Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5477
Gene name
Locationscaffold_45:3380..4673
Strand-
Gene length (bp)1293
Transcript length (bp)1293
Coding sequence length (bp)1290
Protein length (aa) 430

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

Domain # Start End Length
1 150 172 22
2 182 201 19
3 222 244 22
4 259 281 22
5 337 359 22
6 369 391 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5477
MAENQGGNPSDSALSTSSGHDGVTVDSRESPDSVEEKRGGVEEKRGGVEERRGSVKEKSVNVDGKHQDVVNGGLF
PPGDAHRPSYASLEQRRSLSYALRATAPVYYDSRAATRTEWQRRAKTLDEYYDDNPHLLPQLPFTWHHGWRRWRL
FLFAFLVFVDGSALPIALYYGMRYAGHVEGWIIFAVITTIWGGPTYVEFAVRTLRLMKRERFYRPLGTDSRWCFD
VLNWASVVTITAVTALFIVGSAPHEVWLRVLCMPAPAILYCMGGTVALLTLFHAMGWPAPFRISSTGRGDTVLPG
AYYFVEDIVAVNAAAGRPYREALAARYRASRRFRRMLYVQSLFWSVPALVLAAALTAVAVTPDVPATGAYGVCWA
VPFLWSALWGGLTVWWCGREMAREKMEWDEADGRLANGSDRIRGMRHMGHGEVRD
Coding >Ophio5|5477
ATGGCTGAGAATCAGGGCGGCAACCCGTCCGACTCGGCCCTGTCGACCAGCTCGGGACATGATGGTGTTACCGTC
GACAGCCGGGAGAGCCCCGATTCTGTCGAGGAGAAGCGCGGCGGCGTCGAGGAGAAGCGCGGCGGCGTCGAGGAG
AGGCGCGGCAGCGTCAAGGAGAAGAGCGTCAACGTCGACGGGAAGCACCAAGACGTCGTCAACGGCGGCCTCTTC
CCGCCCGGCGACGCTCACCGGCCGTCGTACGCCAGCCTGGAGCAGCGACGAAGCCTGTCTTATGCGCTGAGGGCC
ACGGCCCCCGTCTACTACGACTCCCGGGCGGCGACGCGGACCGAGTGGCAGCGAAGAGCCAAGACGCTCGACGAG
TACTACGACGACAACCCGCATCTGCTGCCGCAGCTACCGTTTACGTGGCATCACGGCTGGCGGCGCTGGCGGCTG
TTCTTGTTCGCCTTTCTCGTCTTCGTCGACGGCTCGGCGCTGCCCATCGCCCTGTACTACGGCATGCGGTACGCC
GGCCACGTCGAGGGCTGGATCATCTTCGCCGTCATCACCACCATCTGGGGCGGGCCGACGTACGTCGAGTTCGCG
GTCCGGACGCTGCGGCTGATGAAGCGGGAGCGCTTCTACCGGCCCCTGGGGACCGACAGCCGGTGGTGCTTCGAC
GTGCTCAACTGGGCGTCGGTGGTGACCATCACGGCCGTCACGGCCCTCTTCATCGTCGGCAGCGCGCCGCACGAG
GTGTGGCTGCGCGTCCTGTGTATGCCGGCGCCGGCCATCCTGTACTGCATGGGCGGCACGGTGGCGCTGCTGACG
CTCTTCCACGCAATGGGCTGGCCGGCGCCCTTCCGCATCAGCTCGACGGGCCGGGGCGACACGGTGCTGCCGGGC
GCCTACTACTTCGTCGAGGACATTGTCGCCGTCAACGCGGCAGCGGGGCGGCCTTACCGAGAGGCGCTGGCGGCG
CGATACCGGGCCAGCCGGCGCTTCCGCCGCATGCTGTACGTGCAGTCGCTGTTCTGGTCGGTGCCGGCGCTGGTA
CTGGCCGCGGCGCTGACGGCGGTGGCCGTGACGCCCGACGTGCCGGCCACGGGGGCCTACGGCGTCTGCTGGGCC
GTGCCGTTCCTGTGGTCGGCGCTCTGGGGGGGGCTGACGGTCTGGTGGTGCGGCCGCGAGATGGCGAGGGAGAAG
ATGGAGTGGGACGAGGCTGACGGCCGGCTGGCCAACGGGAGCGATCGAATCCGTGGAATGAGGCACATGGGACAT
GGGGAGGTTCGGGAT
Transcript >Ophio5|5477
ATGGCTGAGAATCAGGGCGGCAACCCGTCCGACTCGGCCCTGTCGACCAGCTCGGGACATGATGGTGTTACCGTC
GACAGCCGGGAGAGCCCCGATTCTGTCGAGGAGAAGCGCGGCGGCGTCGAGGAGAAGCGCGGCGGCGTCGAGGAG
AGGCGCGGCAGCGTCAAGGAGAAGAGCGTCAACGTCGACGGGAAGCACCAAGACGTCGTCAACGGCGGCCTCTTC
CCGCCCGGCGACGCTCACCGGCCGTCGTACGCCAGCCTGGAGCAGCGACGAAGCCTGTCTTATGCGCTGAGGGCC
ACGGCCCCCGTCTACTACGACTCCCGGGCGGCGACGCGGACCGAGTGGCAGCGAAGAGCCAAGACGCTCGACGAG
TACTACGACGACAACCCGCATCTGCTGCCGCAGCTACCGTTTACGTGGCATCACGGCTGGCGGCGCTGGCGGCTG
TTCTTGTTCGCCTTTCTCGTCTTCGTCGACGGCTCGGCGCTGCCCATCGCCCTGTACTACGGCATGCGGTACGCC
GGCCACGTCGAGGGCTGGATCATCTTCGCCGTCATCACCACCATCTGGGGCGGGCCGACGTACGTCGAGTTCGCG
GTCCGGACGCTGCGGCTGATGAAGCGGGAGCGCTTCTACCGGCCCCTGGGGACCGACAGCCGGTGGTGCTTCGAC
GTGCTCAACTGGGCGTCGGTGGTGACCATCACGGCCGTCACGGCCCTCTTCATCGTCGGCAGCGCGCCGCACGAG
GTGTGGCTGCGCGTCCTGTGTATGCCGGCGCCGGCCATCCTGTACTGCATGGGCGGCACGGTGGCGCTGCTGACG
CTCTTCCACGCAATGGGCTGGCCGGCGCCCTTCCGCATCAGCTCGACGGGCCGGGGCGACACGGTGCTGCCGGGC
GCCTACTACTTCGTCGAGGACATTGTCGCCGTCAACGCGGCAGCGGGGCGGCCTTACCGAGAGGCGCTGGCGGCG
CGATACCGGGCCAGCCGGCGCTTCCGCCGCATGCTGTACGTGCAGTCGCTGTTCTGGTCGGTGCCGGCGCTGGTA
CTGGCCGCGGCGCTGACGGCGGTGGCCGTGACGCCCGACGTGCCGGCCACGGGGGCCTACGGCGTCTGCTGGGCC
GTGCCGTTCCTGTGGTCGGCGCTCTGGGGGGGGCTGACGGTCTGGTGGTGCGGCCGCGAGATGGCGAGGGAGAAG
ATGGAGTGGGACGAGGCTGACGGCCGGCTGGCCAACGGGAGCGATCGAATCCGTGGAATGAGGCACATGGGACAT
GGGGAGGTTCGGGATTGA
Gene >Ophio5|5477
ATGGCTGAGAATCAGGGCGGCAACCCGTCCGACTCGGCCCTGTCGACCAGCTCGGGACATGATGGTGTTACCGTC
GACAGCCGGGAGAGCCCCGATTCTGTCGAGGAGAAGCGCGGCGGCGTCGAGGAGAAGCGCGGCGGCGTCGAGGAG
AGGCGCGGCAGCGTCAAGGAGAAGAGCGTCAACGTCGACGGGAAGCACCAAGACGTCGTCAACGGCGGCCTCTTC
CCGCCCGGCGACGCTCACCGGCCGTCGTACGCCAGCCTGGAGCAGCGACGAAGCCTGTCTTATGCGCTGAGGGCC
ACGGCCCCCGTCTACTACGACTCCCGGGCGGCGACGCGGACCGAGTGGCAGCGAAGAGCCAAGACGCTCGACGAG
TACTACGACGACAACCCGCATCTGCTGCCGCAGCTACCGTTTACGTGGCATCACGGCTGGCGGCGCTGGCGGCTG
TTCTTGTTCGCCTTTCTCGTCTTCGTCGACGGCTCGGCGCTGCCCATCGCCCTGTACTACGGCATGCGGTACGCC
GGCCACGTCGAGGGCTGGATCATCTTCGCCGTCATCACCACCATCTGGGGCGGGCCGACGTACGTCGAGTTCGCG
GTCCGGACGCTGCGGCTGATGAAGCGGGAGCGCTTCTACCGGCCCCTGGGGACCGACAGCCGGTGGTGCTTCGAC
GTGCTCAACTGGGCGTCGGTGGTGACCATCACGGCCGTCACGGCCCTCTTCATCGTCGGCAGCGCGCCGCACGAG
GTGTGGCTGCGCGTCCTGTGTATGCCGGCGCCGGCCATCCTGTACTGCATGGGCGGCACGGTGGCGCTGCTGACG
CTCTTCCACGCAATGGGCTGGCCGGCGCCCTTCCGCATCAGCTCGACGGGCCGGGGCGACACGGTGCTGCCGGGC
GCCTACTACTTCGTCGAGGACATTGTCGCCGTCAACGCGGCAGCGGGGCGGCCTTACCGAGAGGCGCTGGCGGCG
CGATACCGGGCCAGCCGGCGCTTCCGCCGCATGCTGTACGTGCAGTCGCTGTTCTGGTCGGTGCCGGCGCTGGTA
CTGGCCGCGGCGCTGACGGCGGTGGCCGTGACGCCCGACGTGCCGGCCACGGGGGCCTACGGCGTCTGCTGGGCC
GTGCCGTTCCTGTGGTCGGCGCTCTGGGGGGGGCTGACGGTCTGGTGGTGCGGCCGCGAGATGGCGAGGGAGAAG
ATGGAGTGGGACGAGGCTGACGGCCGGCTGGCCAACGGGAGCGATCGAATCCGTGGAATGAGGCACATGGGACAT
GGGGAGGTTCGGGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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