© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5427 |
| Gene name | |
| Location | scaffold_443:4295..5543 |
| Strand | - |
| Gene length (bp) | 1248 |
| Transcript length (bp) | 1125 |
| Coding sequence length (bp) | 1122 |
| Protein length (aa) | 374 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 3.7E-33 | 4 | 304 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54NS8|AIFB_DICDI | Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum GN=aifB PE=3 SV=1 | 3 | 371 | 5.0E-20 |
| sp|B5FXE5|AIFM2_TAEGU | Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2 SV=1 | 35 | 373 | 5.0E-19 |
| sp|Q54NS9|AIFA_DICDI | Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum GN=aifA PE=3 SV=1 | 3 | 287 | 8.0E-17 |
| sp|P52923|AIF1_YEAST | Apoptosis-inducing factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AIF1 PE=1 SV=1 | 34 | 364 | 3.0E-16 |
| sp|Q8BUE4|AIFM2_MOUSE | Apoptosis-inducing factor 2 OS=Mus musculus GN=Aifm2 PE=1 SV=1 | 80 | 360 | 8.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54NS8|AIFB_DICDI | Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum GN=aifB PE=3 SV=1 | 3 | 371 | 5.0E-20 |
| sp|B5FXE5|AIFM2_TAEGU | Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2 SV=1 | 35 | 373 | 5.0E-19 |
| sp|Q54NS9|AIFA_DICDI | Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum GN=aifA PE=3 SV=1 | 3 | 287 | 8.0E-17 |
| sp|P52923|AIF1_YEAST | Apoptosis-inducing factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AIF1 PE=1 SV=1 | 34 | 364 | 3.0E-16 |
| sp|Q8BUE4|AIFM2_MOUSE | Apoptosis-inducing factor 2 OS=Mus musculus GN=Aifm2 PE=1 SV=1 | 80 | 360 | 8.0E-14 |
| sp|Q9BRQ8|AIFM2_HUMAN | Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1 | 110 | 360 | 2.0E-13 |
| sp|B4F6I3|AIFM2_XENTR | Apoptosis-inducing factor 2 OS=Xenopus tropicalis GN=aifm2 PE=2 SV=1 | 35 | 373 | 2.0E-11 |
| sp|A5PJM4|AIFM2_BOVIN | Apoptosis-inducing factor 2 OS=Bos taurus GN=AIFM2 PE=2 SV=1 | 35 | 360 | 1.0E-10 |
| sp|Q6GLW8|AIFM2_XENLA | Apoptosis-inducing factor 2 OS=Xenopus laevis GN=aifm2 PE=2 SV=1 | 104 | 373 | 3.0E-09 |
| sp|P00393|DHNA_ECOLI | NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1 SV=2 | 80 | 303 | 3.0E-08 |
| sp|Q58065|NAOX_METJA | Putative NADH oxidase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0649 PE=3 SV=2 | 6 | 289 | 6.0E-08 |
| sp|Q9LK94|MDAR4_ARATH | Monodehydroascorbate reductase 4, peroxisomal OS=Arabidopsis thaliana GN=MDAR4 PE=1 SV=1 | 72 | 291 | 7.0E-08 |
| sp|M1BYJ7|ENDB1_SOLTU | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Solanum tuberosum GN=NDB1 PE=3 SV=1 | 3 | 289 | 1.0E-07 |
| sp|Q9ST62|NDB1_SOLTU | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Solanum tuberosum GN=NDB1 PE=1 SV=1 | 3 | 289 | 2.0E-07 |
| sp|Q4L4V6|Y2010_STAHJ | NADH dehydrogenase-like protein SH2010 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1 | 3 | 176 | 2.0E-07 |
| sp|B7NSJ1|NORW_ECO7I | Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=norW PE=3 SV=1 | 1 | 286 | 2.0E-07 |
| sp|Q8GXR9|DHNA_ARATH | Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDC1 PE=1 SV=2 | 5 | 303 | 5.0E-07 |
| sp|A9MFX5|NORW_SALAR | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=norW PE=3 SV=1 | 1 | 286 | 6.0E-07 |
| sp|B5FG80|NORW_VIBFM | Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio fischeri (strain MJ11) GN=norW PE=3 SV=1 | 106 | 286 | 7.0E-07 |
| sp|Q49W80|Y1834_STAS1 | NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1834 PE=3 SV=1 | 3 | 176 | 1.0E-06 |
| sp|Q5HQM1|Y527_STAEQ | NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q8ZMJ6|NORW_SALTY | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=norW PE=3 SV=1 | 1 | 286 | 2.0E-06 |
| sp|O32117|YUTJ_BACSU | NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain 168) GN=yutJ PE=3 SV=2 | 1 | 307 | 2.0E-06 |
| sp|Q2YWP9|Y807_STAAB | NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q7A6J4|Y802_STAAN | NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus (strain N315) GN=SA0802 PE=1 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q2FID4|Y844_STAA3 | NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q2FZV7|Y878_STAA8 | NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=1 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q6GIE7|Y903_STAAR | NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0903 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q99VE0|Y941_STAAM | NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0941 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q5HHE4|Y944_STAAC | NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus (strain COL) GN=SACOL0944 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q48A14|STHA_COLP3 | Soluble pyridine nucleotide transhydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sthA PE=3 SV=1 | 74 | 291 | 2.0E-06 |
| sp|Q6GAY5|Y811_STAAS | NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus (strain MSSA476) GN=SAS0811 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|Q8NXG0|Y823_STAAW | NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus (strain MW2) GN=MW0823 PE=3 SV=1 | 3 | 176 | 2.0E-06 |
| sp|B5F365|NORW_SALA4 | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella agona (strain SL483) GN=norW PE=3 SV=1 | 1 | 286 | 3.0E-06 |
| sp|B4TT18|NORW_SALSV | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella schwarzengrund (strain CVM19633) GN=norW PE=3 SV=1 | 1 | 286 | 5.0E-06 |
| sp|Q9GRX6|AIFM1_DICDI | Apoptosis-inducing factor 1, mitochondrial OS=Dictyostelium discoideum GN=aif PE=2 SV=1 | 108 | 289 | 5.0E-06 |
| sp|Q8D4F7|NORW_VIBVU | Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus (strain CMCP6) GN=norW PE=3 SV=1 | 106 | 286 | 7.0E-06 |
| sp|B4T3B2|NORW_SALNS | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella newport (strain SL254) GN=norW PE=3 SV=1 | 1 | 286 | 7.0E-06 |
| sp|B5FSZ2|NORW_SALDC | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella dublin (strain CT_02021853) GN=norW PE=3 SV=1 | 1 | 286 | 8.0E-06 |
| sp|A9N0E0|NORW_SALPB | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=norW PE=3 SV=1 | 1 | 286 | 8.0E-06 |
| sp|B4TF25|NORW_SALHS | Nitric oxide reductase FlRd-NAD(+) reductase OS=Salmonella heidelberg (strain SL476) GN=norW PE=3 SV=1 | 1 | 286 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5427 MSKTVLILGGSLGGLAVAHQLLKKTRPHVEHLRVVLVSKNSHFYWCLASVRAVVPGLVQDSQILQPIEPGLRQYP EDSVDFIVGTASKIDVTARRVRVSVFEGADREIKYDYLVIATGADAAVRDMPWKASGSYEDCLTSLHRTSERIRT AEHIVVGGGGATGVELAAEIKHEFPSKTVVILNSSDHLVAGDSSAASIERELLRLGVVVTKGVRGDPSDDAPRPD GKTVVHLSDGSYLLTDLYLPTTGLSPNTSFLPSGWLTDGGYVQVDECMRVTGASDIWALGDVVSKPRAGFLITEA QAAGVARNIGLVLQGKDQRSVSGPPLDIFICSIGRDRGAGRLGPIPVPSLLVWAVKGRTLGMERTVKYANGTMW |
| Coding | >Ophio5|5427 ATGTCCAAGACGGTACTCATTCTCGGCGGCTCGCTCGGCGGCTTGGCCGTCGCTCACCAGCTGCTCAAGAAGACG CGCCCCCATGTCGAGCATCTCCGCGTCGTCCTCGTCTCCAAGAATAGCCATTTTTATTGGTGTCTTGCCTCTGTG CGGGCCGTCGTCCCCGGCCTCGTTCAAGACTCGCAGATCCTGCAGCCCATCGAGCCGGGACTGCGCCAATATCCG GAAGACAGCGTCGACTTCATCGTCGGTACCGCCTCCAAGATCGATGTGACGGCGAGACGAGTGCGCGTCTCCGTC TTCGAAGGAGCCGACCGCGAAATCAAATATGACTACCTCGTCATCGCCACGGGCGCCGACGCCGCAGTGAGGGAC ATGCCCTGGAAGGCGTCCGGCTCGTACGAAGACTGCCTCACCAGCTTACACCGCACCTCGGAACGCATCCGTACG GCAGAGCACATCGTCGTGGGCGGAGGCGGCGCCACGGGCGTCGAGCTGGCCGCCGAGATCAAGCACGAGTTTCCA TCCAAGACGGTCGTGATCCTCAACTCCTCCGATCATCTCGTCGCCGGCGATTCCTCTGCTGCGAGTATCGAGCGC GAGCTGCTACGCCTCGGCGTCGTCGTCACCAAGGGCGTGCGCGGGGATCCCTCCGACGACGCCCCGAGACCAGAT GGAAAGACGGTTGTCCACCTATCAGACGGCAGTTATTTACTTACTGATCTCTATCTGCCCACTACCGGCCTCTCA CCCAATACGAGCTTCTTGCCCAGCGGCTGGCTGACGGACGGCGGCTACGTCCAAGTCGACGAGTGCATGCGCGTC ACTGGCGCATCTGACATCTGGGCCTTGGGCGACGTCGTGTCCAAGCCGCGGGCCGGCTTCCTCATCACCGAGGCT CAGGCCGCCGGCGTCGCCAGGAACATTGGTCTGGTACTGCAGGGTAAGGACCAGCGCTCCGTCAGTGGTCCGCCC CTTGACATCTTCATCTGTTCAATCGGCCGTGACCGCGGGGCCGGCCGGCTCGGCCCGATACCGGTGCCCTCTCTC CTCGTCTGGGCTGTCAAGGGTCGCACGCTGGGGATGGAGAGGACGGTCAAGTATGCCAACGGCACCATGTGG |
| Transcript | >Ophio5|5427 ATGTCCAAGACGGTACTCATTCTCGGCGGCTCGCTCGGCGGCTTGGCCGTCGCTCACCAGCTGCTCAAGAAGACG CGCCCCCATGTCGAGCATCTCCGCGTCGTCCTCGTCTCCAAGAATAGCCATTTTTATTGGTGTCTTGCCTCTGTG CGGGCCGTCGTCCCCGGCCTCGTTCAAGACTCGCAGATCCTGCAGCCCATCGAGCCGGGACTGCGCCAATATCCG GAAGACAGCGTCGACTTCATCGTCGGTACCGCCTCCAAGATCGATGTGACGGCGAGACGAGTGCGCGTCTCCGTC TTCGAAGGAGCCGACCGCGAAATCAAATATGACTACCTCGTCATCGCCACGGGCGCCGACGCCGCAGTGAGGGAC ATGCCCTGGAAGGCGTCCGGCTCGTACGAAGACTGCCTCACCAGCTTACACCGCACCTCGGAACGCATCCGTACG GCAGAGCACATCGTCGTGGGCGGAGGCGGCGCCACGGGCGTCGAGCTGGCCGCCGAGATCAAGCACGAGTTTCCA TCCAAGACGGTCGTGATCCTCAACTCCTCCGATCATCTCGTCGCCGGCGATTCCTCTGCTGCGAGTATCGAGCGC GAGCTGCTACGCCTCGGCGTCGTCGTCACCAAGGGCGTGCGCGGGGATCCCTCCGACGACGCCCCGAGACCAGAT GGAAAGACGGTTGTCCACCTATCAGACGGCAGTTATTTACTTACTGATCTCTATCTGCCCACTACCGGCCTCTCA CCCAATACGAGCTTCTTGCCCAGCGGCTGGCTGACGGACGGCGGCTACGTCCAAGTCGACGAGTGCATGCGCGTC ACTGGCGCATCTGACATCTGGGCCTTGGGCGACGTCGTGTCCAAGCCGCGGGCCGGCTTCCTCATCACCGAGGCT CAGGCCGCCGGCGTCGCCAGGAACATTGGTCTGGTACTGCAGGGTAAGGACCAGCGCTCCGTCAGTGGTCCGCCC CTTGACATCTTCATCTGTTCAATCGGCCGTGACCGCGGGGCCGGCCGGCTCGGCCCGATACCGGTGCCCTCTCTC CTCGTCTGGGCTGTCAAGGGTCGCACGCTGGGGATGGAGAGGACGGTCAAGTATGCCAACGGCACCATGTGGTAA |
| Gene | >Ophio5|5427 ATGTCCAAGACGGTACTCATTCTCGGCGGCTCGCTCGGCGGCTTGGCCGTCGCTCACCAGCTGCTCAAGAAGACG CGCCCCCATGTCGAGCATCTCCGCGTCGTCCTCGTCTCCAAGGTGAGCGGTCCTGCCATCTTGTCACCGTCAGAC GAGACGCTGACGCTATTATAGAATAGCCATTTTTATTGGTGTCTTGCCTCTGTGCGGGCCGTCGTCCCCGGCCTC GTTCAAGACTCGCAGATCCTGCAGCCCATCGAGCCGGGACTGCGCCAATATCCGGAAGACAGCGTCGACTTCATC GTCGGTACCGCCTCCAAGATCGATGTGACGGCGAGACGAGTGCGCGTCTCCGTCTTCGAAGGAGCCGACCGCGAA ATCAAATATGACTACCTCGTCATCGCCACGGGCGCCGACGCCGCAGTGAGGGACATGCCCTGGAAGGCGTCCGGC TCGTACGAAGACTGCCTCACCAGCTTACACCGCACCTCGGAACGCATCCGTACGGCAGAGCACATCGTCGTGGGC GGAGGCGGCGCCACGGGCGTCGAGCTGGCCGCCGAGATCAAGCACGAGTTTCCATCCAAGACGGTCGTGATCCTC AACTCCTCCGATCATCTCGTCGCCGGCGATTCCTCTGCTGCGAGTATCGAGCGCGAGCTGCTACGCCTCGGCGTC GTCGTCACCAAGGGCGTGCGCGGGGATCCCTCCGACGACGCCCCGAGACCAGATGGAAAGACGGTTGTCCACCTA TCAGACGGCAGTTATTTACTTACTGATCTCTATCTGCCCACTACCGGCCTCTCACCCAATACGAGCTTCTTGCCC AGCGGCTGGCTGACGGACGGCGGCTACGTCCAAGTCGACGAGTGCATGCGCGTCACTGGCGCATCTGACATCTGG GCCTTGGGCGACGTCGTGTCCAAGCCGCGGGCCGGCTTCCTCATCACCGAGGCTCAGGTATGAAAAATTGTTGAA CCCCGTCTGGCGGTCGCGCGCTCGCAGCTGATCTTCTTGTCTTTGTCGCAGGCCGCCGGCGTCGCCAGGAACATT GGTCTGGTACTGCAGGGTAAGGACCAGCGCTCCGTCAGTGGTCCGCCCCTTGACATCTTCATCTGTTCAATCGGC CGTGACCGCGGGGCCGGCCGGCTCGGCCCGATACCGGTGCCCTCTCTCCTCGTCTGGGCTGTCAAGGGTCGCACG CTGGGGATGGAGAGGACGGTCAAGTATGCCAACGGCACCATGTGGTAA |