Protein ID | Ophio5|553 |
Gene name | |
Location | scaffold_114:34096..34628 |
Strand | + |
Gene length (bp) | 532 |
Transcript length (bp) | 414 |
Coding sequence length (bp) | 411 |
Protein length (aa) | 137 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03987 | Autophagy_act_C | Autophagocytosis associated protein, active-site domain | 1.3E-26 | 5 | 132 |
GO Term | Description | Terminal node |
---|---|---|
GO:0019787 | ubiquitin-like protein transferase activity | Yes |
GO:0140096 | catalytic activity, acting on a protein | No |
GO:0003824 | catalytic activity | No |
GO:0016740 | transferase activity | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Nuclear export signal | 0.7808 | 0.4881 | 0.1872 | 0.1794 | 0.1937 | 0.0022 | 0.1419 | 0.2598 | 0.172 | 0.0082 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 114 | 131 | 17 |
Orthofinder run ID | 4 |
Orthogroup | 3722 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|553 MISAEESDSAAIVKDMSHGDAALVTYEIHLHSSYRVPCLWFTFHNLPVDEPAFSIDTVFRRLVPEEYKSRLQGLG AVGGISADHHPITGVPAFFIHPCLLGDAISGFQCSLDNYLMIWLGLVGGCVGLWVPREMALQ |
Coding | >Ophio5|553 ATGATAAGTGCAGAAGAGTCTGATTCAGCGGCCATCGTCAAAGACATGTCACATGGCGACGCTGCTCTTGTTACC TATGAGATCCATCTCCACTCCTCCTACAGGGTCCCATGCCTGTGGTTCACCTTCCACAACCTCCCTGTGGATGAA CCCGCCTTTAGCATCGACACAGTCTTCCGCCGCCTGGTCCCCGAGGAGTACAAAAGCAGGCTTCAAGGATTAGGC GCCGTAGGTGGCATCTCGGCGGACCATCATCCCATCACGGGGGTTCCAGCCTTCTTCATCCATCCATGCCTGCTC GGGGACGCCATATCGGGCTTCCAGTGCTCCCTCGACAACTACCTCATGATCTGGCTCGGACTTGTAGGGGGGTGC GTGGGCCTCTGGGTGCCAAGAGAAATGGCCTTACAG |
Transcript | >Ophio5|553 ATGATAAGTGCAGAAGAGTCTGATTCAGCGGCCATCGTCAAAGACATGTCACATGGCGACGCTGCTCTTGTTACC TATGAGATCCATCTCCACTCCTCCTACAGGGTCCCATGCCTGTGGTTCACCTTCCACAACCTCCCTGTGGATGAA CCCGCCTTTAGCATCGACACAGTCTTCCGCCGCCTGGTCCCCGAGGAGTACAAAAGCAGGCTTCAAGGATTAGGC GCCGTAGGTGGCATCTCGGCGGACCATCATCCCATCACGGGGGTTCCAGCCTTCTTCATCCATCCATGCCTGCTC GGGGACGCCATATCGGGCTTCCAGTGCTCCCTCGACAACTACCTCATGATCTGGCTCGGACTTGTAGGGGGGTGC GTGGGCCTCTGGGTGCCAAGAGAAATGGCCTTACAGTAG |
Gene | >Ophio5|553 ATGATAAGTGCAGAAGAGTCTGATTCAGTACGGGACGCTCTGTCGGCTCGTCTCCCTTGTCCTGACCATTCCCAG GCGGCCATCGTCAAAGACATGTCACATGGCGACGCTGCTCTTGTTACCTATGAGATCCATCTCCACTCCTCCTAC AGGGTCCCATGCCTGTGGTTCACCTTCCACAACCTCCCTGTGGATGAACCCGCCTTTAGCATCGACACAGTCTTC CGCCGCCTGGTCCCCGAGGAGTACAAAAGCAGGCTTCAAGGATTAGGCGCCGTAGGTGGCATCTCGGCGGACGTA AGTCGACGCCGCTCTCGCCAGGACACTAACGGTATCGGCCGAGTCAGCGCTGACGGTCCCGTAACAGCATCATCC CATCACGGGGGTTCCAGCCTTCTTCATCCATCCATGCCTGCTCGGGGACGCCATATCGGGCTTCCAGTGCTCCCT CGACAACTACCTCATGATCTGGCTCGGACTTGTAGGGGGGTGCGTGGGCCTCTGGGTGCCAAGAGAAATGGCCTT ACAGTAG |