Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5441
Gene name
Locationscaffold_444:11270..12407
Strand-
Gene length (bp)1137
Transcript length (bp)666
Coding sequence length (bp)663
Protein length (aa) 221

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 157 179 22
2 189 211 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5441
MRIDQSHNHPVQHRASRLVASFIFRVSIFSGIMSYAQVAASGPRQSSQEAAAPQPPEVVPNESASTSSLIDVDMP
SVQTVHSDFLDQDIKTTTQAERRDREAESSSLKKKASAGANSSSNNSSSSSSKASSGSMRSRADAWLTGHFADLS
DGSAGALAVANLAAVVGLSSYLGYRAWALYDRGALDWKAAGVGVGILAAVGAVESVVGGFLYRGKANKGSS
Coding >Ophio5|5441
ATGCGCATTGATCAGAGCCATAATCACCCCGTCCAGCATCGCGCCTCACGTCTCGTCGCTTCTTTCATCTTCCGA
GTGTCTATCTTCTCCGGCATCATGTCGTACGCCCAAGTCGCAGCCAGCGGGCCACGGCAATCCTCGCAAGAGGCG
GCCGCTCCTCAACCTCCGGAGGTGGTGCCCAACGAAAGCGCCTCGACATCGTCCCTCATCGACGTCGACATGCCC
AGCGTCCAGACCGTCCACTCCGACTTCCTCGACCAGGACATCAAGACGACGACGCAAGCCGAGCGACGCGACCGC
GAAGCCGAGTCGTCATCACTCAAGAAAAAGGCATCCGCCGGAGCTAACAGCAGCAGCAACAACAGCAGCAGCAGC
AGCAGCAAGGCCTCATCCGGCTCGATGCGCAGCAGGGCCGACGCCTGGCTGACCGGCCACTTCGCCGACTTATCC
GATGGCAGCGCCGGCGCCTTGGCCGTAGCCAACCTTGCTGCCGTCGTCGGCCTCAGCTCCTATCTCGGATACAGG
GCTTGGGCGCTGTATGATCGTGGCGCGCTGGATTGGAAGGCGGCTGGTGTCGGCGTCGGTATCTTGGCTGCCGTC
GGCGCTGTCGAGTCCGTCGTCGGTGGCTTTTTGTATAGGGGTAAGGCGAATAAGGGCTCGTCG
Transcript >Ophio5|5441
ATGCGCATTGATCAGAGCCATAATCACCCCGTCCAGCATCGCGCCTCACGTCTCGTCGCTTCTTTCATCTTCCGA
GTGTCTATCTTCTCCGGCATCATGTCGTACGCCCAAGTCGCAGCCAGCGGGCCACGGCAATCCTCGCAAGAGGCG
GCCGCTCCTCAACCTCCGGAGGTGGTGCCCAACGAAAGCGCCTCGACATCGTCCCTCATCGACGTCGACATGCCC
AGCGTCCAGACCGTCCACTCCGACTTCCTCGACCAGGACATCAAGACGACGACGCAAGCCGAGCGACGCGACCGC
GAAGCCGAGTCGTCATCACTCAAGAAAAAGGCATCCGCCGGAGCTAACAGCAGCAGCAACAACAGCAGCAGCAGC
AGCAGCAAGGCCTCATCCGGCTCGATGCGCAGCAGGGCCGACGCCTGGCTGACCGGCCACTTCGCCGACTTATCC
GATGGCAGCGCCGGCGCCTTGGCCGTAGCCAACCTTGCTGCCGTCGTCGGCCTCAGCTCCTATCTCGGATACAGG
GCTTGGGCGCTGTATGATCGTGGCGCGCTGGATTGGAAGGCGGCTGGTGTCGGCGTCGGTATCTTGGCTGCCGTC
GGCGCTGTCGAGTCCGTCGTCGGTGGCTTTTTGTATAGGGGTAAGGCGAATAAGGGCTCGTCGTAG
Gene >Ophio5|5441
ATGCGCATTGATCAGAGCCATAATCACCGTCAGAAGCCCTGCTAGCCCGTAGCAACAGCAGGTACCTAGGCAGTC
AGTGGTAGTAGAGGTGGGTGGTGGTAGTAGTAGTAGCGTAGCCCGTCAATATTGAGGTGGCCAATCCCGAGGCCA
TCAAATCCCACTCGGACGACGCTGTGGACTCAAGAAAGTACCGCCGTAACCCCCGCGCCTCCCAACTCATCGCCC
GCGTCCCCCCCCGGGGTTCCAAGTCACACTACAACCTCATCCTCCGAAGGTCTCCCCCCCGCCGGAAAAAAAAAA
AAAACAGCTGTCCGACAGCCGTCCAGCATCGCGCCTCACGTCTCGTCGCTTCTTTCATCTTCCGAGTGTCTATCT
TCTCCGGCATCAGTGAGTCTCTTTCTCGTCGGCGACGCGTCCAGCCACTAACGTCGGGTTTCGCAGTGTCGTACG
CCCAAGTCGCAGCCAGCGGGCCACGGCAATCCTCGCAAGAGGTGAGTTATCGAGCGGGGGCAAGGGGGGGAAAGG
GGGGAGACGAAGAAGGGAAGAATAAGAGAGAAAGAGAGAGAGAGAGAGAGAGAAGAACAGGCGGGGTTTCTAAAA
CTGAAATGATCAATCTAGGCGGCCGCTCCTCAACCTCCGGAGGTGGTGCCCAACGAAAGCGCCTCGACATCGTCC
CTCATCGACGTCGACATGCCCAGCGTCCAGACCGTCCACTCCGACTTCCTCGACCAGGACATCAAGACGACGACG
CAAGCCGAGCGACGCGACCGCGAAGCCGAGTCGTCATCACTCAAGAAAAAGGCATCCGCCGGAGCTAACAGCAGC
AGCAACAACAGCAGCAGCAGCAGCAGCAAGGCCTCATCCGGCTCGATGCGCAGCAGGGCCGACGCCTGGCTGACC
GGCCACTTCGCCGACTTATCCGATGGCAGCGCCGGCGCCTTGGCCGTAGCCAACCTTGCTGCCGTCGTCGGCCTC
AGCTCCTATCTCGGATACAGGGCTTGGGCGCTGTATGATCGTGGCGCGCTGGATTGGAAGGCGGCTGGTGTCGGC
GTCGGTATCTTGGCTGCCGTCGGCGCTGTCGAGTCCGTCGTCGGTGGCTTTTTGTATAGGGGTAAGGCGAATAAG
GGCTCGTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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