Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5457
Gene name
Locationscaffold_446:13581..14898
Strand-
Gene length (bp)1317
Transcript length (bp)1317
Coding sequence length (bp)1314
Protein length (aa) 438

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16010 CDH-cyt Cytochrome domain of cellobiose dehydrogenase 1.6E-11 32 196
PF03188 Cytochrom_B561 Eukaryotic cytochrome b561 3.0E-09 247 366

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 245 267 22
2 279 301 22
3 316 338 22
4 350 372 22
5 376 398 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5457
MLALGLLLAILLAFPTLSATEPVQYCRFGHRDQQIDFCVGITTHHNHSTSHYDLYMSMSVTRSSSPALGWTAIGT
GPVMAGSLMFIVYGDPGSGSNPMVSIRTVNGHRQPHLVQKQDMAGADIRLLQTTWLSSSDAEYSAQIALVCYSCD
LWPGLSLSAASQPWIWAWNKKQQFQAYSSDAELDMHAHHAGNGGWGSFFVDMGRSLSDDVGYPSLPPIRPGIAMV
GSWEGGRMGMLNSPSANPLPRLHGLCMLTAFLLLFPLGIVIIRSGMKEAFRRHWILQASAAGLVTVGVGLAIAIR
LSDHDDDDASTRHQVLGGTTAVLVLAQSVAGYQHHVLYVRLRQRTCVSYLHIWLGRLCLVGGWAAILNVPGLGPS
WSIATLSIMFLEAAGLVTWIYASKRRERGSKQGVSEFQDSLTDHFSLQDAADEEVEDKETTAI
Coding >Ophio5|5457
ATGCTCGCGCTCGGCCTGCTCTTAGCCATTCTACTGGCCTTTCCCACACTCTCGGCCACAGAGCCGGTCCAATAC
TGCCGTTTTGGTCATCGTGATCAACAAATCGACTTTTGTGTCGGCATCACGACGCATCACAACCACTCGACTTCG
CATTATGACTTGTACATGAGCATGAGTGTGACGCGGTCCTCGTCTCCGGCTCTGGGCTGGACCGCCATCGGCACG
GGGCCCGTCATGGCCGGGTCTCTGATGTTCATCGTCTACGGCGACCCCGGGTCCGGTTCCAATCCGATGGTCAGT
ATACGGACCGTCAACGGCCACAGACAGCCGCATCTTGTGCAGAAGCAAGACATGGCCGGCGCCGACATCCGACTT
CTGCAGACCACATGGCTTTCCTCGTCGGATGCCGAGTATTCGGCGCAAATCGCTCTGGTCTGCTACTCGTGCGAC
CTTTGGCCTGGCCTGTCCCTATCTGCTGCCTCTCAACCTTGGATCTGGGCCTGGAACAAGAAGCAGCAGTTCCAA
GCTTACTCGTCCGACGCGGAGCTTGACATGCATGCTCATCATGCCGGCAACGGTGGTTGGGGTTCCTTCTTTGTC
GACATGGGCCGCTCGCTCAGCGACGACGTCGGATATCCCTCCCTTCCTCCCATACGGCCCGGGATAGCCATGGTG
GGAAGTTGGGAAGGCGGTCGGATGGGGATGCTGAACTCGCCGAGTGCGAATCCGCTACCGAGACTTCATGGCCTG
TGCATGTTGACGGCCTTTTTGCTCCTTTTCCCCCTTGGCATCGTGATAATCCGGTCAGGGATGAAGGAAGCCTTT
CGCCGTCACTGGATCCTTCAGGCTTCGGCTGCCGGCTTGGTCACCGTCGGCGTCGGGCTGGCCATTGCCATACGC
CTCTCGGACCATGATGATGACGATGCGTCGACGAGGCACCAAGTGCTAGGCGGCACGACAGCCGTCTTAGTCCTG
GCACAGTCGGTGGCGGGATACCAGCATCACGTCCTGTACGTCCGGCTCCGCCAGCGGACTTGTGTCTCCTATCTG
CATATTTGGCTGGGCCGGCTGTGCCTTGTCGGGGGCTGGGCCGCCATCCTGAATGTCCCGGGTCTTGGGCCGAGT
TGGTCGATAGCGACGCTGAGCATCATGTTCCTCGAAGCGGCCGGTCTCGTGACATGGATATACGCTTCCAAGCGA
AGGGAGCGCGGGTCAAAACAAGGCGTCTCCGAGTTTCAAGACAGCTTGACTGACCATTTTTCTCTCCAAGACGCC
GCCGATGAGGAAGTCGAGGACAAGGAGACTACAGCCATC
Transcript >Ophio5|5457
ATGCTCGCGCTCGGCCTGCTCTTAGCCATTCTACTGGCCTTTCCCACACTCTCGGCCACAGAGCCGGTCCAATAC
TGCCGTTTTGGTCATCGTGATCAACAAATCGACTTTTGTGTCGGCATCACGACGCATCACAACCACTCGACTTCG
CATTATGACTTGTACATGAGCATGAGTGTGACGCGGTCCTCGTCTCCGGCTCTGGGCTGGACCGCCATCGGCACG
GGGCCCGTCATGGCCGGGTCTCTGATGTTCATCGTCTACGGCGACCCCGGGTCCGGTTCCAATCCGATGGTCAGT
ATACGGACCGTCAACGGCCACAGACAGCCGCATCTTGTGCAGAAGCAAGACATGGCCGGCGCCGACATCCGACTT
CTGCAGACCACATGGCTTTCCTCGTCGGATGCCGAGTATTCGGCGCAAATCGCTCTGGTCTGCTACTCGTGCGAC
CTTTGGCCTGGCCTGTCCCTATCTGCTGCCTCTCAACCTTGGATCTGGGCCTGGAACAAGAAGCAGCAGTTCCAA
GCTTACTCGTCCGACGCGGAGCTTGACATGCATGCTCATCATGCCGGCAACGGTGGTTGGGGTTCCTTCTTTGTC
GACATGGGCCGCTCGCTCAGCGACGACGTCGGATATCCCTCCCTTCCTCCCATACGGCCCGGGATAGCCATGGTG
GGAAGTTGGGAAGGCGGTCGGATGGGGATGCTGAACTCGCCGAGTGCGAATCCGCTACCGAGACTTCATGGCCTG
TGCATGTTGACGGCCTTTTTGCTCCTTTTCCCCCTTGGCATCGTGATAATCCGGTCAGGGATGAAGGAAGCCTTT
CGCCGTCACTGGATCCTTCAGGCTTCGGCTGCCGGCTTGGTCACCGTCGGCGTCGGGCTGGCCATTGCCATACGC
CTCTCGGACCATGATGATGACGATGCGTCGACGAGGCACCAAGTGCTAGGCGGCACGACAGCCGTCTTAGTCCTG
GCACAGTCGGTGGCGGGATACCAGCATCACGTCCTGTACGTCCGGCTCCGCCAGCGGACTTGTGTCTCCTATCTG
CATATTTGGCTGGGCCGGCTGTGCCTTGTCGGGGGCTGGGCCGCCATCCTGAATGTCCCGGGTCTTGGGCCGAGT
TGGTCGATAGCGACGCTGAGCATCATGTTCCTCGAAGCGGCCGGTCTCGTGACATGGATATACGCTTCCAAGCGA
AGGGAGCGCGGGTCAAAACAAGGCGTCTCCGAGTTTCAAGACAGCTTGACTGACCATTTTTCTCTCCAAGACGCC
GCCGATGAGGAAGTCGAGGACAAGGAGACTACAGCCATCTAG
Gene >Ophio5|5457
ATGCTCGCGCTCGGCCTGCTCTTAGCCATTCTACTGGCCTTTCCCACACTCTCGGCCACAGAGCCGGTCCAATAC
TGCCGTTTTGGTCATCGTGATCAACAAATCGACTTTTGTGTCGGCATCACGACGCATCACAACCACTCGACTTCG
CATTATGACTTGTACATGAGCATGAGTGTGACGCGGTCCTCGTCTCCGGCTCTGGGCTGGACCGCCATCGGCACG
GGGCCCGTCATGGCCGGGTCTCTGATGTTCATCGTCTACGGCGACCCCGGGTCCGGTTCCAATCCGATGGTCAGT
ATACGGACCGTCAACGGCCACAGACAGCCGCATCTTGTGCAGAAGCAAGACATGGCCGGCGCCGACATCCGACTT
CTGCAGACCACATGGCTTTCCTCGTCGGATGCCGAGTATTCGGCGCAAATCGCTCTGGTCTGCTACTCGTGCGAC
CTTTGGCCTGGCCTGTCCCTATCTGCTGCCTCTCAACCTTGGATCTGGGCCTGGAACAAGAAGCAGCAGTTCCAA
GCTTACTCGTCCGACGCGGAGCTTGACATGCATGCTCATCATGCCGGCAACGGTGGTTGGGGTTCCTTCTTTGTC
GACATGGGCCGCTCGCTCAGCGACGACGTCGGATATCCCTCCCTTCCTCCCATACGGCCCGGGATAGCCATGGTG
GGAAGTTGGGAAGGCGGTCGGATGGGGATGCTGAACTCGCCGAGTGCGAATCCGCTACCGAGACTTCATGGCCTG
TGCATGTTGACGGCCTTTTTGCTCCTTTTCCCCCTTGGCATCGTGATAATCCGGTCAGGGATGAAGGAAGCCTTT
CGCCGTCACTGGATCCTTCAGGCTTCGGCTGCCGGCTTGGTCACCGTCGGCGTCGGGCTGGCCATTGCCATACGC
CTCTCGGACCATGATGATGACGATGCGTCGACGAGGCACCAAGTGCTAGGCGGCACGACAGCCGTCTTAGTCCTG
GCACAGTCGGTGGCGGGATACCAGCATCACGTCCTGTACGTCCGGCTCCGCCAGCGGACTTGTGTCTCCTATCTG
CATATTTGGCTGGGCCGGCTGTGCCTTGTCGGGGGCTGGGCCGCCATCCTGAATGTCCCGGGTCTTGGGCCGAGT
TGGTCGATAGCGACGCTGAGCATCATGTTCCTCGAAGCGGCCGGTCTCGTGACATGGATATACGCTTCCAAGCGA
AGGGAGCGCGGGTCAAAACAAGGCGTCTCCGAGTTTCAAGACAGCTTGACTGACCATTTTTCTCTCCAAGACGCC
GCCGATGAGGAAGTCGAGGACAAGGAGACTACAGCCATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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