q6P950|PR3CB_DANRE Protein phosphatase 1 regulatory subunit 3C-B OS=Danio rerio GN=ppp1r3cb PE=2 SV=1 306 418 5.0E-09
sp|Q00756|PPR3A_RABIT Protein phosphatase 1 regulatory subunit 3A OS=Oryctolagus cuniculus GN=PPP1R3A PE=1 SV=1 326 430 6.0E-09
sp|Q5BL87|PP3BA_XENLA Protein phosphatase 1 regulatory subunit 3B-A OS=Xenopus laevis GN=ppp1r3b-a PE=2 SV=1 307 426 1.0E-08
sp|A6QNP3|PPR3B_BOVIN Protein phosphatase 1 regulatory subunit 3B OS=Bos taurus GN=PPP1R3B PE=2 SV=1 307 418 1.0E-08
sp|Q86XI6|PPR3B_HUMAN Protein phosphatase 1 regulatory subunit 3B OS=Homo sapiens GN=PPP1R3B PE=1 SV=1 320 418 2.0E-08
sp|Q8C767|PPR3B_MOUSE Protein phosphatase 1 regulatory subunit 3B OS=Mus musculus GN=Ppp1r3b PE=1 SV=1 293 418 2.0E-08
sp|Q6IN01|PPR3B_RAT Protein phosphatase 1 regulatory subunit 3B OS=Rattus norvegicus GN=Ppp1r3b PE=1 SV=1 293 418 2.0E-08
sp|Q16821|PPR3A_HUMAN Protein phosphatase 1 regulatory subunit 3A OS=Homo sapiens GN=PPP1R3A PE=1 SV=3 326 423 3.0E-08
sp|P28006|GAC1_YEAST Serine/threonine-protein phosphatase 1 regulatory subunit GAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAC1 PE=1 SV=2 320 422 4.0E-08
sp|Q9VVY3|GBS76_DROME Glycogen-binding subunit 76A OS=Drosophila melanogaster GN=Gbs-76A PE=1 SV=1 221 416 4.0E-08
sp|Q803M0|PPR3B_DANRE Protein phosphatase 1 regulatory subunit 3B OS=Danio rerio GN=ppp1r3b PE=2 SV=1 313 418 3.0E-07
sp|Q6GL23|PPR3C_XENTR Protein phosphatase 1 regulatory subunit 3C OS=Xenopus tropicalis GN=ppp1r3c PE=2 SV=1 326 435 3.0E-07
sp|Q28E28|PPR3B_XENTR Protein phosphatase 1 regulatory subunit 3B OS=Xenopus tropicalis GN=ppp1r3b PE=2 SV=1 307 424 2.0E-06
sp|P0C7L8|PPR3E_RAT Protein phosphatase 1 regulatory subunit 3E OS=Rattus norvegicus GN=Ppp1r3e PE=2 SV=1 329 418 8.0E-06
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GO

GO Term Description Terminal node
GO:2001070 starch binding Yes
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0030246 carbohydrate binding No
GO:0030247 polysaccharide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 72.47 38.92 106.01
CcL In ants, during behavior modification 305.13 96.27 513.98
CcD In ants, recently dead 199.44 92.77 306.11

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000286 yes
SC16a CcD 0.000286 yes
CcL CcD 0.165229 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5545
MPYTPPSQLSPPSSASTSPLVSRRSSVQSGSQPALPRSASYLNKHRRTPSIQDGCAARGIETERATAANTVANSA
ANSTSPVKPPLSSPRPDDQPPTSPVSSASCDDYQDAASQLDSYQSLRDAVSQISQPRNPSPPPAPTDPMGPTEPM
RVSLSTTALDGLAAKCSRSTGHVRSATDSNAPTISADSSLTASDEDTDEDLKFKPPMLRKKSGELVRPALRPSSH
RRPSSVPGTPIFSKAVHFDSHLEHVRHFLQVDRPLAVSAGSSPIDNHESDSEYPFPEVKSGVRSPPYEWELVTTN
FPRQVRLRNTLPVRLERVWLSADHRSLLGSVCVANMAFHKHVTCRFTFDYWKTVSEVGAEYGHEIRPYDGPATHD
RFNFSIRLSDVVNLESKTLYFCVRYSVSGQEFWDNNDSTNFQVDFKKKHLPQKGKNGLPGATSRSLNGLPRSNNR
RSNSGSSLRPMSLPPSLDAFGHEAMGADIDFDQPIHEYLGESGPTTGLRLKNKSSTNLASDNIARNLTSPSGVAF
SNRYDFGASLSAAMQAAKDSGRDKDTLYMRRNVRGAEAVKGKSQSESPLGASSSPSGTQSPNPSLPSASYEELVN
KYCFFGSKQSSPMMTDGTMRGGAYDGSKAGYEPGEAKASPPEKRTAMHHSMHLEGATSYFPPLTVTTGARALAVG
SGTPSSEMPFRGQPSDRYLWTTETQTATAILG
Coding >Ophio5|5545
ATGCCTTATACGCCCCCTTCGCAGCTATCTCCTCCGTCCTCGGCCTCGACGTCGCCCCTCGTGAGCCGTCGCTCG
TCGGTCCAATCGGGCTCTCAACCCGCCCTCCCTCGGTCCGCCTCTTACCTCAACAAGCATCGTCGCACCCCCTCG
ATACAAGATGGCTGTGCCGCCCGTGGCATCGAGACGGAGCGCGCCACGGCTGCCAACACGGTCGCAAACTCAGCC
GCCAATTCGACCAGTCCCGTGAAGCCGCCGCTGAGTTCGCCCCGACCCGACGATCAACCCCCCACGTCACCCGTC
TCGTCTGCCAGCTGCGACGACTACCAAGACGCTGCCAGCCAGCTTGACTCCTACCAGAGCCTGCGAGATGCCGTC
AGCCAGATCTCTCAGCCCCGCAACCCGTCCCCTCCCCCCGCCCCGACGGATCCGATGGGGCCAACAGAGCCCATG
AGGGTCAGCCTTAGCACGACGGCCCTCGACGGCCTGGCCGCTAAATGCTCACGCTCCACTGGCCATGTTCGATCC
GCGACGGATTCCAACGCGCCCACCATTTCCGCCGACTCGTCTCTTACGGCCTCGGACGAGGATACCGACGAGGAC
CTCAAGTTCAAGCCTCCGATGCTGCGCAAAAAGTCCGGCGAGCTCGTCCGGCCCGCACTTCGCCCATCGTCGCAT
CGCCGTCCGTCCAGCGTCCCTGGCACGCCCATCTTTTCCAAGGCTGTTCATTTTGACTCTCACCTGGAGCACGTC
CGCCACTTTCTTCAGGTTGACCGCCCCCTCGCCGTCAGTGCCGGCTCCTCGCCCATCGACAACCACGAGAGCGAC
AGTGAATATCCCTTCCCCGAGGTCAAGTCGGGTGTCCGCTCGCCCCCCTACGAGTGGGAGCTCGTCACCACAAAC
TTTCCCCGCCAAGTCCGCCTGCGTAATACGCTACCTGTCCGGCTCGAGAGGGTCTGGCTCTCGGCCGACCACAGA
TCCCTACTCGGCTCCGTCTGCGTCGCCAACATGGCCTTCCACAAGCACGTCACCTGCCGCTTCACCTTTGACTAC
TGGAAAACAGTGTCCGAGGTTGGCGCCGAGTACGGTCACGAAATTCGCCCCTACGACGGCCCCGCCACCCACGAT
CGTTTTAACTTCTCCATTAGGCTCTCCGACGTGGTGAACCTCGAGTCCAAGACGCTCTACTTTTGCGTTCGTTAC
TCTGTTAGCGGCCAGGAGTTTTGGGACAACAACGACTCCACCAACTTCCAGGTCGACTTCAAGAAAAAACACCTA
CCGCAGAAGGGCAAGAACGGGCTCCCAGGCGCCACCTCGCGCTCCCTCAACGGCCTACCTAGAAGCAACAACCGC
AGGTCAAACTCGGGCAGCTCGCTTCGGCCCATGTCCTTGCCGCCATCGCTCGACGCCTTCGGCCACGAAGCCATG
GGCGCCGACATAGATTTTGATCAGCCCATTCACGAGTACCTCGGCGAGTCTGGGCCGACGACCGGTCTGCGCCTC
AAGAACAAGTCGTCGACCAACCTTGCAAGCGACAACATCGCCCGCAACCTCACGTCGCCCAGTGGCGTTGCCTTT
TCCAACCGTTATGACTTTGGCGCCTCGCTGAGTGCCGCCATGCAGGCCGCAAAGGATTCGGGCAGAGACAAGGAC
ACGCTCTACATGAGGAGAAATGTTCGCGGAGCCGAGGCCGTCAAGGGCAAATCACAATCCGAGTCGCCGCTCGGC
GCCTCGAGTTCGCCCAGCGGGACCCAGTCGCCGAACCCGAGCCTACCGAGCGCTTCATATGAGGAGCTCGTCAAC
AAGTATTGCTTTTTTGGCTCCAAACAATCGAGTCCCATGATGACGGACGGAACAATGAGAGGCGGAGCCTACGAT
GGGTCCAAGGCTGGCTACGAGCCGGGAGAGGCAAAAGCGTCACCCCCGGAAAAGCGGACGGCGATGCACCACTCG
ATGCACCTCGAAGGCGCCACGTCATACTTTCCACCCCTCACCGTGACGACGGGTGCCAGGGCACTGGCAGTCGGC
TCGGGCACGCCTTCGAGCGAAATGCCGTTTCGCGGCCAGCCGTCTGACCGGTACCTCTGGACGACGGAGACGCAG
ACGGCGACAGCCATCTTGGGC
Transcript >Ophio5|5545
ATGCCTTATACGCCCCCTTCGCAGCTATCTCCTCCGTCCTCGGCCTCGACGTCGCCCCTCGTGAGCCGTCGCTCG
TCGGTCCAATCGGGCTCTCAACCCGCCCTCCCTCGGTCCGCCTCTTACCTCAACAAGCATCGTCGCACCCCCTCG
ATACAAGATGGCTGTGCCGCCCGTGGCATCGAGACGGAGCGCGCCACGGCTGCCAACACGGTCGCAAACTCAGCC
GCCAATTCGACCAGTCCCGTGAAGCCGCCGCTGAGTTCGCCCCGACCCGACGATCAACCCCCCACGTCACCCGTC
TCGTCTGCCAGCTGCGACGACTACCAAGACGCTGCCAGCCAGCTTGACTCCTACCAGAGCCTGCGAGATGCCGTC
AGCCAGATCTCTCAGCCCCGCAACCCGTCCCCTCCCCCCGCCCCGACGGATCCGATGGGGCCAACAGAGCCCATG
AGGGTCAGCCTTAGCACGACGGCCCTCGACGGCCTGGCCGCTAAATGCTCACGCTCCACTGGCCATGTTCGATCC
GCGACGGATTCCAACGCGCCCACCATTTCCGCCGACTCGTCTCTTACGGCCTCGGACGAGGATACCGACGAGGAC
CTCAAGTTCAAGCCTCCGATGCTGCGCAAAAAGTCCGGCGAGCTCGTCCGGCCCGCACTTCGCCCATCGTCGCAT
CGCCGTCCGTCCAGCGTCCCTGGCACGCCCATCTTTTCCAAGGCTGTTCATTTTGACTCTCACCTGGAGCACGTC
CGCCACTTTCTTCAGGTTGACCGCCCCCTCGCCGTCAGTGCCGGCTCCTCGCCCATCGACAACCACGAGAGCGAC
AGTGAATATCCCTTCCCCGAGGTCAAGTCGGGTGTCCGCTCGCCCCCCTACGAGTGGGAGCTCGTCACCACAAAC
TTTCCCCGCCAAGTCCGCCTGCGTAATACGCTACCTGTCCGGCTCGAGAGGGTCTGGCTCTCGGCCGACCACAGA
TCCCTACTCGGCTCCGTCTGCGTCGCCAACATGGCCTTCCACAAGCACGTCACCTGCCGCTTCACCTTTGACTAC
TGGAAAACAGTGTCCGAGGTTGGCGCCGAGTACGGTCACGAAATTCGCCCCTACGACGGCCCCGCCACCCACGAT
CGTTTTAACTTCTCCATTAGGCTCTCCGACGTGGTGAACCTCGAGTCCAAGACGCTCTACTTTTGCGTTCGTTAC
TCTGTTAGCGGCCAGGAGTTTTGGGACAACAACGACTCCACCAACTTCCAGGTCGACTTCAAGAAAAAACACCTA
CCGCAGAAGGGCAAGAACGGGCTCCCAGGCGCCACCTCGCGCTCCCTCAACGGCCTACCTAGAAGCAACAACCGC
AGGTCAAACTCGGGCAGCTCGCTTCGGCCCATGTCCTTGCCGCCATCGCTCGACGCCTTCGGCCACGAAGCCATG
GGCGCCGACATAGATTTTGATCAGCCCATTCACGAGTACCTCGGCGAGTCTGGGCCGACGACCGGTCTGCGCCTC
AAGAACAAGTCGTCGACCAACCTTGCAAGCGACAACATCGCCCGCAACCTCACGTCGCCCAGTGGCGTTGCCTTT
TCCAACCGTTATGACTTTGGCGCCTCGCTGAGTGCCGCCATGCAGGCCGCAAAGGATTCGGGCAGAGACAAGGAC
ACGCTCTACATGAGGAGAAATGTTCGCGGAGCCGAGGCCGTCAAGGGCAAATCACAATCCGAGTCGCCGCTCGGC
GCCTCGAGTTCGCCCAGCGGGACCCAGTCGCCGAACCCGAGCCTACCGAGCGCTTCATATGAGGAGCTCGTCAAC
AAGTATTGCTTTTTTGGCTCCAAACAATCGAGTCCCATGATGACGGACGGAACAATGAGAGGCGGAGCCTACGAT
GGGTCCAAGGCTGGCTACGAGCCGGGAGAGGCAAAAGCGTCACCCCCGGAAAAGCGGACGGCGATGCACCACTCG
ATGCACCTCGAAGGCGCCACGTCATACTTTCCACCCCTCACCGTGACGACGGGTGCCAGGGCACTGGCAGTCGGC
TCGGGCACGCCTTCGAGCGAAATGCCGTTTCGCGGCCAGCCGTCTGACCGGTACCTCTGGACGACGGAGACGCAG
ACGGCGACAGCCATCTTGGGCTAG
Gene >Ophio5|5545
ATGCCTTATACGCCCCCTTCGCAGCTATCTCCTCCGTCCTCGGCCTCGACGTCGCCCCTCGTGAGCCGTCGCTCG
TCGGTCCAATCGGGCTCTCAACCCGCCCTCCCTCGGTCCGCCTCTTACCTCAACAAGCATCGTCGCACCCCCTCG
ATACAAGATGGCTGTGCCGCCCGTGGCATCGAGACGGAGCGCGCCACGGCTGCCAACACGGTCGCAAACTCAGCC
GCCAATTCGACCAGTCCCGTGAAGCCGCCGCTGAGTTCGCCCCGACCCGACGATCAACCCCCCACGTCACCCGTC
TCGTCTGCCAGCTGCGACGACTACCAAGACGCTGCCAGCCAGCTTGACTCCTACCAGAGCCTGCGAGATGCCGTC
AGCCAGATCTCTCAGCCCCGCAACCCGTCCCCTCCCCCCGCCCCGACGGATCCGATGGGGCCAACAGAGCCCATG
AGGGTCAGCCTTAGCACGACGGCCCTCGACGGCCTGGCCGCTAAATGCTCACGCTCCACTGGCCATGTTCGATCC
GCGACGGATTCCAACGCGCCCACCATTTCCGCCGACTCGTCTCTTACGGCCTCGGACGAGGATACCGACGAGGAC
CTCAAGTTCAAGCCTCCGATGCTGCGCAAAAAGTCCGGCGAGCTCGTCCGGCCCGCACTTCGCCCATCGTCGCAT
CGCCGTCCGTCCAGCGTCCCTGGCACGCCCATCTTTTCCAAGGCTGTTCATTTTGACTCTCACCTGGAGCACGTC
CGCCACTTTCTTCAGGTTGACCGCCCCCTCGCCGTCAGTGCCGGCTCCTCGCCCATCGACAACCACGAGAGCGAC
AGTGAATATCCCTTCCCCGAGGTCAAGTCGGGTGTCCGCTCGCCCCCCTACGAGTGGGAGCTCGTCACCACAAAC
TTTCCCCGCCAAGTCCGCCTGCGTAATACGCTACCTGTCCGGCTCGAGAGGGTCTGGCTCTCGGCCGACCACAGA
TCCCTACTCGGCTCCGTCTGCGTCGCCAACATGGCCTTCCACAAGCACGTCACCTGCCGCTTCACCTTTGACTAC
TGGAAAACAGTGTCCGAGGTTGGCGCCGAGTACGGTCACGAAATTCGCCCCTACGACGGCCCCGCCACCCACGAT
CGTTTTAACTTCTCCATTAGGCTCTCCGACGTGGTGAACCTCGAGTCCAAGACGCTCTACTTTTGCGTTCGTTAC
TCTGTTAGCGGCCAGGAGTTTTGGGACAACAACGACTCCACCAACTTCCAGGTCGACTTCAAGAAAAAACACCTA
CCGCAGAAGGGCAAGAACGGGCTCCCAGGCGCCACCTCGCGCTCCCTCAACGGCCTACCTAGAAGCAACAACCGC
AGGTCAAACTCGGGCAGCTCGCTTCGGCCCATGTCCTTGCCGCCATCGCTCGACGCCTTCGGCCACGAAGCCATG
GGCGCCGACATAGATTTTGATCAGCCCATTCACGAGTACCTCGGCGAGTCTGGGCCGACGACCGGTCTGCGCCTC
AAGAACAAGTCGTCGACCAACCTTGCAAGCGACAACATCGCCCGCAACCTCACGTCGCCCAGTGGCGTTGCCTTT
TCCAACCGTTATGACTTTGGCGCCTCGCTGAGTGCCGCCATGCAGGCCGCAAAGGATTCGGGCAGAGACAAGGAC
ACGCTCTACATGAGGAGAAATGTTCGCGGAGCCGAGGCCGTCAAGGGCAAATCACAATCCGAGTCGCCGCTCGGC
GCCTCGAGTTCGCCCAGCGGGACCCAGTCGCCGAACCCGAGCCTACCGAGCGCTTCATATGAGGAGCTCGTCAAC
AAGTATTGCTTTGTACGTCCCTGACTTGCGTCGTTTTGGAGGCAGCTGCTGACTTTAGATCAGTTTGGCTCCAAA
CAATCGAGTCCCATGATGACGGACGGAACAATGAGAGGCGGAGCCTACGATGGGTCCAAGGCTGGCTACGAGCCG
GGAGAGGCAAAAGCGTCACCCCCGGAAAAGCGGACGGCGATGCACCACTCGATGCACCTCGAAGGCGCCACGTCA
TACTTTCCACCCCTCACCGTGACGACGGGTGCCAGGGCACTGGCAGTCGGCTCGGGCACGCCTTCGAGCGAAATG
CCGTTTCGCGGCCAGCCGTCTGACCGGTACCTCTGGACGACGGAGACGCAGACGGCGACAGCCATCTTGGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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