Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5410
Gene name
Locationscaffold_441:5672..7144
Strand-
Gene length (bp)1472
Transcript length (bp)1083
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 47 69 22
3 103 125 22
4 138 160 22
5 195 212 17
6 224 246 22
7 266 288 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5410
MAIQSGYYLEPVHNVAAGSVLSLLATVAVCLRFWTRIKYQQGLQADDWTILPAVLFTLGQGINIVYGVAKKALAT
RVLLPPGPVTGGFAAHTDQVLLMSKLKLAFVLMLPLAAGCIKLSFLFFYVRIFVVNKRRPIHIMLLTVIAIVALW
IAVCFLLTIFECRLDFWALWAPPSDIFEKCIDTFKAVYAMCLSDFLTDLLVIIIPVPLIWNLKMSTQKKIATSAV
FLLGIVAIAASLTRLIMTVQVIQHGFDADADVILTMTSYLYWGMVECALGVVAACLPSLAILGKGFSLQSAWASV
FRRWSRRRADASAVRSSDQEYKSQGSFRPLPPLKKMNGSSDTSWFSSKGSQESEDQVQDV
Coding >Ophio5|5410
ATGGCTATCCAGAGTGGCTACTACCTGGAGCCCGTTCACAATGTAGCTGCTGGCTCAGTCCTTTCTCTTCTAGCC
ACTGTCGCTGTATGTCTGAGATTTTGGACACGGATCAAGTACCAGCAGGGCCTCCAGGCCGATGACTGGACCATA
CTACCTGCCGTCCTCTTCACGCTAGGACAAGGCATTAATATAGTCTATGGGGTGGCCAAGAAGGCTCTAGCAACT
CGGGTTCTGCTGCCGCCAGGACCAGTCACCGGTGGCTTCGCAGCTCATACGGATCAAGTTCTGCTCATGTCTAAG
CTAAAACTGGCCTTTGTTTTGATGCTCCCGCTCGCTGCCGGTTGCATCAAACTCAGCTTTCTCTTTTTCTACGTG
CGCATCTTTGTAGTCAACAAGCGTCGCCCCATCCACATCATGCTACTCACCGTCATAGCCATTGTTGCACTTTGG
ATCGCGGTCTGTTTCCTCCTCACCATCTTTGAGTGCCGATTGGACTTTTGGGCTCTATGGGCCCCTCCCAGCGAT
ATCTTCGAAAAATGCATCGATACATTCAAGGCAGTGTATGCCATGTGCCTCAGTGACTTTCTCACGGACCTTCTC
GTTATTATCATCCCCGTGCCTCTGATCTGGAACTTGAAGATGTCTACGCAGAAGAAGATTGCTACCAGTGCCGTA
TTCCTGCTCGGAATTGTCGCCATTGCGGCTTCTCTAACACGCCTGATTATGACTGTTCAGGTCATACAGCACGGG
TTCGACGCCGATGCGGATGTCATACTGACCATGACGTCGTATCTATACTGGGGAATGGTCGAATGTGCCCTTGGA
GTTGTGGCCGCATGCCTCCCCTCGCTGGCCATCTTAGGTAAAGGGTTCTCTCTTCAGTCAGCCTGGGCGTCGGTC
TTCCGCCGTTGGTCCCGCCGAAGAGCCGATGCTTCGGCCGTCCGGTCGAGTGATCAAGAGTACAAGAGCCAAGGG
AGTTTCCGACCTCTGCCGCCCCTCAAGAAGATGAATGGATCGAGCGATACGTCGTGGTTCAGCAGCAAAGGGTCT
CAAGAGTCCGAGGACCAGGTCCAAGATGTG
Transcript >Ophio5|5410
ATGGCTATCCAGAGTGGCTACTACCTGGAGCCCGTTCACAATGTAGCTGCTGGCTCAGTCCTTTCTCTTCTAGCC
ACTGTCGCTGTATGTCTGAGATTTTGGACACGGATCAAGTACCAGCAGGGCCTCCAGGCCGATGACTGGACCATA
CTACCTGCCGTCCTCTTCACGCTAGGACAAGGCATTAATATAGTCTATGGGGTGGCCAAGAAGGCTCTAGCAACT
CGGGTTCTGCTGCCGCCAGGACCAGTCACCGGTGGCTTCGCAGCTCATACGGATCAAGTTCTGCTCATGTCTAAG
CTAAAACTGGCCTTTGTTTTGATGCTCCCGCTCGCTGCCGGTTGCATCAAACTCAGCTTTCTCTTTTTCTACGTG
CGCATCTTTGTAGTCAACAAGCGTCGCCCCATCCACATCATGCTACTCACCGTCATAGCCATTGTTGCACTTTGG
ATCGCGGTCTGTTTCCTCCTCACCATCTTTGAGTGCCGATTGGACTTTTGGGCTCTATGGGCCCCTCCCAGCGAT
ATCTTCGAAAAATGCATCGATACATTCAAGGCAGTGTATGCCATGTGCCTCAGTGACTTTCTCACGGACCTTCTC
GTTATTATCATCCCCGTGCCTCTGATCTGGAACTTGAAGATGTCTACGCAGAAGAAGATTGCTACCAGTGCCGTA
TTCCTGCTCGGAATTGTCGCCATTGCGGCTTCTCTAACACGCCTGATTATGACTGTTCAGGTCATACAGCACGGG
TTCGACGCCGATGCGGATGTCATACTGACCATGACGTCGTATCTATACTGGGGAATGGTCGAATGTGCCCTTGGA
GTTGTGGCCGCATGCCTCCCCTCGCTGGCCATCTTAGGTAAAGGGTTCTCTCTTCAGTCAGCCTGGGCGTCGGTC
TTCCGCCGTTGGTCCCGCCGAAGAGCCGATGCTTCGGCCGTCCGGTCGAGTGATCAAGAGTACAAGAGCCAAGGG
AGTTTCCGACCTCTGCCGCCCCTCAAGAAGATGAATGGATCGAGCGATACGTCGTGGTTCAGCAGCAAAGGGTCT
CAAGAGTCCGAGGACCAGGTCCAAGATGTGTGA
Gene >Ophio5|5410
ATGGCTATCCAGAGTGGCTACTACCTGGAGCCCGTTCACAATGTAGCTGCTGGCTCAGTCCTTTCTCTTCTAGCC
ACTGTCGCTGTATGTCTGAGATTTTGGACACGGATCAAGTACCAGCAGGGCCTCCAGGCCGATGACTGGACCATA
CTACCTGCCGTCGTGAGTTTTCCCATCCCCATTCTCGATGACTGGTATCTGGCGAAACCTTGAATCGCCGTCTCT
CACGAGATACCGGGCTCCTATCTCGGGTCAACAACGAGATGCTAATAAAGTTGCCCGGACAGCTCTTCACGCTAG
GACAAGGCATTAATATAGTCTATGGGGTGGCCAAGAAGGCTCTAGCAACTCGGGTTCTGCTGCCGCCAGGACCAG
TCACCGGTGGCTTCGCAGCTCATACGGATCAAGTTCTGCTCATGTCTAAGGTATGGAATCCTCGTATCGTCCAGG
TGGTCGGATAACAAGAGCCTTCACAATCGTTAACGCCCGAGACGCGCGTCACAGCTAAAACTGGCCTTTGTTTTG
ATGCTCCCGCTCGCTGCCGGTTGCATCAAACTCAGCTTTCTCTTTTTCTACGTGCGCATCTTTGTAGTCAACAAG
CGTCGCCCCATCCACATCATGCTACTCACCGTCATAGCCATTGTTGCACTTTGGATCGCGGTCTGTTTCCTCCTC
ACCATCTTTGAGTGCCGATTGGACTTTTGGGCTCTATGGGCCCCTCCCAGCGATATCTTCGAAAAATGCATCGAT
ACATTCAAGGCAGTGTATGCCATGTGCCTCAGTGACTTTCTCACGGACCTTCTCGTTATTATCATCCCCGTGCCT
CTGGCAAGTATTCCCCCTGTCTCTTCATGAGGAGGCTCCGCGAACTGACGCAGTACTTGGTAGATCTGGAACTTG
AAGATGTCTACGCAGAAGAAGATTGCTACCAGTGCCGTATTCCTGCTCGGAATTGTGTGAGGATTGACCAGAGAT
TCCAGTCAGACTTCAAGGGAGGTGACGGCTGACTTGTACGATATTCCTCAGCGCCATTGCGGCTTCTCTAACACG
CCTGATTATGACTGTTCAGGTCATACAGCACGGGTTCGACGCCGATGCGGATGTCATACGTGCGGCTTCCTCACT
CTACCAGGAACATGATACAAAGCAGCTAATGTTGTTTAGTGACCATGACGTCGTATCTATACTGGGGAATGGTCG
AATGTGCCCTTGGAGTTGTGGCCGCATGCCTCCCCTCGCTGGCCATCTTAGGTAAAGGGTTCTCTCTTCAGTCAG
CCTGGGCGTCGGTCTTCCGCCGTTGGTCCCGCCGAAGAGCCGATGCTTCGGCCGTCCGGTCGAGTGATCAAGAGT
ACAAGAGCCAAGGGAGTTTCCGACCTCTGCCGCCCCTCAAGAAGATGAATGGATCGAGCGATACGTCGTGGTTCA
GCAGCAAAGGGTCTCAAGAGTCCGAGGACCAGGTCCAAGATGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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