Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5529
Gene name
Locationscaffold_455:653..2529
Strand+
Gene length (bp)1876
Transcript length (bp)1734
Coding sequence length (bp)1731
Protein length (aa) 577

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01794 Ferric_reduct Ferric reductase like transmembrane component 6.1E-15 120 231
PF08030 NAD_binding_6 Ferric reductase NAD binding domain 3.0E-13 368 557
PF08022 FAD_binding_8 FAD-binding domain 1.6E-05 275 361

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P78588|FREL_CANAX Probable ferric reductase transmembrane component OS=Candida albicans GN=CFL1 PE=3 SV=1 75 436 2.0E-24
sp|Q5A446|FRE1_CANAL Ferric/cupric reductase transmembrane component 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CFL1 PE=2 SV=1 75 436 4.0E-24
sp|P36033|FRE2_YEAST Ferric/cupric reductase transmembrane component 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE2 PE=1 SV=1 120 577 3.0E-20
sp|Q08905|FRE3_YEAST Ferric reductase transmembrane component 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE3 PE=1 SV=1 138 577 3.0E-19
sp|P53746|FRE4_YEAST Ferric reductase transmembrane component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE4 PE=2 SV=1 120 577 3.0E-17
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Swissprot ID Swissprot Description Start End E-value
sp|P78588|FREL_CANAX Probable ferric reductase transmembrane component OS=Candida albicans GN=CFL1 PE=3 SV=1 75 436 2.0E-24
sp|Q5A446|FRE1_CANAL Ferric/cupric reductase transmembrane component 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CFL1 PE=2 SV=1 75 436 4.0E-24
sp|P36033|FRE2_YEAST Ferric/cupric reductase transmembrane component 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE2 PE=1 SV=1 120 577 3.0E-20
sp|Q08905|FRE3_YEAST Ferric reductase transmembrane component 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE3 PE=1 SV=1 138 577 3.0E-19
sp|P53746|FRE4_YEAST Ferric reductase transmembrane component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE4 PE=2 SV=1 120 577 3.0E-17
sp|Q04800|FRP1_SCHPO Ferric reductase transmembrane component 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=frp1 PE=1 SV=1 120 445 6.0E-16
sp|P32791|FRE1_YEAST Ferric/cupric reductase transmembrane component 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE1 PE=1 SV=1 127 577 2.0E-15
sp|O94727|FRP2_SCHPO Ferric/cupric reductase transmembrane component 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=frp2 PE=3 SV=1 108 431 3.0E-15
sp|Q08908|FRE5_YEAST Ferric reductase transmembrane component 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE5 PE=2 SV=1 120 459 3.0E-15
sp|F4I4K7|FRO3_ARATH Ferric reduction oxidase 3, mitochondrial OS=Arabidopsis thaliana GN=FRO3 PE=2 SV=1 153 381 2.0E-14
sp|Q8RWS6|FRO6_ARATH Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1 118 408 4.0E-13
sp|A6ZN61|FRE7_YEAS7 Ferric/cupric reductase transmembrane component 7 OS=Saccharomyces cerevisiae (strain YJM789) GN=FRE7 PE=3 SV=1 25 478 4.0E-12
sp|Q12333|FRE7_YEAST Ferric/cupric reductase transmembrane component 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE7 PE=1 SV=2 25 478 8.0E-12
sp|Q3KTM0|FRO7_ARATH Ferric reduction oxidase 7, chloroplastic OS=Arabidopsis thaliana GN=FRO7 PE=2 SV=1 118 408 1.0E-11
sp|Q8W110|FRO4_ARATH Ferric reduction oxidase 4 OS=Arabidopsis thaliana GN=FRO4 PE=2 SV=1 192 442 8.0E-10
sp|Q9LMM2|FRO1_ARATH Probable ferric reduction oxidase 1 OS=Arabidopsis thaliana GN=FRO1 PE=2 SV=1 167 381 1.0E-09
sp|Q9FLW2|FRO5_ARATH Ferric reduction oxidase 5 OS=Arabidopsis thaliana GN=FRO5 PE=2 SV=1 192 442 2.0E-09
sp|Q8VY13|FRO8_ARATH Ferric reduction oxidase 8, mitochondrial OS=Arabidopsis thaliana GN=FRO8 PE=2 SV=1 209 475 4.0E-09
sp|Q6C188|AIM14_YARLI Probable metalloreductase AIM14 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=AIM14 PE=3 SV=1 119 428 5.0E-09
sp|Q12473|FRE6_YEAST Ferric reductase transmembrane component 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRE6 PE=1 SV=1 120 360 6.0E-09
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 77 99 22
3 120 142 22
4 155 177 22
5 190 209 19
6 213 235 22
7 242 261 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 6.98 2.38 11.58
CcL In ants, during behavior modification 9.65 3.76 15.53
CcD In ants, recently dead 7.11 2.57 11.66

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.347174 no
SC16a CcD 0.966252 no
CcL CcD 0.372630 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5529
MAGPDAAFAAKLAHRTRHNEVLMLYFLAAMLGLVVVFSAAHLLRRSRDGEAASSSPLVRLSRCFRRFALRSCRGV
PTLGHALLVGLYVMANCLVFFVHLDGGGDMPRLSNVGSRTAWLRLSLGNLVVVVVLGLKVTPLALLTGRSYDRLN
VLHRVAGATTVSLVILHASCYTAYFVGTGRGQRLLRSSDICGMVAGLSMLGLAAAGFFLRRRFYEVFYYLHISLW
LLALVMTALHQPDLDRHAVVVLVAVVGGVWALDRLLRLVRFAIGAVGNSARLTTLPDQSTRVILAKPPLGASSGM
HCFLWLPGMRPGQSHPFTIAGLNPPELIVAPAGGFARVLHGYADANAGNSVLAAVEGPYGAGPSPAAYSSVVFIA
GGSGITFTLGSALDMLRTDQNQRVLFVWIVKTTASFDSLRHRLATLRDDPRVTLRLFVTRPPPTPATPATPASIH
EPVELLTLSLPTTHSSADSDQDLDPEKAWSGPTLRSDKWQPPSDVHVQTTRVLTNRPSNVNGIAIAYERPNVASL
IRAAIDDTPPDRRALVLGCGPGPLMTVVRNTTASCIRGDGPAVDLHIENFAW
Coding >Ophio5|5529
ATGGCTGGCCCGGATGCCGCCTTTGCGGCCAAGCTGGCGCACCGCACCCGACACAACGAGGTGCTGATGTTGTAT
TTCCTGGCCGCCATGCTCGGTCTCGTCGTCGTCTTCTCTGCTGCTCATCTGCTACGTCGTTCGCGAGACGGGGAG
GCTGCTTCCTCGTCTCCCCTTGTCCGCCTTTCACGATGCTTTCGCCGTTTCGCTCTTCGCAGCTGTCGTGGTGTG
CCGACCTTGGGTCACGCCCTGCTGGTAGGGCTCTACGTCATGGCAAACTGTCTCGTCTTCTTCGTCCACCTCGAT
GGTGGTGGCGATATGCCGAGGCTATCCAACGTCGGCTCCCGCACGGCCTGGCTCAGGCTCTCCCTTGGCAACCTC
GTCGTCGTCGTCGTCCTCGGCCTCAAGGTGACGCCCCTGGCCCTGCTGACGGGCCGGTCGTACGACCGTCTCAAC
GTGCTACACCGCGTGGCCGGCGCAACCACCGTGTCCTTGGTCATCCTTCATGCCAGCTGCTATACCGCCTACTTC
GTCGGTACGGGCCGTGGCCAACGCTTGCTCCGTTCATCTGATATCTGCGGCATGGTGGCCGGTCTCTCCATGCTT
GGTCTCGCCGCCGCCGGCTTCTTCCTTCGTCGTCGTTTCTATGAGGTCTTCTACTATCTTCACATCTCCCTTTGG
CTGCTGGCCCTCGTCATGACGGCTCTCCATCAGCCTGACTTGGACCGTCACGCCGTCGTCGTCCTCGTCGCCGTC
GTCGGCGGTGTCTGGGCCCTTGATCGTCTGCTTCGTCTCGTCCGCTTCGCCATCGGTGCCGTCGGAAACTCGGCC
CGTCTGACGACGTTGCCGGATCAGAGCACCCGCGTCATCTTGGCCAAGCCGCCGCTCGGCGCCTCTTCCGGCATG
CACTGCTTCCTGTGGCTTCCCGGCATGAGGCCTGGCCAGTCACACCCCTTCACCATAGCCGGCCTCAACCCCCCG
GAGCTGATCGTCGCCCCCGCCGGCGGCTTCGCTCGCGTCCTGCACGGTTATGCCGACGCCAACGCCGGCAACTCC
GTCTTGGCCGCCGTCGAGGGCCCTTACGGCGCCGGCCCGTCTCCGGCCGCTTACTCGTCCGTCGTCTTCATCGCC
GGAGGCAGCGGCATCACCTTCACCCTCGGCAGCGCTCTCGATATGCTTCGCACCGACCAGAACCAGCGGGTGCTC
TTCGTCTGGATCGTCAAAACGACGGCCAGCTTCGACAGCCTCCGCCACCGTCTCGCCACGCTCCGCGATGACCCG
CGCGTCACCCTCCGGCTCTTCGTGACCCGGCCGCCTCCGACGCCGGCCACGCCAGCAACGCCCGCCTCGATCCAT
GAGCCCGTCGAGCTCCTGACGCTGTCCCTGCCCACGACGCACAGCTCGGCCGATTCGGACCAAGATTTGGATCCG
GAGAAGGCCTGGTCTGGCCCGACGCTACGCTCCGACAAGTGGCAGCCGCCGTCCGACGTCCACGTCCAGACGACG
CGCGTTCTCACCAACCGGCCGTCCAACGTCAACGGCATTGCCATCGCCTACGAGCGGCCCAATGTCGCCTCCTTG
ATCCGCGCCGCCATCGACGACACGCCGCCGGACCGTCGCGCCCTCGTCCTCGGCTGCGGGCCGGGCCCGTTGATG
ACCGTCGTGCGGAATACAACGGCCTCCTGCATCCGGGGTGACGGCCCGGCCGTAGACCTTCACATCGAGAACTTT
GCGTGG
Transcript >Ophio5|5529
ATGGCTGGCCCGGATGCCGCCTTTGCGGCCAAGCTGGCGCACCGCACCCGACACAACGAGGTGCTGATGTTGTAT
TTCCTGGCCGCCATGCTCGGTCTCGTCGTCGTCTTCTCTGCTGCTCATCTGCTACGTCGTTCGCGAGACGGGGAG
GCTGCTTCCTCGTCTCCCCTTGTCCGCCTTTCACGATGCTTTCGCCGTTTCGCTCTTCGCAGCTGTCGTGGTGTG
CCGACCTTGGGTCACGCCCTGCTGGTAGGGCTCTACGTCATGGCAAACTGTCTCGTCTTCTTCGTCCACCTCGAT
GGTGGTGGCGATATGCCGAGGCTATCCAACGTCGGCTCCCGCACGGCCTGGCTCAGGCTCTCCCTTGGCAACCTC
GTCGTCGTCGTCGTCCTCGGCCTCAAGGTGACGCCCCTGGCCCTGCTGACGGGCCGGTCGTACGACCGTCTCAAC
GTGCTACACCGCGTGGCCGGCGCAACCACCGTGTCCTTGGTCATCCTTCATGCCAGCTGCTATACCGCCTACTTC
GTCGGTACGGGCCGTGGCCAACGCTTGCTCCGTTCATCTGATATCTGCGGCATGGTGGCCGGTCTCTCCATGCTT
GGTCTCGCCGCCGCCGGCTTCTTCCTTCGTCGTCGTTTCTATGAGGTCTTCTACTATCTTCACATCTCCCTTTGG
CTGCTGGCCCTCGTCATGACGGCTCTCCATCAGCCTGACTTGGACCGTCACGCCGTCGTCGTCCTCGTCGCCGTC
GTCGGCGGTGTCTGGGCCCTTGATCGTCTGCTTCGTCTCGTCCGCTTCGCCATCGGTGCCGTCGGAAACTCGGCC
CGTCTGACGACGTTGCCGGATCAGAGCACCCGCGTCATCTTGGCCAAGCCGCCGCTCGGCGCCTCTTCCGGCATG
CACTGCTTCCTGTGGCTTCCCGGCATGAGGCCTGGCCAGTCACACCCCTTCACCATAGCCGGCCTCAACCCCCCG
GAGCTGATCGTCGCCCCCGCCGGCGGCTTCGCTCGCGTCCTGCACGGTTATGCCGACGCCAACGCCGGCAACTCC
GTCTTGGCCGCCGTCGAGGGCCCTTACGGCGCCGGCCCGTCTCCGGCCGCTTACTCGTCCGTCGTCTTCATCGCC
GGAGGCAGCGGCATCACCTTCACCCTCGGCAGCGCTCTCGATATGCTTCGCACCGACCAGAACCAGCGGGTGCTC
TTCGTCTGGATCGTCAAAACGACGGCCAGCTTCGACAGCCTCCGCCACCGTCTCGCCACGCTCCGCGATGACCCG
CGCGTCACCCTCCGGCTCTTCGTGACCCGGCCGCCTCCGACGCCGGCCACGCCAGCAACGCCCGCCTCGATCCAT
GAGCCCGTCGAGCTCCTGACGCTGTCCCTGCCCACGACGCACAGCTCGGCCGATTCGGACCAAGATTTGGATCCG
GAGAAGGCCTGGTCTGGCCCGACGCTACGCTCCGACAAGTGGCAGCCGCCGTCCGACGTCCACGTCCAGACGACG
CGCGTTCTCACCAACCGGCCGTCCAACGTCAACGGCATTGCCATCGCCTACGAGCGGCCCAATGTCGCCTCCTTG
ATCCGCGCCGCCATCGACGACACGCCGCCGGACCGTCGCGCCCTCGTCCTCGGCTGCGGGCCGGGCCCGTTGATG
ACCGTCGTGCGGAATACAACGGCCTCCTGCATCCGGGGTGACGGCCCGGCCGTAGACCTTCACATCGAGAACTTT
GCGTGGTGA
Gene >Ophio5|5529
ATGGCTGGCCCGGATGCCGCCTTTGCGGCCAAGCTGGCGCACCGCACCCGACACAACGAGGTGCTGATGTTGTAT
TTCCTGGCCGCCATGCTCGGTCTCGTCGTCGTCTTCTCTGCTGCTCATCTGCTACGTCGTTCGCGAGACGGGGAG
GCTGCTTCCTCGTCTCCCCTTGTCCGCCTTTCACGGTGAGTCTCCGGGGGGGGGGGAAGATGATGGCAAGTCGAG
ACCCGTATGCTAATCCTTTTTTCTTTCTTTCTTTCTTTCTCCTCAGATGCTTTCGCCGTTTCGCTCTTCGCAGCT
GTCGTGGTGTGCCGACCTTGGGTCACGCCCTGCTGGTAGGGCTCTACGTCATGGCAAACTGTCTCGTCTTCTTCG
TCCACCTCGATGGTGGTGGCGATATGCCGAGGCTATCCAACGTCGGCTCCCGCACGGCCTGGTCAGTTCTCTTTT
CTCTTTCCCCAATCTCTTCCCGCTCTTGGAACTTAGGCAAAGGCTCAGGCTCTCCCTTGGCAACCTCGTCGTCGT
CGTCGTCCTCGGCCTCAAGGTGACGCCCCTGGCCCTGCTGACGGGCCGGTCGTACGACCGTCTCAACGTGCTACA
CCGCGTGGCCGGCGCAACCACCGTGTCCTTGGTCATCCTTCATGCCAGCTGCTATACCGCCTACTTCGTCGGTAC
GGGCCGTGGCCAACGCTTGCTCCGTTCATCTGATATCTGCGGCATGGTGGCCGGTCTCTCCATGCTTGGTCTCGC
CGCCGCCGGCTTCTTCCTTCGTCGTCGTTTCTATGAGGTCTTCTACTATCTTCACATCTCCCTTTGGCTGCTGGC
CCTCGTCATGACGGCTCTCCATCAGCCTGACTTGGACCGTCACGCCGTCGTCGTCCTCGTCGCCGTCGTCGGCGG
TGTCTGGGCCCTTGATCGTCTGCTTCGTCTCGTCCGCTTCGCCATCGGTGCCGTCGGAAACTCGGCCCGTCTGAC
GACGTTGCCGGATCAGAGCACCCGCGTCATCTTGGCCAAGCCGCCGCTCGGCGCCTCTTCCGGCATGCACTGCTT
CCTGTGGCTTCCCGGCATGAGGCCTGGCCAGTCACACCCCTTCACCATAGCCGGCCTCAACCCCCCGGAGCTGAT
CGTCGCCCCCGCCGGCGGCTTCGCTCGCGTCCTGCACGGTTATGCCGACGCCAACGCCGGCAACTCCGTCTTGGC
CGCCGTCGAGGGCCCTTACGGCGCCGGCCCGTCTCCGGCCGCTTACTCGTCCGTCGTCTTCATCGCCGGAGGCAG
CGGCATCACCTTCACCCTCGGCAGCGCTCTCGATATGCTTCGCACCGACCAGAACCAGCGGGTGCTCTTCGTCTG
GATCGTCAAAACGACGGCCAGCTTCGACAGCCTCCGCCACCGTCTCGCCACGCTCCGCGATGACCCGCGCGTCAC
CCTCCGGCTCTTCGTGACCCGGCCGCCTCCGACGCCGGCCACGCCAGCAACGCCCGCCTCGATCCATGAGCCCGT
CGAGCTCCTGACGCTGTCCCTGCCCACGACGCACAGCTCGGCCGATTCGGACCAAGATTTGGATCCGGAGAAGGC
CTGGTCTGGCCCGACGCTACGCTCCGACAAGTGGCAGCCGCCGTCCGACGTCCACGTCCAGACGACGCGCGTTCT
CACCAACCGGCCGTCCAACGTCAACGGCATTGCCATCGCCTACGAGCGGCCCAATGTCGCCTCCTTGATCCGCGC
CGCCATCGACGACACGCCGCCGGACCGTCGCGCCCTCGTCCTCGGCTGCGGGCCGGGCCCGTTGATGACCGTCGT
GCGGAATACAACGGCCTCCTGCATCCGGGGTGACGGCCCGGCCGTAGACCTTCACATCGAGAACTTTGCGTGGTG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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