Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|5431
Gene name
Location	scaffold_443:10988..11856
Strand	-
Gene length (bp)	868
Transcript length (bp)	783
Coding sequence length (bp)	780
Protein length (aa)	260

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	237	259	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|5431 MHVSSTLAFAGVATASFQLYHMAVSPNGGLVRRGNGAYQPEIATCQSGNSCAEACGEGFELCPATGAAADEAHCV NRLQHETCCTGGTGHSCAAGFYCTINKAGQNICCPEGQDLAACAAEQKVAGELKLATSTSAPPPPPPPPTTTTST TTKSTKMMALTTSMTPVVTTTPLSSFKALVNTTTVASTIYVSPLSSTGCSTAPWPALNATVPHTALASQAPFATA QPSSNPTTALGVSAAGAGAGVSYLLLVVTALVALL
Coding	>Ophio5\|5431 ATGCACGTCTCGTCTACGCTCGCCTTCGCAGGCGTCGCTACCGCCTCCTTCCAGCTCTACCACATGGCCGTCTCG CCCAACGGGGGCCTCGTCCGTCGCGGAAACGGCGCCTATCAGCCGGAGATTGCGACGTGTCAGAGTGGGAATAGT TGCGCCGAGGCTTGTGGTGAGGGCTTCGAGTTGTGTCCTGCTACTGGGGCGGCGGCGGATGAGGCGCATTGCGTG AATCGTCTGCAGCATGAGACGTGCTGCACCGGCGGTACTGGCCATTCCTGTGCCGCTGGCTTCTACTGCACCATC AACAAGGCTGGACAAAATATCTGCTGTCCCGAGGGTCAGGACCTGGCCGCTTGCGCCGCCGAGCAAAAGGTCGCG GGTGAGCTGAAGTTGGCCACTTCGACTTCCGCTCCTCCTCCTCCTCCTCCTCCTCCTACTACTACGACGTCTACC ACGACGAAATCGACCAAGATGATGGCCCTGACGACATCCATGACGCCGGTCGTGACGACGACGCCGCTCTCGAGC TTCAAGGCGCTCGTCAACACCACCACCGTCGCCAGCACAATCTACGTCAGCCCCCTCAGCTCGACCGGCTGCAGC ACCGCTCCTTGGCCGGCTCTCAACGCTACCGTCCCCCACACGGCACTGGCCAGCCAGGCGCCCTTTGCCACGGCC CAGCCGTCGTCCAACCCTACTACCGCTCTGGGCGTCAGTGCCGCCGGTGCCGGTGCCGGTGTCAGCTACCTGCTA CTCGTCGTGACAGCTCTGGTCGCCCTGCTG
Transcript	>Ophio5\|5431 ATGCACGTCTCGTCTACGCTCGCCTTCGCAGGCGTCGCTACCGCCTCCTTCCAGCTCTACCACATGGCCGTCTCG CCCAACGGGGGCCTCGTCCGTCGCGGAAACGGCGCCTATCAGCCGGAGATTGCGACGTGTCAGAGTGGGAATAGT TGCGCCGAGGCTTGTGGTGAGGGCTTCGAGTTGTGTCCTGCTACTGGGGCGGCGGCGGATGAGGCGCATTGCGTG AATCGTCTGCAGCATGAGACGTGCTGCACCGGCGGTACTGGCCATTCCTGTGCCGCTGGCTTCTACTGCACCATC AACAAGGCTGGACAAAATATCTGCTGTCCCGAGGGTCAGGACCTGGCCGCTTGCGCCGCCGAGCAAAAGGTCGCG GGTGAGCTGAAGTTGGCCACTTCGACTTCCGCTCCTCCTCCTCCTCCTCCTCCTCCTACTACTACGACGTCTACC ACGACGAAATCGACCAAGATGATGGCCCTGACGACATCCATGACGCCGGTCGTGACGACGACGCCGCTCTCGAGC TTCAAGGCGCTCGTCAACACCACCACCGTCGCCAGCACAATCTACGTCAGCCCCCTCAGCTCGACCGGCTGCAGC ACCGCTCCTTGGCCGGCTCTCAACGCTACCGTCCCCCACACGGCACTGGCCAGCCAGGCGCCCTTTGCCACGGCC CAGCCGTCGTCCAACCCTACTACCGCTCTGGGCGTCAGTGCCGCCGGTGCCGGTGCCGGTGTCAGCTACCTGCTA CTCGTCGTGACAGCTCTGGTCGCCCTGCTGTGA
Gene	>Ophio5\|5431 ATGCACGTCTCGTCTACGCTCGCCTTCGCAGGCGTCGCTACCGCCTCCTTCCAGCTCTACCACATGGCCGTCTCG CCCAACGGGGGCCTCGTCCGTCGCGGAAACGGCGCCTATCAGCCGGAGATTGCGACGTGTCAGAGTGGGAATAGT TGCGCCGAGGCTTGTGGTGAGGGCTTCGAGTTGTGTCCTGCTACTGGGGCGGCGGCGGATGAGGCGCATTGCGTG AATCGTCTGCAGCATGAGACGTGCTGCACCGGCGGTACTGGCCGTATGTCGTTGTGTGCTCTTTTTTTCCTCTCC TTTTTTTCTTCTTCTTTTTTTTTTCTTTTGCTGACTTGCGGCTTGCTTGCCAGATTCCTGTGCCGCTGGCTTCTA CTGCACCATCAACAAGGCTGGACAAAATATCTGCTGTCCCGAGGGTCAGGACCTGGCCGCTTGCGCCGCCGAGCA AAAGGTCGCGGGTGAGCTGAAGTTGGCCACTTCGACTTCCGCTCCTCCTCCTCCTCCTCCTCCTCCTACTACTAC GACGTCTACCACGACGAAATCGACCAAGATGATGGCCCTGACGACATCCATGACGCCGGTCGTGACGACGACGCC GCTCTCGAGCTTCAAGGCGCTCGTCAACACCACCACCGTCGCCAGCACAATCTACGTCAGCCCCCTCAGCTCGAC CGGCTGCAGCACCGCTCCTTGGCCGGCTCTCAACGCTACCGTCCCCCACACGGCACTGGCCAGCCAGGCGCCCTT TGCCACGGCCCAGCCGTCGTCCAACCCTACTACCGCTCTGGGCGTCAGTGCCGCCGGTGCCGGTGCCGGTGTCAG CTACCTGCTACTCGTCGTGACAGCTCTGGTCGCCCTGCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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