Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5507
Gene name
Locationscaffold_451:7819..9733
Strand-
Gene length (bp)1914
Transcript length (bp)1641
Coding sequence length (bp)1638
Protein length (aa) 546

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 55 77 22
3 97 119 22
4 132 154 22
5 182 204 22
6 216 238 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5507
MDLSDFIRPGVDLRQDHGPALVATCAVFLPLTWLAVGLRTYARAILTRNFQIDDWFMLIAQLTFTLECAFVIAGV
SRGLGKHNAALSIPDLVAALMWQSIATTIYILDMMFVKLSIGIFLLRLSNVWAVYKWILWISLIIVTLWSIGLFL
WDIFQCIPVQKQWDFRIQHGTCASPKAIVDSVIALTVLTVSSDWLYALLPIPMVWNVKMTRQAKATVIVILGLGI
FASIATLVRLRFLDGLRRIDDLSYTASDTLIWSLIEPGVAIFASSMATIRPLLRFCKIKGFTTQFTKNGTVADKS
EAQQDPGHDQGKKPGPDGQGLQAFNISEISLNSPGGAMVNGSGQQDSPSFLNNDRRQATPLEVCKQRAQDRKNSV
KKGTWAAYGISDISLDSIEMEDEGEEIEITRTMTNFGSLSLENFGSSPRGGQLVPTESRPLSHSKSDTFVIEDHR
RTWTWQHPPLSTSPLADDVDLEAQSPNKGKARDYGVEEEEEGEEKEEEEEGEKRGGNAAVRDGMQGRFGEEEEEE
EEEEDEDDDERIWDEVRRRWC
Coding >Ophio5|5507
ATGGATCTGTCAGACTTCATCCGGCCGGGTGTCGATCTGAGGCAGGATCATGGGCCCGCCTTGGTCGCGACATGC
GCCGTCTTCCTGCCGCTGACATGGCTCGCCGTCGGGTTGCGTACTTACGCGAGGGCCATATTAACGAGGAACTTT
CAAATCGACGACTGGTTCATGTTGATTGCTCAGCTCACATTCACCTTGGAGTGTGCCTTTGTCATCGCTGGCGTC
AGCAGGGGACTGGGCAAGCACAACGCGGCCCTCTCGATTCCCGATCTGGTCGCGGCCCTCATGTGGCAATCGATC
GCGACGACTATCTACATCCTCGACATGATGTTCGTCAAACTCAGCATCGGCATCTTCCTCCTCCGGCTCAGCAAC
GTGTGGGCCGTCTACAAATGGATACTCTGGATCAGTCTCATCATCGTCACCCTCTGGAGCATCGGTCTTTTCCTG
TGGGACATCTTTCAGTGCATCCCGGTCCAGAAGCAGTGGGACTTTCGCATCCAGCATGGAACCTGCGCGTCTCCC
AAGGCCATTGTCGATTCCGTCATTGCTCTCACTGTTCTGACCGTCTCGTCCGATTGGCTCTACGCGCTCCTCCCG
ATTCCCATGGTCTGGAACGTCAAGATGACTCGGCAGGCCAAAGCGACCGTCATTGTCATTCTCGGCCTCGGCATT
TTTGCCAGTATCGCTACACTCGTCAGACTGAGATTTTTGGATGGGCTGAGGCGAATAGATGACTTGAGCTACACG
GCATCCGATACGCTGATTTGGTCCCTCATCGAACCGGGAGTGGCCATCTTCGCGTCAAGCATGGCCACGATTCGG
CCTCTGCTGCGCTTCTGCAAGATCAAGGGCTTTACAACGCAATTCACCAAGAACGGCACGGTGGCGGATAAGTCG
GAGGCGCAGCAGGACCCCGGCCATGACCAAGGCAAGAAGCCCGGGCCTGACGGACAGGGCTTGCAAGCATTCAAC
ATCAGCGAGATATCGCTCAACAGTCCTGGAGGCGCCATGGTAAACGGCTCGGGCCAGCAGGACTCGCCAAGCTTC
CTCAACAACGACAGGAGACAGGCGACGCCGCTCGAGGTGTGCAAGCAGCGGGCGCAGGATCGCAAGAACTCGGTC
AAGAAGGGGACCTGGGCCGCGTACGGCATCAGCGACATCTCGCTCGATAGCATCGAAATGGAAGACGAGGGCGAG
GAGATTGAGATAACCAGGACGATGACCAACTTCGGCAGCTTGTCGTTGGAGAACTTTGGCAGCAGTCCGAGAGGT
GGGCAGCTTGTGCCAACTGAGAGCAGGCCGCTGAGCCACTCCAAGAGCGATACCTTTGTCATCGAGGACCACAGA
AGGACATGGACGTGGCAGCATCCACCGCTATCGACGAGTCCACTCGCCGACGACGTGGATCTGGAGGCGCAGAGC
CCGAATAAGGGTAAAGCCAGGGACTATGGCGTGGAAGAGGAGGAGGAGGGGGAGGAGAAGGAGGAGGAGGAGGAG
GGGGAGAAGAGAGGCGGCAATGCGGCGGTACGGGATGGAATGCAGGGGAGGTTCGGAGAGGAGGAGGAGGAAGAG
GAGGAGGAGGAGGATGAAGACGATGACGAACGTATATGGGACGAGGTGAGGCGGAGATGGTGT
Transcript >Ophio5|5507
ATGGATCTGTCAGACTTCATCCGGCCGGGTGTCGATCTGAGGCAGGATCATGGGCCCGCCTTGGTCGCGACATGC
GCCGTCTTCCTGCCGCTGACATGGCTCGCCGTCGGGTTGCGTACTTACGCGAGGGCCATATTAACGAGGAACTTT
CAAATCGACGACTGGTTCATGTTGATTGCTCAGCTCACATTCACCTTGGAGTGTGCCTTTGTCATCGCTGGCGTC
AGCAGGGGACTGGGCAAGCACAACGCGGCCCTCTCGATTCCCGATCTGGTCGCGGCCCTCATGTGGCAATCGATC
GCGACGACTATCTACATCCTCGACATGATGTTCGTCAAACTCAGCATCGGCATCTTCCTCCTCCGGCTCAGCAAC
GTGTGGGCCGTCTACAAATGGATACTCTGGATCAGTCTCATCATCGTCACCCTCTGGAGCATCGGTCTTTTCCTG
TGGGACATCTTTCAGTGCATCCCGGTCCAGAAGCAGTGGGACTTTCGCATCCAGCATGGAACCTGCGCGTCTCCC
AAGGCCATTGTCGATTCCGTCATTGCTCTCACTGTTCTGACCGTCTCGTCCGATTGGCTCTACGCGCTCCTCCCG
ATTCCCATGGTCTGGAACGTCAAGATGACTCGGCAGGCCAAAGCGACCGTCATTGTCATTCTCGGCCTCGGCATT
TTTGCCAGTATCGCTACACTCGTCAGACTGAGATTTTTGGATGGGCTGAGGCGAATAGATGACTTGAGCTACACG
GCATCCGATACGCTGATTTGGTCCCTCATCGAACCGGGAGTGGCCATCTTCGCGTCAAGCATGGCCACGATTCGG
CCTCTGCTGCGCTTCTGCAAGATCAAGGGCTTTACAACGCAATTCACCAAGAACGGCACGGTGGCGGATAAGTCG
GAGGCGCAGCAGGACCCCGGCCATGACCAAGGCAAGAAGCCCGGGCCTGACGGACAGGGCTTGCAAGCATTCAAC
ATCAGCGAGATATCGCTCAACAGTCCTGGAGGCGCCATGGTAAACGGCTCGGGCCAGCAGGACTCGCCAAGCTTC
CTCAACAACGACAGGAGACAGGCGACGCCGCTCGAGGTGTGCAAGCAGCGGGCGCAGGATCGCAAGAACTCGGTC
AAGAAGGGGACCTGGGCCGCGTACGGCATCAGCGACATCTCGCTCGATAGCATCGAAATGGAAGACGAGGGCGAG
GAGATTGAGATAACCAGGACGATGACCAACTTCGGCAGCTTGTCGTTGGAGAACTTTGGCAGCAGTCCGAGAGGT
GGGCAGCTTGTGCCAACTGAGAGCAGGCCGCTGAGCCACTCCAAGAGCGATACCTTTGTCATCGAGGACCACAGA
AGGACATGGACGTGGCAGCATCCACCGCTATCGACGAGTCCACTCGCCGACGACGTGGATCTGGAGGCGCAGAGC
CCGAATAAGGGTAAAGCCAGGGACTATGGCGTGGAAGAGGAGGAGGAGGGGGAGGAGAAGGAGGAGGAGGAGGAG
GGGGAGAAGAGAGGCGGCAATGCGGCGGTACGGGATGGAATGCAGGGGAGGTTCGGAGAGGAGGAGGAGGAAGAG
GAGGAGGAGGAGGATGAAGACGATGACGAACGTATATGGGACGAGGTGAGGCGGAGATGGTGTTGA
Gene >Ophio5|5507
ATGGATCTGTCAGACTTCATCCGGCCGGGTGTCGATCTGAGGCAGGATCATGGGCCCGCCTTGGTCGCGACATGC
GCCGTCTTCCTGCCGCTGACATGGCTCGCCGTCGGGTTGCGTACTTACGCGAGGGCCATATTAACGAGGAACTTT
CAAATCGACGACTGGTTCATGTTGATTGCTCAGGTTGGCACCCTCCCTTGCAATCACCGAGAAAAGCTGACCGTG
GCCTCGGCAGCTCACATTCACCTTGGAGTGTGCCTTTGTCATCGCTGGCGTCAGCAGGGGACTGGGCAAGCACAA
CGCGGCCCTCTCGATTCCCGATCTGGTCGCGGCCCTCATGGTGCGTGCTACGGCGGCCCCTTGCTTTTGATGATG
GCTCACGCCCGGTGCAGTGGCAATCGATCGCGACGACTATCTACATCCTCGACATGATGTTCGTCAAACTCAGCA
TCGGCATCTTCCTCCTCCGGCTCAGCAACGTGTGGGCCGTCTACAAATGGATACTCTGGATCAGTCTCATCATCG
TCACCCTCTGGAGCATCGGTCTTTTCCTGTGGGACATCTTTCAGTGCATCCCGGTCCAGAAGCAGTGGGACTTTC
GCATCCAGCATGGAACCTGCGCGTCTCCCAAGGCCATTGTCGATTCCGTCATTGCTCTCACTGTTCTGACCGTCT
CGTCCGATTGGCTCTACGTGAGCATCTTCCATGTTGCCCCACGGGCCATCAGAGTGGCTGACGGACATTTTGTTC
TGGCGCAGGCGCTCCTCCCGATTCCCATGGTCTGGAACGTCAAGATGACTCGGCAGGCCAAAGCGACCGTCATTG
TCATTCTCGGCCTCGGCATTTTGTATGAGTGCTCTTGGCCGCGCAGCTCATCTCCAAGGCTGACTCGTTACTAGT
GCCAGTATCGCTACACTCGTCAGACTGAGATTTTTGGATGGGCTGAGGCGAATAGATGACTTGAGCTGTGAGTAC
GGCGCGGAGATGACGAGGCATTCCGACATCTAACCAAGTTCAGACACGGCATCCGATACGCTGATTTGGTCCCTC
ATCGAACCGGGAGTGGCCATCTTCGCGTCAAGCATGGCCACGATTCGGCCTCTGCTGCGCTTCTGCAAGATCAAG
GGCTTTACAACGCAATTCACCAAGAACGGCACGGTGGCGGATAAGTCGGAGGCGCAGCAGGACCCCGGCCATGAC
CAAGGCAAGAAGCCCGGGCCTGACGGACAGGGCTTGCAAGCATTCAACATCAGCGAGATATCGCTCAACAGTCCT
GGAGGCGCCATGGTAAACGGCTCGGGCCAGCAGGACTCGCCAAGCTTCCTCAACAACGACAGGAGACAGGCGACG
CCGCTCGAGGTGTGCAAGCAGCGGGCGCAGGATCGCAAGAACTCGGTCAAGAAGGGGACCTGGGCCGCGTACGGC
ATCAGCGACATCTCGCTCGATAGCATCGAAATGGAAGACGAGGGCGAGGAGATTGAGATAACCAGGACGATGACC
AACTTCGGCAGCTTGTCGTTGGAGAACTTTGGCAGCAGTCCGAGAGGTGGGCAGCTTGTGCCAACTGAGAGCAGG
CCGCTGAGCCACTCCAAGAGCGATACCTTTGTCATCGAGGACCACAGAAGGACATGGACGTGGCAGCATCCACCG
CTATCGACGAGTCCACTCGCCGACGACGTGGATCTGGAGGCGCAGAGCCCGAATAAGGGTAAAGCCAGGGACTAT
GGCGTGGAAGAGGAGGAGGAGGGGGAGGAGAAGGAGGAGGAGGAGGAGGGGGAGAAGAGAGGCGGCAATGCGGCG
GTACGGGATGGAATGCAGGGGAGGTTCGGAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGATGAAGACGATGAC
GAACGTATATGGGACGAGGTGAGGCGGAGATGGTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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