Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5480
Gene name
Locationscaffold_45:12919..14020
Strand-
Gene length (bp)1101
Transcript length (bp)636
Coding sequence length (bp)633
Protein length (aa) 211

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 36 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5480
MSQALERPAAASLFLFPFLVLFHLPLPPPPQQVWAEPHLRLVSSSRYLWCFRPLQPTSTVSPPLVVGDRRVSRVT
SCIFHFGREYYLPHHHAWHTSRKKPVEQKPAQDAKPAGGEAATATPVTTPAVAPTGTKPAVPAPAVGHTLEADPV
KPVSKPETKPEVKSEAKPEEAAPVSTAADAAPTTSVNPAVGVSDTDKSKGEAAAVAPVPAA
Coding >Ophio5|5480
ATGTCGCAAGCACTCGAGAGGCCTGCTGCAGCCTCTCTCTTCCTTTTCCCTTTCCTCGTCCTCTTCCATCTTCCT
CTTCCGCCCCCTCCTCAGCAAGTCTGGGCAGAGCCTCATCTTCGTCTCGTCTCGTCGTCTCGTTACCTCTGGTGC
TTTCGTCCTTTGCAGCCTACCAGCACCGTCTCCCCGCCTCTCGTCGTGGGAGACCGTCGTGTTTCGCGCGTAACC
TCGTGCATATTTCACTTTGGTAGAGAATACTATCTCCCTCATCACCATGCCTGGCATACCTCCCGCAAGAAGCCT
GTCGAACAGAAGCCCGCCCAAGACGCCAAGCCCGCGGGGGGAGAGGCCGCTACGGCCACCCCCGTCACGACGCCT
GCCGTGGCTCCAACCGGGACCAAGCCTGCAGTGCCCGCCCCGGCTGTCGGACACACTCTCGAGGCAGACCCCGTC
AAGCCCGTGAGCAAGCCTGAGACCAAACCCGAGGTCAAATCCGAGGCCAAGCCTGAAGAGGCTGCTCCAGTGTCC
ACCGCGGCGGACGCGGCACCGACTACGTCTGTGAACCCCGCTGTCGGCGTCTCCGACACGGACAAAAGCAAGGGC
GAGGCCGCCGCCGTCGCTCCTGTGCCGGCCGCT
Transcript >Ophio5|5480
ATGTCGCAAGCACTCGAGAGGCCTGCTGCAGCCTCTCTCTTCCTTTTCCCTTTCCTCGTCCTCTTCCATCTTCCT
CTTCCGCCCCCTCCTCAGCAAGTCTGGGCAGAGCCTCATCTTCGTCTCGTCTCGTCGTCTCGTTACCTCTGGTGC
TTTCGTCCTTTGCAGCCTACCAGCACCGTCTCCCCGCCTCTCGTCGTGGGAGACCGTCGTGTTTCGCGCGTAACC
TCGTGCATATTTCACTTTGGTAGAGAATACTATCTCCCTCATCACCATGCCTGGCATACCTCCCGCAAGAAGCCT
GTCGAACAGAAGCCCGCCCAAGACGCCAAGCCCGCGGGGGGAGAGGCCGCTACGGCCACCCCCGTCACGACGCCT
GCCGTGGCTCCAACCGGGACCAAGCCTGCAGTGCCCGCCCCGGCTGTCGGACACACTCTCGAGGCAGACCCCGTC
AAGCCCGTGAGCAAGCCTGAGACCAAACCCGAGGTCAAATCCGAGGCCAAGCCTGAAGAGGCTGCTCCAGTGTCC
ACCGCGGCGGACGCGGCACCGACTACGTCTGTGAACCCCGCTGTCGGCGTCTCCGACACGGACAAAAGCAAGGGC
GAGGCCGCCGCCGTCGCTCCTGTGCCGGCCGCTTAA
Gene >Ophio5|5480
ATGTCGCAAGCACTCGAGAGGCCTGCTGCAGGTGCCAGGGAGGTACCGGTTGGCAGGTACCCGACCTTCATCTCG
TTCATCGCTCTTTTCTTCTCCTGAGCCTCTCTCTTCCTTTTCCCTTTCCTCGTCCTCTTCCATCTTCCTCTTCCG
CCCCCTCCTCAGCAAGTCTGGGCAGTCTGTCGTCGCCTGCCCATCTTCGTCTACCCTCTGACTGAGTCTCTGCCA
GGAGCCTCATCTTCGTCTCGTCTCGTCGTCTCGTTACCTCTGGTGCTTTCGTCCTTTGCAGCCTACCAGCACCGT
CTCCCCGCCTCTCGTCGTGGGAGACCGTCGTGTTTCGCGCGTAACCTCGTGCATATTTCACTTTGGTAGAGGTTC
GTTGCTGCCCTCACCCATTTGTTTTCCCCGTCCTGACTGACCAGTTTCCGACAGAATACTATCTCCCTCATCACC
ATGCCTGGCATACGTGAGTCATACCCTCTTCACCTTTGCTTCTCTCACCGTCTCTTTGACAAACCCCCCCCCCCC
CTCCCTCTCTCTCTCTTTGCCTCGTGTACCCTCGATTCAAACACCTATGCTAACCGGCCTGCAGCTCCCGGTGCC
TTCGATAACCTCAAGGAAAGGCTCAAGGCCGCCTTCAAGAAGAAGAGCAAGAAGCCTGTCGAACAGAAGCCCGCC
CAAGACGCCAAGCCCGCGGGGGGAGAGGCCGCTACGGCCACCCCCGTCACGACGCCTGCCGTGGCTCCAACCGGG
ACCAAGCCTGCAGTGCCCGCCCCGGCTGGTACGTGCCTCCTCGACGTAATTCGGACCACTTCGACTGACTTGATG
CTCTAGTCGGACACACTCTCGAGGCAGACCCCGTCAAGCCCGTGAGCAAGCCTGAGACCAAACCCGAGGTCAAAT
CCGAGGCCAAGCCTGAAGAGGCTGCTCCAGGTAAAAAACCCCAAACGTGCGACCCTTCGGTCATCGTGAGGCTGA
CGTCTTTTAGTGTCCACCGCGGCGGACGCGGCACCGACTACGTCTGTGAACCCCGCTGTCGGCGTCTCCGACACG
GACAAAAGCAAGGGCGAGGCCGCCGCCGTCGCTCCTGTGCCGGCCGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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