Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5483
Gene name
Locationscaffold_45:16871..19255
Strand+
Gene length (bp)2384
Transcript length (bp)2196
Coding sequence length (bp)2193
Protein length (aa) 731

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07885 Ion_trans_2 Ion channel 9.1E-16 216 288
PF07885 Ion_trans_2 Ion channel 5.8E-17 377 454

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P40310|TOK1_YEAST Outward-rectifier potassium channel TOK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOK1 PE=1 SV=1 3 486 3.0E-56
sp|O17185|SUP9_CAEEL Two pore potassium channel protein sup-9 OS=Caenorhabditis elegans GN=sup-9 PE=1 SV=2 233 454 1.0E-08
sp|O17185|SUP9_CAEEL Two pore potassium channel protein sup-9 OS=Caenorhabditis elegans GN=sup-9 PE=1 SV=2 224 350 7.0E-07
sp|Q58752|MJK2_METJA Probable potassium channel protein 2 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1357 PE=3 SV=1 205 290 9.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.5

Transmembrane Domains

Domain # Start End Length
1 94 116 22
2 129 151 22
3 171 193 22
4 206 228 22
5 265 287 22
6 369 391 22
7 401 423 22
8 430 449 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5483
MDDSPSNDASDPLARVATSLLRPEFPLEARFQNDDAHLIPSRLWFASSAFPMVAGTLGPVASAFSICALVRQWRQ
HVPPRTDLNAATFLPDPPWLLIINAIQLAVALLANLMLLLNMGKKVRFTIAQPITIVGWYISSILLIACTAAASG
PLRHGLKPPNEYVWSQAFYYGIWAAILYFIVASLMAVTFWGAWSNHYDKDFNLTNSQRTLMLQTIAVLAYLLIGA
LIFSKIEDWPYLDAVYWADVTLFTIGFGDFAPKTQLGRGLLIPYALVGIISVGLVISSISSLMLERGSRRLDARM
EEKRRRKVITAMTRKGDDEILTPLPPAPLVANDDFRVDDPLFDEFDRRRCEFDLMRMIQATASSRRRWMAMAVSF
SIWVILWLVGAVIFFACEWSYQHWTYFEAFYYCFISLLTIGYGDLHVVSNAGRSFFVFWSLLALPTMTVLISNAG
DTVVKLIRDYTNYLGNLTILPGDESFGRTIKRIVNGLSCGRLFKSVGGGAPEPERSERVDEKTAATDHAWGEMQA
TTNNTAASPSLSRELTAVRNSTGILLPTNTAERRSINRVHEILGDLPTGNDLHLLLISEIQNVAKHLREDEPRRY
SFEEWAWYLGLIGEDERRPEMHRKAIPKEKRKHAYHRHHAHKHKHGRHHHHNQQEPTATTVVDDEGVEDDLVKWS
WVGKYSPLVGGQEETEWILERLMMSLHESLWKARVANDGDSTDTAAAAAAAAAAST
Coding >Ophio5|5483
ATGGATGATAGCCCGTCAAACGACGCTTCCGACCCCTTGGCCCGTGTCGCCACCTCGCTACTCCGGCCTGAATTT
CCTCTCGAGGCTCGCTTTCAAAATGACGATGCCCATCTCATCCCAAGCCGGCTTTGGTTTGCCTCGTCAGCCTTT
CCCATGGTCGCCGGTACCTTGGGGCCCGTCGCCTCGGCCTTCAGTATTTGCGCCCTTGTGCGTCAATGGAGGCAG
CATGTCCCGCCCCGTACCGACCTCAACGCCGCCACCTTTCTTCCCGACCCTCCCTGGCTTCTCATTATCAACGCC
ATCCAGTTGGCCGTCGCCCTACTTGCCAACCTGATGCTGCTTCTCAACATGGGCAAGAAGGTGCGCTTCACCATT
GCGCAACCCATCACCATCGTCGGCTGGTACATCTCCTCCATCCTCCTCATCGCCTGTACTGCCGCAGCCAGTGGC
CCCTTGCGGCACGGCCTGAAGCCCCCCAACGAATACGTCTGGTCCCAGGCCTTCTACTACGGCATCTGGGCCGCA
ATCCTCTACTTCATCGTCGCCTCCCTCATGGCCGTGACCTTTTGGGGCGCCTGGTCGAACCACTACGACAAGGAC
TTCAACCTCACTAACAGTCAGCGTACCCTGATGCTGCAGACCATCGCCGTGCTGGCCTACCTGCTCATTGGCGCC
CTCATCTTCTCCAAGATCGAGGACTGGCCCTACCTCGACGCCGTCTACTGGGCCGACGTGACGCTCTTCACCATA
GGCTTTGGAGACTTTGCGCCTAAGACGCAGCTCGGCCGCGGCTTGCTGATCCCGTATGCCCTCGTCGGCATTATC
AGCGTCGGTCTCGTCATCAGCTCCATCAGCAGCCTGATGCTCGAGCGTGGCAGCCGTCGGCTCGATGCCCGTATG
GAGGAAAAGCGCCGGCGGAAAGTCATTACCGCCATGACTCGCAAGGGCGACGACGAGATCCTGACCCCCCTGCCT
CCGGCCCCCCTGGTGGCCAACGACGACTTCCGGGTCGACGACCCCCTGTTCGACGAATTCGACCGCCGCCGCTGC
GAGTTCGACCTGATGCGCATGATTCAGGCGACGGCCTCGTCGCGAAGACGCTGGATGGCCATGGCCGTCTCCTTT
AGCATTTGGGTCATCCTCTGGCTCGTCGGCGCCGTCATCTTCTTCGCTTGCGAATGGTCCTACCAGCACTGGACC
TACTTCGAGGCCTTTTACTACTGCTTCATATCGCTGCTGACCATCGGCTACGGCGACCTACACGTCGTATCCAAT
GCCGGCCGGTCCTTTTTCGTCTTCTGGTCGCTCCTGGCCCTGCCGACCATGACGGTGCTCATCTCCAACGCCGGA
GACACCGTCGTCAAGCTCATCCGCGACTACACAAACTACCTCGGAAACCTGACCATCTTGCCCGGCGACGAGAGC
TTCGGCCGGACCATCAAGCGCATCGTCAACGGCCTCAGCTGCGGCCGTCTCTTCAAGAGCGTAGGCGGCGGTGCG
CCGGAGCCGGAGCGGTCGGAGCGGGTCGACGAGAAGACGGCGGCGACGGACCACGCCTGGGGCGAGATGCAGGCG
ACGACCAACAACACGGCCGCCAGTCCCAGCCTCTCGCGCGAGCTTACGGCCGTCCGCAACAGCACCGGCATCCTG
CTCCCCACCAACACGGCCGAGCGCCGCTCCATCAACCGCGTGCACGAGATCCTCGGCGACCTGCCGACCGGCAAC
GACCTCCACCTCCTGCTCATCTCCGAGATACAAAACGTGGCCAAGCACCTGCGCGAGGACGAGCCCCGGCGCTAC
TCGTTCGAGGAATGGGCCTGGTACCTCGGCCTCATCGGCGAGGACGAACGCAGGCCGGAGATGCACCGCAAGGCG
ATTCCCAAGGAGAAGCGCAAGCATGCCTATCACCGGCACCACGCACACAAGCACAAGCACGGCAGACATCACCAC
CACAACCAGCAGGAGCCCACGGCGACGACGGTCGTCGACGACGAAGGCGTCGAGGACGACCTCGTCAAGTGGTCG
TGGGTCGGCAAGTACAGCCCCCTCGTGGGCGGCCAGGAGGAGACGGAGTGGATCCTCGAGAGGCTGATGATGAGC
CTACACGAGTCGCTGTGGAAGGCGAGGGTCGCCAACGATGGCGACTCGACCGACACGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGTCGACA
Transcript >Ophio5|5483
ATGGATGATAGCCCGTCAAACGACGCTTCCGACCCCTTGGCCCGTGTCGCCACCTCGCTACTCCGGCCTGAATTT
CCTCTCGAGGCTCGCTTTCAAAATGACGATGCCCATCTCATCCCAAGCCGGCTTTGGTTTGCCTCGTCAGCCTTT
CCCATGGTCGCCGGTACCTTGGGGCCCGTCGCCTCGGCCTTCAGTATTTGCGCCCTTGTGCGTCAATGGAGGCAG
CATGTCCCGCCCCGTACCGACCTCAACGCCGCCACCTTTCTTCCCGACCCTCCCTGGCTTCTCATTATCAACGCC
ATCCAGTTGGCCGTCGCCCTACTTGCCAACCTGATGCTGCTTCTCAACATGGGCAAGAAGGTGCGCTTCACCATT
GCGCAACCCATCACCATCGTCGGCTGGTACATCTCCTCCATCCTCCTCATCGCCTGTACTGCCGCAGCCAGTGGC
CCCTTGCGGCACGGCCTGAAGCCCCCCAACGAATACGTCTGGTCCCAGGCCTTCTACTACGGCATCTGGGCCGCA
ATCCTCTACTTCATCGTCGCCTCCCTCATGGCCGTGACCTTTTGGGGCGCCTGGTCGAACCACTACGACAAGGAC
TTCAACCTCACTAACAGTCAGCGTACCCTGATGCTGCAGACCATCGCCGTGCTGGCCTACCTGCTCATTGGCGCC
CTCATCTTCTCCAAGATCGAGGACTGGCCCTACCTCGACGCCGTCTACTGGGCCGACGTGACGCTCTTCACCATA
GGCTTTGGAGACTTTGCGCCTAAGACGCAGCTCGGCCGCGGCTTGCTGATCCCGTATGCCCTCGTCGGCATTATC
AGCGTCGGTCTCGTCATCAGCTCCATCAGCAGCCTGATGCTCGAGCGTGGCAGCCGTCGGCTCGATGCCCGTATG
GAGGAAAAGCGCCGGCGGAAAGTCATTACCGCCATGACTCGCAAGGGCGACGACGAGATCCTGACCCCCCTGCCT
CCGGCCCCCCTGGTGGCCAACGACGACTTCCGGGTCGACGACCCCCTGTTCGACGAATTCGACCGCCGCCGCTGC
GAGTTCGACCTGATGCGCATGATTCAGGCGACGGCCTCGTCGCGAAGACGCTGGATGGCCATGGCCGTCTCCTTT
AGCATTTGGGTCATCCTCTGGCTCGTCGGCGCCGTCATCTTCTTCGCTTGCGAATGGTCCTACCAGCACTGGACC
TACTTCGAGGCCTTTTACTACTGCTTCATATCGCTGCTGACCATCGGCTACGGCGACCTACACGTCGTATCCAAT
GCCGGCCGGTCCTTTTTCGTCTTCTGGTCGCTCCTGGCCCTGCCGACCATGACGGTGCTCATCTCCAACGCCGGA
GACACCGTCGTCAAGCTCATCCGCGACTACACAAACTACCTCGGAAACCTGACCATCTTGCCCGGCGACGAGAGC
TTCGGCCGGACCATCAAGCGCATCGTCAACGGCCTCAGCTGCGGCCGTCTCTTCAAGAGCGTAGGCGGCGGTGCG
CCGGAGCCGGAGCGGTCGGAGCGGGTCGACGAGAAGACGGCGGCGACGGACCACGCCTGGGGCGAGATGCAGGCG
ACGACCAACAACACGGCCGCCAGTCCCAGCCTCTCGCGCGAGCTTACGGCCGTCCGCAACAGCACCGGCATCCTG
CTCCCCACCAACACGGCCGAGCGCCGCTCCATCAACCGCGTGCACGAGATCCTCGGCGACCTGCCGACCGGCAAC
GACCTCCACCTCCTGCTCATCTCCGAGATACAAAACGTGGCCAAGCACCTGCGCGAGGACGAGCCCCGGCGCTAC
TCGTTCGAGGAATGGGCCTGGTACCTCGGCCTCATCGGCGAGGACGAACGCAGGCCGGAGATGCACCGCAAGGCG
ATTCCCAAGGAGAAGCGCAAGCATGCCTATCACCGGCACCACGCACACAAGCACAAGCACGGCAGACATCACCAC
CACAACCAGCAGGAGCCCACGGCGACGACGGTCGTCGACGACGAAGGCGTCGAGGACGACCTCGTCAAGTGGTCG
TGGGTCGGCAAGTACAGCCCCCTCGTGGGCGGCCAGGAGGAGACGGAGTGGATCCTCGAGAGGCTGATGATGAGC
CTACACGAGTCGCTGTGGAAGGCGAGGGTCGCCAACGATGGCGACTCGACCGACACGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGTCGACATGA
Gene >Ophio5|5483
ATGGATGATAGCCCGTCAAACGACGCTTCCGACCCCTTGGCCCGTGTCGCCACCTCGCTACTCCGGCCTGAATTT
CCTCTCGAGGCTCGCTTTCAAAATGACGATGCCCATCTCATCCCAAGGTTCGTCGTCCAGAGCCGTCATTCCGAT
CCTCCAAGTCTTCGACTGACATGGCTGCCGCCAGCCGGCTTTGGTTTGCCTCGTCAGCCTTTCCCATGGTCGCCG
GTACCTTGGGGCCCGTCGCCTCGGCCTTCAGTATTTGCGCCCTTGTGCGTCAATGGAGGCAGCATGTCCCGCCCC
GTACCGACCTCAACGCCGCCACCTTTCTTCCCGACCCTCCCTGGTGAGAGCCGCGTCAGGCCGTCTTCTATGATT
TGCGCCGCTGCTGACCTTATGCTCCAAAGGCTTCTCATTATCAACGCCATCCAGTTGGCCGTCGCCCTACTTGCC
AACCTGATGCTGCTTCTCAACATGGGCAAGAAGGTGCGCTTCACCATTGCGCAACCCATCACCATCGTCGGCTGG
TAGGCTGCACCCTGAGAGCCGCCAGAGAGCCTCCCCTCCCCTGATGCTAAGCTGGTATTCGCAGGTACATCTCCT
CCATCCTCCTCATCGCCTGTACTGCCGCAGCCAGTGGCCCCTTGCGGCACGGCCTGAAGCCCCCCAACGAATACG
TCTGGTCCCAGGCCTTCTACTACGGCATCTGGGCCGCAATCCTCTACTTCATCGTCGCCTCCCTCATGGCCGTGA
CCTTTTGGGGCGCCTGGTCGAACCACTACGACAAGGACTTCAACCTCACTAACAGTCAGCGTACCCTGATGCTGC
AGACCATCGCCGTGCTGGCCTACCTGCTCATTGGCGCCCTCATCTTCTCCAAGATCGAGGACTGGCCCTACCTCG
ACGCCGTCTACTGGGCCGACGTGACGCTCTTCACCATAGGCTTTGGAGACTTTGCGCCTAAGACGCAGCTCGGCC
GCGGCTTGCTGATCCCGTATGCCCTCGTCGGCATTATCAGCGTCGGTCTCGTCATCAGCTCCATCAGCAGCCTGA
TGCTCGAGCGTGGCAGCCGTCGGCTCGATGCCCGTATGGAGGAAAAGCGCCGGCGGAAAGTCATTACCGCCATGA
CTCGCAAGGGCGACGACGAGATCCTGACCCCCCTGCCTCCGGCCCCCCTGGTGGCCAACGACGACTTCCGGGTCG
ACGACCCCCTGTTCGACGAATTCGACCGCCGCCGCTGCGAGTTCGACCTGATGCGCATGATTCAGGCGACGGCCT
CGTCGCGAAGACGCTGGATGGCCATGGCCGTCTCCTTTAGCATTTGGGTCATCCTCTGGCTCGTCGGCGCCGTCA
TCTTCTTCGCTTGCGAATGGTCCTACCAGCACTGGACCTACTTCGAGGCCTTTTACTACTGCTTCATATCGCTGC
TGACCATCGGCTACGGCGACCTACACGTCGTATCCAATGCCGGCCGGTCCTTTTTCGTCTTCTGGTCGCTCCTGG
CCCTGCCGACCATGACGGTGCTCATCTCCAACGCCGGAGACACCGTCGTCAAGCTCATCCGCGACTACACAAACT
ACCTCGGAAACCTGACCATCTTGCCCGGCGACGAGAGCTTCGGCCGGACCATCAAGCGCATCGTCAACGGCCTCA
GCTGCGGCCGTCTCTTCAAGAGCGTAGGCGGCGGTGCGCCGGAGCCGGAGCGGTCGGAGCGGGTCGACGAGAAGA
CGGCGGCGACGGACCACGCCTGGGGCGAGATGCAGGCGACGACCAACAACACGGCCGCCAGTCCCAGCCTCTCGC
GCGAGCTTACGGCCGTCCGCAACAGCACCGGCATCCTGCTCCCCACCAACACGGCCGAGCGCCGCTCCATCAACC
GCGTGCACGAGATCCTCGGCGACCTGCCGACCGGCAACGACCTCCACCTCCTGCTCATCTCCGAGATACAAAACG
TGGCCAAGCACCTGCGCGAGGACGAGCCCCGGCGCTACTCGTTCGAGGAATGGGCCTGGTACCTCGGCCTCATCG
GCGAGGACGAACGCAGGCCGGAGATGCACCGCAAGGCGATTCCCAAGGAGAAGCGCAAGCATGCCTATCACCGGC
ACCACGCACACAAGCACAAGCACGGCAGACATCACCACCACAACCAGCAGGAGCCCACGGCGACGACGGTCGTCG
ACGACGAAGGCGTCGAGGACGACCTCGTCAAGTGGTCGTGGGTCGGCAAGTACAGCCCCCTCGTGGGCGGCCAGG
AGGAGACGGAGTGGATCCTCGAGAGGCTGATGATGAGCCTACACGAGTCGCTGTGGAAGGCGAGGGTCGCCAACG
ATGGCGACTCGACCGACACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTCGACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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