© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5525 |
| Gene name | |
| Location | scaffold_454:9254..9988 |
| Strand | - |
| Gene length (bp) | 734 |
| Transcript length (bp) | 603 |
| Coding sequence length (bp) | 600 |
| Protein length (aa) | 200 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14273 | DUF4360 | Domain of unknown function (DUF4360) | 3.7E-42 | 27 | 200 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4ATM6|A7590_ARTBC | Uncharacterized secreted protein ARB_07590 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07590 PE=1 SV=1 | 24 | 200 | 2.0E-17 |
| sp|D4AV98|A0107_ARTBC | Uncharacterized secreted protein ARB_00107 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00107 PE=1 SV=1 | 36 | 200 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5525 MLFPILSIFLGLVAAVPQFNDFRPRRFMIHSISLIGSGCPEGSAHVQVDSTGTIFEASFSRYQIQSGPDVYASEL RKNCKLSLNMDYDPGYQFRLMGTDMSGFASIPHNVGGQCVNTFSFAGNGDSRIDYTVTFFGKLHGTFDLRSSPGL SSWSSCGRSSSILNLNTACELEDTNQRALIAVDEVSGKLTVKCALQWRRC |
| Coding | >Ophio5|5525 ATGCTTTTCCCAATTCTCAGCATCTTCCTTGGCTTGGTTGCCGCCGTTCCTCAGTTTAATGATTTCAGGCCTCGA AGGTTCATGATTCATAGTATCAGCCTCATCGGATCAGGTTGCCCTGAGGGTTCTGCACACGTGCAGGTTGATTCC ACCGGGACCATCTTTGAAGCCAGCTTCTCGAGATACCAGATCCAGTCCGGCCCAGATGTATATGCTTCCGAACTG CGCAAGAACTGCAAGCTCAGTCTCAACATGGATTATGATCCCGGCTACCAGTTCCGCCTCATGGGAACCGACATG TCTGGCTTCGCGTCGATCCCCCATAACGTTGGGGGGCAGTGTGTCAACACCTTTTCGTTCGCCGGAAACGGCGAT AGTCGCATCGACTATACCGTTACTTTCTTCGGCAAACTCCACGGTACATTTGACCTGAGGTCCAGCCCTGGACTC TCCAGCTGGTCTTCATGCGGAAGGAGCTCGTCCATTCTGAACCTCAACACGGCCTGCGAACTCGAGGATACTAAC CAACGGGCCTTGATCGCTGTCGACGAGGTAAGCGGCAAGCTTACGGTCAAGTGCGCTCTTCAGTGGAGGCGCTGT |
| Transcript | >Ophio5|5525 ATGCTTTTCCCAATTCTCAGCATCTTCCTTGGCTTGGTTGCCGCCGTTCCTCAGTTTAATGATTTCAGGCCTCGA AGGTTCATGATTCATAGTATCAGCCTCATCGGATCAGGTTGCCCTGAGGGTTCTGCACACGTGCAGGTTGATTCC ACCGGGACCATCTTTGAAGCCAGCTTCTCGAGATACCAGATCCAGTCCGGCCCAGATGTATATGCTTCCGAACTG CGCAAGAACTGCAAGCTCAGTCTCAACATGGATTATGATCCCGGCTACCAGTTCCGCCTCATGGGAACCGACATG TCTGGCTTCGCGTCGATCCCCCATAACGTTGGGGGGCAGTGTGTCAACACCTTTTCGTTCGCCGGAAACGGCGAT AGTCGCATCGACTATACCGTTACTTTCTTCGGCAAACTCCACGGTACATTTGACCTGAGGTCCAGCCCTGGACTC TCCAGCTGGTCTTCATGCGGAAGGAGCTCGTCCATTCTGAACCTCAACACGGCCTGCGAACTCGAGGATACTAAC CAACGGGCCTTGATCGCTGTCGACGAGGTAAGCGGCAAGCTTACGGTCAAGTGCGCTCTTCAGTGGAGGCGCTGT TAA |
| Gene | >Ophio5|5525 ATGCTTTTCCCAATTCTCAGCATCTTCCTTGGCTTGGTTGCCGCCGTTCCTCAGTTTAATGATTTCAGGCCTCGA AGGTTCATGATTCATAGTATCAGCCTCATCGGATCAGGTTGCCCTGAGGGTTCTGCACACGTGCAGGTTGATTCC ACCGGGACCATCTTTGAAGCCAGCTTCTCGAGATACCAGATCCAGTCCGGCCCAGATGTATATGCTTCCGAACTG CGCAAGAACTGCAAGCTCAGTCTCAACATGGATTATGATCCCGGCTACCAGTCAGTCGTACTATTTTTTATTTTT TTTTTGCTGCTCAAGTCATAAAATGCTCATAATCCCGACCTAGGTTCCGCCTCATGGGAACCGACATGTCTGGCT TCGCGTCGATCCCCCATAACGTTGGGGGGCAGTGTGTCAACACCTTTTCGTTCGCCGGAAACGGCGATAGTCGCA TCGACTATACCGTTACTTTCTTCGGCAAACTCCACGGTACATTTGACCTGAGGTCCAGCCCTGGACTCTCCAGCT GGTCTTCATGCGGAAGGAGCTCGTCCATTCTGAACCTCAACACGGCCTGCGAACTCGAGGATACTAACCAACGGG CCTTGATCGCTGTAAGTCATGCCCATGCCCGCCTTGCCCCAAGAATGAGCGTATACTAAGACAAATCTATCTAGG TCGACGAGGTAAGCGGCAAGCTTACGGTCAAGTGCGCTCTTCAGTGGAGGCGCTGTTAA |