Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5402
Gene name
Locationscaffold_44:55998..57595
Strand+
Gene length (bp)1597
Transcript length (bp)1383
Coding sequence length (bp)1380
Protein length (aa) 460

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16010 CDH-cyt Cytochrome domain of cellobiose dehydrogenase 2.6E-22 24 184
PF03188 Cytochrom_B561 Eukaryotic cytochrome b561 2.5E-08 243 340
PF10348 DUF2427 Domain of unknown function (DUF2427) 2.0E-05 219 304

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q0WRW8|B561K_ARATH Cytochrome b561 and DOMON domain-containing protein At3g07570 OS=Arabidopsis thaliana GN=At3g07570 PE=2 SV=1 141 364 2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 220 242 22
2 249 271 22
3 281 303 22
4 323 340 17
5 350 369 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5402
MRLLHMTLAAAAAAAAVAAQQSTFLSPSRDLAFALSVPDTDNTDIFFSIRAPINYAWAAVGLGSDDMKGALFLVI
YRNKHRDNVTLSPRLAYGNYEPQHYPEMQYDVLPGTGIVDDHMVFNARCTQHCRSWPAVDSNSGYLDVSSPTEKA
IYALGPRSGFGSDNPAADLQFHREFGVFTIDIKRTLGAPDPPTLADNSVAVGTSLEYHNTHRRDHRSGLHGTFMV
FAVVILLPVGAALRHLGRWARYHVLCQSTAVAIMLGGVATGVLTSLRYQRSRNFRSPHQILGFIVIGFVLVQLAL
GFLHRRKNIKTHAPTEYGKYHRYLGGIIIVFGTLNAFFGFDLALDYKVGYALCAIVIVTIFVGLFFYLGRQGLRE
KHQRLAAAGGPHGAAPTGYQPQPWREDNPDGSPREAPPSYDASSSQHIGLQPVSAQPSPWRSSDVKDGGDDQPAL
GGAQHPREFA
Coding >Ophio5|5402
ATGAGGCTGCTGCATATGACTCTGGCTGCTGCTGCTGCAGCAGCTGCTGTGGCAGCTCAACAGTCCACCTTTCTC
TCCCCCAGCCGCGACCTCGCCTTCGCCCTCTCCGTTCCCGACACCGACAACACAGACATCTTCTTCAGCATCCGC
GCCCCCATCAACTATGCCTGGGCCGCCGTCGGCCTTGGTAGTGACGACATGAAAGGCGCCCTCTTCCTCGTCATC
TACCGTAACAAACATCGCGACAACGTCACCCTCTCTCCGCGCCTGGCCTATGGCAACTATGAGCCTCAGCATTAC
CCGGAGATGCAGTACGATGTTCTTCCCGGCACCGGTATCGTCGATGATCACATGGTCTTCAACGCTCGCTGCACA
CAACATTGCCGCAGCTGGCCTGCTGTCGACTCTAATAGTGGCTATCTGGACGTCTCGTCGCCGACGGAAAAGGCC
ATCTATGCCCTCGGGCCACGCAGCGGCTTTGGCAGCGATAATCCCGCAGCTGATCTGCAGTTTCATCGCGAGTTT
GGAGTCTTTACCATCGATATCAAGCGGACTCTTGGTGCTCCCGATCCGCCCACACTGGCTGACAACTCTGTCGCC
GTCGGCACTTCGCTCGAGTACCACAACACCCACCGCCGTGACCACCGCTCTGGTCTGCACGGTACTTTTATGGTC
TTTGCCGTCGTCATCCTTTTGCCTGTTGGCGCAGCTCTCCGCCATCTCGGACGCTGGGCTCGCTATCATGTCCTC
TGTCAGTCTACGGCCGTCGCCATTATGCTCGGCGGTGTCGCTACTGGCGTCTTGACCAGTCTCCGCTATCAGAGG
TCGCGAAATTTCCGCTCCCCCCATCAGATCCTCGGCTTCATCGTCATCGGCTTCGTCCTCGTCCAGCTGGCCCTC
GGCTTCCTCCATCGCCGGAAGAATATCAAGACACATGCGCCGACCGAGTACGGCAAGTACCATCGCTATCTGGGT
GGCATCATCATCGTCTTTGGCACCCTCAATGCCTTCTTTGGTTTCGACCTTGCCCTCGACTACAAGGTTGGCTAC
GCGCTGTGCGCCATCGTCATCGTCACCATCTTTGTCGGCCTCTTCTTTTACCTCGGACGCCAAGGTTTACGGGAG
AAGCACCAGCGGCTGGCGGCGGCGGGCGGCCCACACGGCGCCGCGCCTACGGGCTACCAGCCGCAGCCATGGCGA
GAAGACAACCCCGACGGCAGTCCGAGAGAGGCGCCGCCGAGCTACGACGCCTCTTCTTCGCAGCACATCGGTCTT
CAGCCAGTCTCGGCGCAGCCTTCGCCCTGGCGCAGCTCCGACGTCAAGGACGGTGGGGACGACCAGCCGGCGCTG
GGCGGGGCGCAACATCCGAGGGAGTTTGCT
Transcript >Ophio5|5402
ATGAGGCTGCTGCATATGACTCTGGCTGCTGCTGCTGCAGCAGCTGCTGTGGCAGCTCAACAGTCCACCTTTCTC
TCCCCCAGCCGCGACCTCGCCTTCGCCCTCTCCGTTCCCGACACCGACAACACAGACATCTTCTTCAGCATCCGC
GCCCCCATCAACTATGCCTGGGCCGCCGTCGGCCTTGGTAGTGACGACATGAAAGGCGCCCTCTTCCTCGTCATC
TACCGTAACAAACATCGCGACAACGTCACCCTCTCTCCGCGCCTGGCCTATGGCAACTATGAGCCTCAGCATTAC
CCGGAGATGCAGTACGATGTTCTTCCCGGCACCGGTATCGTCGATGATCACATGGTCTTCAACGCTCGCTGCACA
CAACATTGCCGCAGCTGGCCTGCTGTCGACTCTAATAGTGGCTATCTGGACGTCTCGTCGCCGACGGAAAAGGCC
ATCTATGCCCTCGGGCCACGCAGCGGCTTTGGCAGCGATAATCCCGCAGCTGATCTGCAGTTTCATCGCGAGTTT
GGAGTCTTTACCATCGATATCAAGCGGACTCTTGGTGCTCCCGATCCGCCCACACTGGCTGACAACTCTGTCGCC
GTCGGCACTTCGCTCGAGTACCACAACACCCACCGCCGTGACCACCGCTCTGGTCTGCACGGTACTTTTATGGTC
TTTGCCGTCGTCATCCTTTTGCCTGTTGGCGCAGCTCTCCGCCATCTCGGACGCTGGGCTCGCTATCATGTCCTC
TGTCAGTCTACGGCCGTCGCCATTATGCTCGGCGGTGTCGCTACTGGCGTCTTGACCAGTCTCCGCTATCAGAGG
TCGCGAAATTTCCGCTCCCCCCATCAGATCCTCGGCTTCATCGTCATCGGCTTCGTCCTCGTCCAGCTGGCCCTC
GGCTTCCTCCATCGCCGGAAGAATATCAAGACACATGCGCCGACCGAGTACGGCAAGTACCATCGCTATCTGGGT
GGCATCATCATCGTCTTTGGCACCCTCAATGCCTTCTTTGGTTTCGACCTTGCCCTCGACTACAAGGTTGGCTAC
GCGCTGTGCGCCATCGTCATCGTCACCATCTTTGTCGGCCTCTTCTTTTACCTCGGACGCCAAGGTTTACGGGAG
AAGCACCAGCGGCTGGCGGCGGCGGGCGGCCCACACGGCGCCGCGCCTACGGGCTACCAGCCGCAGCCATGGCGA
GAAGACAACCCCGACGGCAGTCCGAGAGAGGCGCCGCCGAGCTACGACGCCTCTTCTTCGCAGCACATCGGTCTT
CAGCCAGTCTCGGCGCAGCCTTCGCCCTGGCGCAGCTCCGACGTCAAGGACGGTGGGGACGACCAGCCGGCGCTG
GGCGGGGCGCAACATCCGAGGGAGTTTGCTTGA
Gene >Ophio5|5402
ATGAGGCTGCTGCATATGACTCTGGCTGCTGCTGCTGCAGCAGGTGAGCAGTCGTCTTCTTCTTCTTCTTCTCCT
CCACCGTCTTCGTCTCGTCCGGCGACAGAAAAGAAGAAGAAAAGAAAAGCAGGCTGACGATGCACAGCTGCTGTG
GCAGCTCAACAGTCCACCTTTCTCTCCCCCAGCCGCGACCTCGCCTTCGCCCTCTCCGTTCCCGACACCGACAAC
ACAGACATCTTCTTCAGCATCCGCGCCCCCATCAACTATGCCTGGGCCGCCGTCGGCCTTGGTAGTGACGACATG
AAAGGCGCCCTCTTCCTCGTCATCTACCGTAACAAACATCGCGACAACGTCACCCTCTCTCCGCGCCTGGCCTAT
GGCAACTATGAGCCTCAGCATTACCCGGAGATGCAGTACGATGTTCTTCCCGGCACCGGTATCGTCGATGATCAC
ATGGTCTTCAACGCTCGCTGCACACAACATTGCCGCAGCTGGCCTGCTGTCGACTCTAATAGTGGCTATCTGGAC
GTCTCGTCGCCGACGGAAAAGGCCATCTATGCCCTCGGGCCACGCAGCGGCTTTGGCAGCGATAATCCCGCAGCT
GATCTGCAGTTTCATCGCGAGTTTGGAGTCTTTACCATCGATATCAAGCGGACTCTTGGTGCTCCCGATCCGCCC
ACACTGGCTGACAACTCTGTCGCCGTCGGCACTTCGCTCGAGTACCACAACACCCACCGCCGTGACCACCGCTCT
GGTCTGCACGGTACTTTTATGGTCTTTGCCGTCGTCATCCTTTTGCCTGTTGGCGCAGCTCTCCGCCATCTCGGA
CGCTGGGCTCGCTATCATGTCCTCTGTCAGTCTACGGCCGTCGCCATTATGCTCGGCGGTGTCGCTACTGGCGTC
TTGACCAGTCTCCGCTATCAGAGGGTGTGTTGCCCCCTTTTCTCCCTTGCCGCGCACACACTGGCTTACATGGCA
CTAGTCGCGAAATTTCCGCTCCCCCCATCAGATCCTCGGCTTCATCGTCATCGGCTTCGTCCTCGTCCAGCTGGC
CCTCGGCTTCCTCCATCGCCGGAAGAATATCAAGACACATGCGCCGACCGAGTACGGCAAGTACCATCGCTATCT
GGGTGGCATCATCATCGTCTTTGGCACCCTCAATGCCTTCTTGTATGTCTTCTCCCCGCTTCCTTGGCTACGGCC
ATCCTTTACTCACTGGCAACCTCGCAGTGGTTTCGACCTTGCCCTCGACTACAAGGTTGGCTACGCGCTGTGCGC
CATCGTCATCGTCACCATCTTTGTCGGCCTCTTCTTTTACCTCGGACGCCAAGGTTTACGGGAGAAGCACCAGCG
GCTGGCGGCGGCGGGCGGCCCACACGGCGCCGCGCCTACGGGCTACCAGCCGCAGCCATGGCGAGAAGACAACCC
CGACGGCAGTCCGAGAGAGGCGCCGCCGAGCTACGACGCCTCTTCTTCGCAGCACATCGGTCTTCAGCCAGTCTC
GGCGCAGCCTTCGCCCTGGCGCAGCTCCGACGTCAAGGACGGTGGGGACGACCAGCCGGCGCTGGGCGGGGCGCA
ACATCCGAGGGAGTTTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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