Protein ID | Ophio5|5483 |
Gene name | |
Location | scaffold_45:16871..19255 |
Strand | + |
Gene length (bp) | 2384 |
Transcript length (bp) | 2196 |
Coding sequence length (bp) | 2193 |
Protein length (aa) | 731 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07885 | Ion_trans_2 | Ion channel | 9.1E-16 | 216 | 288 |
PF07885 | Ion_trans_2 | Ion channel | 5.8E-17 | 377 | 454 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P40310|TOK1_YEAST | Outward-rectifier potassium channel TOK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOK1 PE=1 SV=1 | 3 | 486 | 3.0E-56 |
sp|O17185|SUP9_CAEEL | Two pore potassium channel protein sup-9 OS=Caenorhabditis elegans GN=sup-9 PE=1 SV=2 | 233 | 454 | 1.0E-08 |
sp|O17185|SUP9_CAEEL | Two pore potassium channel protein sup-9 OS=Caenorhabditis elegans GN=sup-9 PE=1 SV=2 | 224 | 350 | 7.0E-07 |
sp|Q58752|MJK2_METJA | Probable potassium channel protein 2 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1357 PE=3 SV=1 | 205 | 290 | 9.0E-07 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 63 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 94 | 116 | 22 |
2 | 129 | 151 | 22 |
3 | 171 | 193 | 22 |
4 | 206 | 228 | 22 |
5 | 265 | 287 | 22 |
6 | 369 | 391 | 22 |
7 | 401 | 423 | 22 |
8 | 430 | 449 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5483 MDDSPSNDASDPLARVATSLLRPEFPLEARFQNDDAHLIPSRLWFASSAFPMVAGTLGPVASAFSICALVRQWRQ HVPPRTDLNAATFLPDPPWLLIINAIQLAVALLANLMLLLNMGKKVRFTIAQPITIVGWYISSILLIACTAAASG PLRHGLKPPNEYVWSQAFYYGIWAAILYFIVASLMAVTFWGAWSNHYDKDFNLTNSQRTLMLQTIAVLAYLLIGA LIFSKIEDWPYLDAVYWADVTLFTIGFGDFAPKTQLGRGLLIPYALVGIISVGLVISSISSLMLERGSRRLDARM EEKRRRKVITAMTRKGDDEILTPLPPAPLVANDDFRVDDPLFDEFDRRRCEFDLMRMIQATASSRRRWMAMAVSF SIWVILWLVGAVIFFACEWSYQHWTYFEAFYYCFISLLTIGYGDLHVVSNAGRSFFVFWSLLALPTMTVLISNAG DTVVKLIRDYTNYLGNLTILPGDESFGRTIKRIVNGLSCGRLFKSVGGGAPEPERSERVDEKTAATDHAWGEMQA TTNNTAASPSLSRELTAVRNSTGILLPTNTAERRSINRVHEILGDLPTGNDLHLLLISEIQNVAKHLREDEPRRY SFEEWAWYLGLIGEDERRPEMHRKAIPKEKRKHAYHRHHAHKHKHGRHHHHNQQEPTATTVVDDEGVEDDLVKWS WVGKYSPLVGGQEETEWILERLMMSLHESLWKARVANDGDSTDTAAAAAAAAAAST |
Coding | >Ophio5|5483 ATGGATGATAGCCCGTCAAACGACGCTTCCGACCCCTTGGCCCGTGTCGCCACCTCGCTACTCCGGCCTGAATTT CCTCTCGAGGCTCGCTTTCAAAATGACGATGCCCATCTCATCCCAAGCCGGCTTTGGTTTGCCTCGTCAGCCTTT CCCATGGTCGCCGGTACCTTGGGGCCCGTCGCCTCGGCCTTCAGTATTTGCGCCCTTGTGCGTCAATGGAGGCAG CATGTCCCGCCCCGTACCGACCTCAACGCCGCCACCTTTCTTCCCGACCCTCCCTGGCTTCTCATTATCAACGCC ATCCAGTTGGCCGTCGCCCTACTTGCCAACCTGATGCTGCTTCTCAACATGGGCAAGAAGGTGCGCTTCACCATT GCGCAACCCATCACCATCGTCGGCTGGTACATCTCCTCCATCCTCCTCATCGCCTGTACTGCCGCAGCCAGTGGC CCCTTGCGGCACGGCCTGAAGCCCCCCAACGAATACGTCTGGTCCCAGGCCTTCTACTACGGCATCTGGGCCGCA ATCCTCTACTTCATCGTCGCCTCCCTCATGGCCGTGACCTTTTGGGGCGCCTGGTCGAACCACTACGACAAGGAC TTCAACCTCACTAACAGTCAGCGTACCCTGATGCTGCAGACCATCGCCGTGCTGGCCTACCTGCTCATTGGCGCC CTCATCTTCTCCAAGATCGAGGACTGGCCCTACCTCGACGCCGTCTACTGGGCCGACGTGACGCTCTTCACCATA GGCTTTGGAGACTTTGCGCCTAAGACGCAGCTCGGCCGCGGCTTGCTGATCCCGTATGCCCTCGTCGGCATTATC AGCGTCGGTCTCGTCATCAGCTCCATCAGCAGCCTGATGCTCGAGCGTGGCAGCCGTCGGCTCGATGCCCGTATG GAGGAAAAGCGCCGGCGGAAAGTCATTACCGCCATGACTCGCAAGGGCGACGACGAGATCCTGACCCCCCTGCCT CCGGCCCCCCTGGTGGCCAACGACGACTTCCGGGTCGACGACCCCCTGTTCGACGAATTCGACCGCCGCCGCTGC GAGTTCGACCTGATGCGCATGATTCAGGCGACGGCCTCGTCGCGAAGACGCTGGATGGCCATGGCCGTCTCCTTT AGCATTTGGGTCATCCTCTGGCTCGTCGGCGCCGTCATCTTCTTCGCTTGCGAATGGTCCTACCAGCACTGGACC TACTTCGAGGCCTTTTACTACTGCTTCATATCGCTGCTGACCATCGGCTACGGCGACCTACACGTCGTATCCAAT GCCGGCCGGTCCTTTTTCGTCTTCTGGTCGCTCCTGGCCCTGCCGACCATGACGGTGCTCATCTCCAACGCCGGA GACACCGTCGTCAAGCTCATCCGCGACTACACAAACTACCTCGGAAACCTGACCATCTTGCCCGGCGACGAGAGC TTCGGCCGGACCATCAAGCGCATCGTCAACGGCCTCAGCTGCGGCCGTCTCTTCAAGAGCGTAGGCGGCGGTGCG CCGGAGCCGGAGCGGTCGGAGCGGGTCGACGAGAAGACGGCGGCGACGGACCACGCCTGGGGCGAGATGCAGGCG ACGACCAACAACACGGCCGCCAGTCCCAGCCTCTCGCGCGAGCTTACGGCCGTCCGCAACAGCACCGGCATCCTG CTCCCCACCAACACGGCCGAGCGCCGCTCCATCAACCGCGTGCACGAGATCCTCGGCGACCTGCCGACCGGCAAC GACCTCCACCTCCTGCTCATCTCCGAGATACAAAACGTGGCCAAGCACCTGCGCGAGGACGAGCCCCGGCGCTAC TCGTTCGAGGAATGGGCCTGGTACCTCGGCCTCATCGGCGAGGACGAACGCAGGCCGGAGATGCACCGCAAGGCG ATTCCCAAGGAGAAGCGCAAGCATGCCTATCACCGGCACCACGCACACAAGCACAAGCACGGCAGACATCACCAC CACAACCAGCAGGAGCCCACGGCGACGACGGTCGTCGACGACGAAGGCGTCGAGGACGACCTCGTCAAGTGGTCG TGGGTCGGCAAGTACAGCCCCCTCGTGGGCGGCCAGGAGGAGACGGAGTGGATCCTCGAGAGGCTGATGATGAGC CTACACGAGTCGCTGTGGAAGGCGAGGGTCGCCAACGATGGCGACTCGACCGACACGGCGGCGGCGGCGGCGGCG GCGGCGGCGGCGTCGACA |
Transcript | >Ophio5|5483 ATGGATGATAGCCCGTCAAACGACGCTTCCGACCCCTTGGCCCGTGTCGCCACCTCGCTACTCCGGCCTGAATTT CCTCTCGAGGCTCGCTTTCAAAATGACGATGCCCATCTCATCCCAAGCCGGCTTTGGTTTGCCTCGTCAGCCTTT CCCATGGTCGCCGGTACCTTGGGGCCCGTCGCCTCGGCCTTCAGTATTTGCGCCCTTGTGCGTCAATGGAGGCAG CATGTCCCGCCCCGTACCGACCTCAACGCCGCCACCTTTCTTCCCGACCCTCCCTGGCTTCTCATTATCAACGCC ATCCAGTTGGCCGTCGCCCTACTTGCCAACCTGATGCTGCTTCTCAACATGGGCAAGAAGGTGCGCTTCACCATT GCGCAACCCATCACCATCGTCGGCTGGTACATCTCCTCCATCCTCCTCATCGCCTGTACTGCCGCAGCCAGTGGC CCCTTGCGGCACGGCCTGAAGCCCCCCAACGAATACGTCTGGTCCCAGGCCTTCTACTACGGCATCTGGGCCGCA ATCCTCTACTTCATCGTCGCCTCCCTCATGGCCGTGACCTTTTGGGGCGCCTGGTCGAACCACTACGACAAGGAC TTCAACCTCACTAACAGTCAGCGTACCCTGATGCTGCAGACCATCGCCGTGCTGGCCTACCTGCTCATTGGCGCC CTCATCTTCTCCAAGATCGAGGACTGGCCCTACCTCGACGCCGTCTACTGGGCCGACGTGACGCTCTTCACCATA GGCTTTGGAGACTTTGCGCCTAAGACGCAGCTCGGCCGCGGCTTGCTGATCCCGTATGCCCTCGTCGGCATTATC AGCGTCGGTCTCGTCATCAGCTCCATCAGCAGCCTGATGCTCGAGCGTGGCAGCCGTCGGCTCGATGCCCGTATG GAGGAAAAGCGCCGGCGGAAAGTCATTACCGCCATGACTCGCAAGGGCGACGACGAGATCCTGACCCCCCTGCCT CCGGCCCCCCTGGTGGCCAACGACGACTTCCGGGTCGACGACCCCCTGTTCGACGAATTCGACCGCCGCCGCTGC GAGTTCGACCTGATGCGCATGATTCAGGCGACGGCCTCGTCGCGAAGACGCTGGATGGCCATGGCCGTCTCCTTT AGCATTTGGGTCATCCTCTGGCTCGTCGGCGCCGTCATCTTCTTCGCTTGCGAATGGTCCTACCAGCACTGGACC TACTTCGAGGCCTTTTACTACTGCTTCATATCGCTGCTGACCATCGGCTACGGCGACCTACACGTCGTATCCAAT GCCGGCCGGTCCTTTTTCGTCTTCTGGTCGCTCCTGGCCCTGCCGACCATGACGGTGCTCATCTCCAACGCCGGA GACACCGTCGTCAAGCTCATCCGCGACTACACAAACTACCTCGGAAACCTGACCATCTTGCCCGGCGACGAGAGC TTCGGCCGGACCATCAAGCGCATCGTCAACGGCCTCAGCTGCGGCCGTCTCTTCAAGAGCGTAGGCGGCGGTGCG CCGGAGCCGGAGCGGTCGGAGCGGGTCGACGAGAAGACGGCGGCGACGGACCACGCCTGGGGCGAGATGCAGGCG ACGACCAACAACACGGCCGCCAGTCCCAGCCTCTCGCGCGAGCTTACGGCCGTCCGCAACAGCACCGGCATCCTG CTCCCCACCAACACGGCCGAGCGCCGCTCCATCAACCGCGTGCACGAGATCCTCGGCGACCTGCCGACCGGCAAC GACCTCCACCTCCTGCTCATCTCCGAGATACAAAACGTGGCCAAGCACCTGCGCGAGGACGAGCCCCGGCGCTAC TCGTTCGAGGAATGGGCCTGGTACCTCGGCCTCATCGGCGAGGACGAACGCAGGCCGGAGATGCACCGCAAGGCG ATTCCCAAGGAGAAGCGCAAGCATGCCTATCACCGGCACCACGCACACAAGCACAAGCACGGCAGACATCACCAC CACAACCAGCAGGAGCCCACGGCGACGACGGTCGTCGACGACGAAGGCGTCGAGGACGACCTCGTCAAGTGGTCG TGGGTCGGCAAGTACAGCCCCCTCGTGGGCGGCCAGGAGGAGACGGAGTGGATCCTCGAGAGGCTGATGATGAGC CTACACGAGTCGCTGTGGAAGGCGAGGGTCGCCAACGATGGCGACTCGACCGACACGGCGGCGGCGGCGGCGGCG GCGGCGGCGGCGTCGACATGA |
Gene | >Ophio5|5483 ATGGATGATAGCCCGTCAAACGACGCTTCCGACCCCTTGGCCCGTGTCGCCACCTCGCTACTCCGGCCTGAATTT CCTCTCGAGGCTCGCTTTCAAAATGACGATGCCCATCTCATCCCAAGGTTCGTCGTCCAGAGCCGTCATTCCGAT CCTCCAAGTCTTCGACTGACATGGCTGCCGCCAGCCGGCTTTGGTTTGCCTCGTCAGCCTTTCCCATGGTCGCCG GTACCTTGGGGCCCGTCGCCTCGGCCTTCAGTATTTGCGCCCTTGTGCGTCAATGGAGGCAGCATGTCCCGCCCC GTACCGACCTCAACGCCGCCACCTTTCTTCCCGACCCTCCCTGGTGAGAGCCGCGTCAGGCCGTCTTCTATGATT TGCGCCGCTGCTGACCTTATGCTCCAAAGGCTTCTCATTATCAACGCCATCCAGTTGGCCGTCGCCCTACTTGCC AACCTGATGCTGCTTCTCAACATGGGCAAGAAGGTGCGCTTCACCATTGCGCAACCCATCACCATCGTCGGCTGG TAGGCTGCACCCTGAGAGCCGCCAGAGAGCCTCCCCTCCCCTGATGCTAAGCTGGTATTCGCAGGTACATCTCCT CCATCCTCCTCATCGCCTGTACTGCCGCAGCCAGTGGCCCCTTGCGGCACGGCCTGAAGCCCCCCAACGAATACG TCTGGTCCCAGGCCTTCTACTACGGCATCTGGGCCGCAATCCTCTACTTCATCGTCGCCTCCCTCATGGCCGTGA CCTTTTGGGGCGCCTGGTCGAACCACTACGACAAGGACTTCAACCTCACTAACAGTCAGCGTACCCTGATGCTGC AGACCATCGCCGTGCTGGCCTACCTGCTCATTGGCGCCCTCATCTTCTCCAAGATCGAGGACTGGCCCTACCTCG ACGCCGTCTACTGGGCCGACGTGACGCTCTTCACCATAGGCTTTGGAGACTTTGCGCCTAAGACGCAGCTCGGCC GCGGCTTGCTGATCCCGTATGCCCTCGTCGGCATTATCAGCGTCGGTCTCGTCATCAGCTCCATCAGCAGCCTGA TGCTCGAGCGTGGCAGCCGTCGGCTCGATGCCCGTATGGAGGAAAAGCGCCGGCGGAAAGTCATTACCGCCATGA CTCGCAAGGGCGACGACGAGATCCTGACCCCCCTGCCTCCGGCCCCCCTGGTGGCCAACGACGACTTCCGGGTCG ACGACCCCCTGTTCGACGAATTCGACCGCCGCCGCTGCGAGTTCGACCTGATGCGCATGATTCAGGCGACGGCCT CGTCGCGAAGACGCTGGATGGCCATGGCCGTCTCCTTTAGCATTTGGGTCATCCTCTGGCTCGTCGGCGCCGTCA TCTTCTTCGCTTGCGAATGGTCCTACCAGCACTGGACCTACTTCGAGGCCTTTTACTACTGCTTCATATCGCTGC TGACCATCGGCTACGGCGACCTACACGTCGTATCCAATGCCGGCCGGTCCTTTTTCGTCTTCTGGTCGCTCCTGG CCCTGCCGACCATGACGGTGCTCATCTCCAACGCCGGAGACACCGTCGTCAAGCTCATCCGCGACTACACAAACT ACCTCGGAAACCTGACCATCTTGCCCGGCGACGAGAGCTTCGGCCGGACCATCAAGCGCATCGTCAACGGCCTCA GCTGCGGCCGTCTCTTCAAGAGCGTAGGCGGCGGTGCGCCGGAGCCGGAGCGGTCGGAGCGGGTCGACGAGAAGA CGGCGGCGACGGACCACGCCTGGGGCGAGATGCAGGCGACGACCAACAACACGGCCGCCAGTCCCAGCCTCTCGC GCGAGCTTACGGCCGTCCGCAACAGCACCGGCATCCTGCTCCCCACCAACACGGCCGAGCGCCGCTCCATCAACC GCGTGCACGAGATCCTCGGCGACCTGCCGACCGGCAACGACCTCCACCTCCTGCTCATCTCCGAGATACAAAACG TGGCCAAGCACCTGCGCGAGGACGAGCCCCGGCGCTACTCGTTCGAGGAATGGGCCTGGTACCTCGGCCTCATCG GCGAGGACGAACGCAGGCCGGAGATGCACCGCAAGGCGATTCCCAAGGAGAAGCGCAAGCATGCCTATCACCGGC ACCACGCACACAAGCACAAGCACGGCAGACATCACCACCACAACCAGCAGGAGCCCACGGCGACGACGGTCGTCG ACGACGAAGGCGTCGAGGACGACCTCGTCAAGTGGTCGTGGGTCGGCAAGTACAGCCCCCTCGTGGGCGGCCAGG AGGAGACGGAGTGGATCCTCGAGAGGCTGATGATGAGCCTACACGAGTCGCTGTGGAAGGCGAGGGTCGCCAACG ATGGCGACTCGACCGACACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTCGACATGA |