Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5390
Gene name
Locationscaffold_44:13629..15284
Strand+
Gene length (bp)1655
Transcript length (bp)1587
Coding sequence length (bp)1584
Protein length (aa) 528

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 4.5E-34 94 455

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 34 528 3.0E-75
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 70 528 4.0E-73
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 36 527 7.0E-69
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 68 528 7.0E-67
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 43 528 3.0E-60
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 34 528 3.0E-75
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 70 528 4.0E-73
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 36 527 7.0E-69
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 68 528 7.0E-67
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 43 528 3.0E-60
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 71 377 1.0E-47
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 71 393 4.0E-47
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 64 528 7.0E-43
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 68 527 5.0E-38
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 49 526 6.0E-38
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 72 526 3.0E-37
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 68 471 4.0E-36
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 80 394 5.0E-34
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 71 377 9.0E-32
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 60 289 9.0E-32
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 71 527 2.0E-31
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 68 527 3.0E-31
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 72 485 1.0E-29
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 42 493 1.0E-28
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 48 524 4.0E-28
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 60 512 1.0E-27
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 47 456 5.0E-26
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 47 528 8.0E-25
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 49 524 3.0E-22
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 64 390 4.0E-18
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 47 285 1.0E-14
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 60 508 2.0E-14
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 82 459 3.0E-12
sp|Q46916|GUDP_ECOLI Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 69 377 1.0E-11
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 71 388 3.0E-09
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 71 388 3.0E-09
sp|P37489|YYBO_BACSU Uncharacterized transporter YybO OS=Bacillus subtilis (strain 168) GN=yybO PE=3 SV=1 60 373 1.0E-07
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 156 291 1.0E-07
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 88 377 3.0E-07
sp|P0AA80|GARP_ECOLI Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1 71 391 9.0E-07
sp|P0AA81|GARP_ECO57 Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1 71 391 9.0E-07
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 82 101 19
3 121 143 22
4 150 169 19
5 179 201 22
6 210 232 22
7 242 264 22
8 317 339 22
9 354 371 17
10 378 400 22
11 405 427 22
12 439 458 19
13 468 490 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5390
MQHVGPPALAYCLAPSASLALCSPSSALVSLLLSVSAQTSPQRAMAVDVKHRSSDESQWQENVECPPHTTERKLL
ARIDMHVVPFLCVMYLLAFLDRVNISNADLFGLSKDLDLGATSTKFNTALVIFFVPYCIFEIPSNILLKRFRPHV
WLALNMFLFGFTTMMQGLVQNYAGLLACRFFLGLFETGMFPGAFYLIGMWYRRHEAQKRYSFFFGSTTLAGAFGG
LLAAALGQMGGLRGFSGWRWIFLVEGAITVFVSFFFFFLLPDFPEDSTWLTAEEKEFVAARLRLDQGRSAVERAI
TMRDVVAVLSDPKVILGGFMYLGLIVPAYGYAYFSPFIITGYGYSPVQTQLHSVPPWAVAFVSAMLVAYFSDRLR
HRFSFAMASTLVCIVGFAILIAVRHHRDLQYGALFLFAAGAYTAMPIVVCWFNMNLGGHHRRSVGSAWQIGFGNL
GGIIAVFIFQKKDGPRFIPGLSIALAFAVLSIIACTLYAISCFKANRERTKPGQGSLELSEEEKTALGDKSPDYR
YLL
Coding >Ophio5|5390
ATGCAACACGTCGGCCCCCCGGCGCTGGCTTACTGTCTCGCGCCTAGTGCTTCTTTAGCTCTTTGCTCTCCCTCG
TCAGCCCTTGTCAGCCTCCTCCTCTCCGTCTCCGCACAAACGAGTCCTCAACGAGCCATGGCCGTCGACGTCAAG
CACAGGAGCTCCGACGAGAGTCAGTGGCAGGAGAATGTCGAGTGTCCGCCGCACACGACGGAGCGGAAGCTGTTG
GCTCGCATCGATATGCACGTCGTGCCTTTTCTATGCGTCATGTATCTCCTGGCCTTTCTTGACCGCGTCAACATC
TCCAACGCTGATCTCTTTGGCCTCTCCAAGGACCTCGACCTCGGCGCCACCAGCACCAAGTTCAACACGGCTCTC
GTCATCTTCTTCGTTCCCTACTGTATCTTCGAGATCCCCTCCAACATCCTGCTCAAGCGCTTCCGCCCACATGTC
TGGCTCGCCCTCAACATGTTCCTCTTCGGCTTTACCACCATGATGCAGGGCCTTGTCCAAAACTACGCCGGCCTG
CTCGCCTGTCGCTTCTTCCTCGGCCTCTTTGAGACGGGCATGTTCCCGGGCGCCTTCTATCTCATCGGCATGTGG
TACCGCCGCCACGAGGCCCAGAAGCGATACTCCTTCTTCTTCGGCAGCACCACGCTCGCCGGCGCCTTTGGTGGC
CTGCTCGCCGCCGCCCTCGGCCAGATGGGCGGCCTGCGTGGTTTCAGCGGCTGGCGCTGGATCTTCCTGGTCGAA
GGCGCCATCACCGTCTTCGTCAGCTTCTTCTTCTTCTTCCTGCTGCCCGACTTCCCCGAGGATTCGACCTGGTTG
ACGGCCGAGGAGAAGGAATTTGTCGCCGCCCGTCTCCGCCTCGATCAGGGGCGCTCTGCTGTTGAGCGCGCCATC
ACGATGCGCGATGTTGTCGCTGTTCTGTCCGACCCCAAGGTCATTCTCGGCGGCTTCATGTATCTCGGTCTCATC
GTGCCCGCCTACGGCTACGCCTACTTCTCACCCTTCATCATCACCGGCTATGGTTACAGTCCCGTCCAGACACAG
CTGCATAGCGTTCCCCCTTGGGCTGTCGCCTTTGTCTCCGCCATGCTGGTTGCCTACTTCTCGGACCGGCTGCGC
CATCGTTTCTCTTTTGCCATGGCCTCCACCCTCGTCTGCATCGTCGGCTTTGCCATCCTCATCGCCGTCCGCCAC
CACCGCGACCTGCAATACGGCGCCCTCTTCCTCTTCGCCGCCGGCGCTTACACCGCCATGCCCATCGTCGTCTGC
TGGTTCAACATGAACCTTGGCGGCCACCACCGCCGCTCCGTCGGCAGCGCCTGGCAGATTGGCTTCGGCAATCTC
GGCGGCATCATCGCCGTCTTCATTTTCCAGAAGAAGGATGGGCCCAGGTTCATCCCTGGCCTCAGTATCGCGCTG
GCCTTTGCCGTCCTGAGCATCATTGCGTGCACCCTCTACGCCATTTCTTGTTTCAAGGCCAACCGCGAGAGAACC
AAACCGGGCCAAGGCTCGCTCGAGCTGTCCGAGGAGGAAAAGACGGCGCTAGGCGACAAGTCCCCCGACTATCGC
TACCTCCTT
Transcript >Ophio5|5390
ATGCAACACGTCGGCCCCCCGGCGCTGGCTTACTGTCTCGCGCCTAGTGCTTCTTTAGCTCTTTGCTCTCCCTCG
TCAGCCCTTGTCAGCCTCCTCCTCTCCGTCTCCGCACAAACGAGTCCTCAACGAGCCATGGCCGTCGACGTCAAG
CACAGGAGCTCCGACGAGAGTCAGTGGCAGGAGAATGTCGAGTGTCCGCCGCACACGACGGAGCGGAAGCTGTTG
GCTCGCATCGATATGCACGTCGTGCCTTTTCTATGCGTCATGTATCTCCTGGCCTTTCTTGACCGCGTCAACATC
TCCAACGCTGATCTCTTTGGCCTCTCCAAGGACCTCGACCTCGGCGCCACCAGCACCAAGTTCAACACGGCTCTC
GTCATCTTCTTCGTTCCCTACTGTATCTTCGAGATCCCCTCCAACATCCTGCTCAAGCGCTTCCGCCCACATGTC
TGGCTCGCCCTCAACATGTTCCTCTTCGGCTTTACCACCATGATGCAGGGCCTTGTCCAAAACTACGCCGGCCTG
CTCGCCTGTCGCTTCTTCCTCGGCCTCTTTGAGACGGGCATGTTCCCGGGCGCCTTCTATCTCATCGGCATGTGG
TACCGCCGCCACGAGGCCCAGAAGCGATACTCCTTCTTCTTCGGCAGCACCACGCTCGCCGGCGCCTTTGGTGGC
CTGCTCGCCGCCGCCCTCGGCCAGATGGGCGGCCTGCGTGGTTTCAGCGGCTGGCGCTGGATCTTCCTGGTCGAA
GGCGCCATCACCGTCTTCGTCAGCTTCTTCTTCTTCTTCCTGCTGCCCGACTTCCCCGAGGATTCGACCTGGTTG
ACGGCCGAGGAGAAGGAATTTGTCGCCGCCCGTCTCCGCCTCGATCAGGGGCGCTCTGCTGTTGAGCGCGCCATC
ACGATGCGCGATGTTGTCGCTGTTCTGTCCGACCCCAAGGTCATTCTCGGCGGCTTCATGTATCTCGGTCTCATC
GTGCCCGCCTACGGCTACGCCTACTTCTCACCCTTCATCATCACCGGCTATGGTTACAGTCCCGTCCAGACACAG
CTGCATAGCGTTCCCCCTTGGGCTGTCGCCTTTGTCTCCGCCATGCTGGTTGCCTACTTCTCGGACCGGCTGCGC
CATCGTTTCTCTTTTGCCATGGCCTCCACCCTCGTCTGCATCGTCGGCTTTGCCATCCTCATCGCCGTCCGCCAC
CACCGCGACCTGCAATACGGCGCCCTCTTCCTCTTCGCCGCCGGCGCTTACACCGCCATGCCCATCGTCGTCTGC
TGGTTCAACATGAACCTTGGCGGCCACCACCGCCGCTCCGTCGGCAGCGCCTGGCAGATTGGCTTCGGCAATCTC
GGCGGCATCATCGCCGTCTTCATTTTCCAGAAGAAGGATGGGCCCAGGTTCATCCCTGGCCTCAGTATCGCGCTG
GCCTTTGCCGTCCTGAGCATCATTGCGTGCACCCTCTACGCCATTTCTTGTTTCAAGGCCAACCGCGAGAGAACC
AAACCGGGCCAAGGCTCGCTCGAGCTGTCCGAGGAGGAAAAGACGGCGCTAGGCGACAAGTCCCCCGACTATCGC
TACCTCCTTTGA
Gene >Ophio5|5390
ATGCAACACGTCGGCCCCCCGGCGCTGGCTTACTGTCTCGCGCCTAGTGCTTCTTTAGCTCTTTGCTCTCCCTCG
TCAGCCCTTGTCAGCCTCCTCCTCTCCGTCTCCGCACAAACGAGTCCTCAACGAGCCATGGCCGTCGACGTCAAG
CACAGGAGCTCCGACGAGAGTCAGTGGCAGGAGAATGTCGAGTGTCCGCCGCACACGACGGAGCGGAAGCTGTTG
GCTCGCATCGATATGCACGTCGTGCCTTTTCTATGCGTCATGTATCTCCTGGCCTTTCTTGGTGAGCCTTTTTTT
TTTGCTTCATGTTGAGCTTAAGAACAAGACCATCTGCTGACACGCCTCATCCAGACCGCGTCAACATCTCCAACG
CTGATCTCTTTGGCCTCTCCAAGGACCTCGACCTCGGCGCCACCAGCACCAAGTTCAACACGGCTCTCGTCATCT
TCTTCGTTCCCTACTGTATCTTCGAGATCCCCTCCAACATCCTGCTCAAGCGCTTCCGCCCACATGTCTGGCTCG
CCCTCAACATGTTCCTCTTCGGCTTTACCACCATGATGCAGGGCCTTGTCCAAAACTACGCCGGCCTGCTCGCCT
GTCGCTTCTTCCTCGGCCTCTTTGAGACGGGCATGTTCCCGGGCGCCTTCTATCTCATCGGCATGTGGTACCGCC
GCCACGAGGCCCAGAAGCGATACTCCTTCTTCTTCGGCAGCACCACGCTCGCCGGCGCCTTTGGTGGCCTGCTCG
CCGCCGCCCTCGGCCAGATGGGCGGCCTGCGTGGTTTCAGCGGCTGGCGCTGGATCTTCCTGGTCGAAGGCGCCA
TCACCGTCTTCGTCAGCTTCTTCTTCTTCTTCCTGCTGCCCGACTTCCCCGAGGATTCGACCTGGTTGACGGCCG
AGGAGAAGGAATTTGTCGCCGCCCGTCTCCGCCTCGATCAGGGGCGCTCTGCTGTTGAGCGCGCCATCACGATGC
GCGATGTTGTCGCTGTTCTGTCCGACCCCAAGGTCATTCTCGGCGGCTTCATGTATCTCGGTCTCATCGTGCCCG
CCTACGGCTACGCCTACTTCTCACCCTTCATCATCACCGGCTATGGTTACAGTCCCGTCCAGACACAGCTGCATA
GCGTTCCCCCTTGGGCTGTCGCCTTTGTCTCCGCCATGCTGGTTGCCTACTTCTCGGACCGGCTGCGCCATCGTT
TCTCTTTTGCCATGGCCTCCACCCTCGTCTGCATCGTCGGCTTTGCCATCCTCATCGCCGTCCGCCACCACCGCG
ACCTGCAATACGGCGCCCTCTTCCTCTTCGCCGCCGGCGCTTACACCGCCATGCCCATCGTCGTCTGCTGGTTCA
ACATGAACCTTGGCGGCCACCACCGCCGCTCCGTCGGCAGCGCCTGGCAGATTGGCTTCGGCAATCTCGGCGGCA
TCATCGCCGTCTTCATTTTCCAGAAGAAGGATGGGCCCAGGTTCATCCCTGGCCTCAGTATCGCGCTGGCCTTTG
CCGTCCTGAGCATCATTGCGTGCACCCTCTACGCCATTTCTTGTTTCAAGGCCAACCGCGAGAGAACCAAACCGG
GCCAAGGCTCGCTCGAGCTGTCCGAGGAGGAAAAGACGGCGCTAGGCGACAAGTCCCCCGACTATCGCTACCTCC
TTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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