© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|539 |
| Gene name | |
| Location | scaffold_113:38907..40267 |
| Strand | + |
| Gene length (bp) | 1360 |
| Transcript length (bp) | 1173 |
| Coding sequence length (bp) | 1170 |
| Protein length (aa) | 390 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02535 | Zip | ZIP Zinc transporter | 2.8E-26 | 130 | 382 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BFU1|S39A9_MOUSE | Zinc transporter ZIP9 OS=Mus musculus GN=Slc39a9 PE=2 SV=1 | 10 | 389 | 6.0E-46 |
| sp|Q9NUM3|S39A9_HUMAN | Zinc transporter ZIP9 OS=Homo sapiens GN=SLC39A9 PE=2 SV=2 | 10 | 389 | 6.0E-46 |
| sp|Q5ZIU9|S39A9_CHICK | Zinc transporter ZIP9 OS=Gallus gallus GN=SLC39A9 PE=2 SV=1 | 5 | 389 | 1.0E-45 |
| sp|Q3KR82|S39A9_RAT | Zinc transporter ZIP9 OS=Rattus norvegicus GN=Slc39a9 PE=2 SV=1 | 10 | 366 | 9.0E-44 |
| sp|Q640S1|S39A9_XENTR | Zinc transporter ZIP9 OS=Xenopus tropicalis GN=slc39a9 PE=2 SV=1 | 10 | 389 | 1.0E-43 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BFU1|S39A9_MOUSE | Zinc transporter ZIP9 OS=Mus musculus GN=Slc39a9 PE=2 SV=1 | 10 | 389 | 6.0E-46 |
| sp|Q9NUM3|S39A9_HUMAN | Zinc transporter ZIP9 OS=Homo sapiens GN=SLC39A9 PE=2 SV=2 | 10 | 389 | 6.0E-46 |
| sp|Q5ZIU9|S39A9_CHICK | Zinc transporter ZIP9 OS=Gallus gallus GN=SLC39A9 PE=2 SV=1 | 5 | 389 | 1.0E-45 |
| sp|Q3KR82|S39A9_RAT | Zinc transporter ZIP9 OS=Rattus norvegicus GN=Slc39a9 PE=2 SV=1 | 10 | 366 | 9.0E-44 |
| sp|Q640S1|S39A9_XENTR | Zinc transporter ZIP9 OS=Xenopus tropicalis GN=slc39a9 PE=2 SV=1 | 10 | 389 | 1.0E-43 |
| sp|Q6NRM1|S399B_XENLA | Zinc transporter ZIP9-B OS=Xenopus laevis GN=slc39a9-b PE=2 SV=1 | 10 | 389 | 2.0E-43 |
| sp|Q6NTL1|S399A_XENLA | Zinc transporter ZIP9-A OS=Xenopus laevis GN=slc39a9-a PE=2 SV=1 | 10 | 389 | 4.0E-43 |
| sp|Q5BL29|S39A9_DANRE | Zinc transporter ZIP9 OS=Danio rerio GN=slc39a9 PE=2 SV=1 | 18 | 389 | 3.0E-42 |
| sp|Q95JP5|S39A9_MACFA | Zinc transporter ZIP9 OS=Macaca fascicularis GN=SLC39A9 PE=2 SV=1 | 194 | 389 | 5.0E-32 |
| sp|Q5RE57|S39A9_PONAB | Zinc transporter ZIP9 OS=Pongo abelii GN=SLC39A9 PE=2 SV=1 | 208 | 389 | 1.0E-30 |
| sp|Q12067|ATX2_YEAST | Metal homeostasis factor ATX2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATX2 PE=1 SV=1 | 219 | 296 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0046873 | metal ion transmembrane transporter activity | Yes |
| GO:0030001 | metal ion transport | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0006812 | cation transport | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 26 | 22 |
| 2 | 33 | 55 | 22 |
| 3 | 142 | 161 | 19 |
| 4 | 214 | 233 | 19 |
| 5 | 243 | 265 | 22 |
| 6 | 278 | 297 | 19 |
| 7 | 312 | 329 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|539 MAGIILLLALCVVMALASFLAGALPLSMTLSQSQLRLISSIGVGVLVGTSLMIIIPEGIEAAATSTFPSSHHHRV RSLAQRAPWALAMETFHTAEPILVARDNPTEPLAPANRPDRIVPEIQTTSKQEQRESSHEEECHAEIPSFEVGFS MILGFVLMFLIDRLPRHATDTFHSAPSTTHMSLDNLSVDGAAADEEADSFLGSLTPTPRRARSLATTVGLVIHAM ADGIAMGASSATSDVNLGLVIFIAIMIHKAPAAFGLTSVLLRLGLSKRAARGHLIIFSLAAPAGAVATWLLIKLL GGGHLEGDGGHWWTGMLLLFSGGTFLYVAMHAMQEDGASHHHDHGSGANGYADGTSVYPRKPRGPQMRETLATVA GMFLPLLTQFGHHHH |
| Coding | >Ophio5|539 ATGGCTGGCATCATTCTACTCCTCGCACTATGCGTGGTCATGGCCTTGGCCTCATTTCTCGCGGGAGCTTTACCG CTTTCCATGACGCTTTCGCAATCGCAGCTACGCCTCATCTCTAGCATCGGCGTCGGCGTCCTCGTCGGCACCTCA CTCATGATCATAATACCCGAGGGAATCGAGGCGGCCGCCACGTCCACGTTTCCGTCGTCGCATCACCACCGAGTG AGGAGCTTGGCGCAAAGGGCTCCCTGGGCATTAGCCATGGAGACGTTCCATACTGCTGAGCCCATACTAGTGGCG CGAGACAACCCGACCGAACCGCTCGCTCCCGCCAACCGCCCCGATCGAATCGTTCCCGAGATACAGACGACAAGC AAGCAGGAGCAACGAGAGAGCTCGCATGAAGAGGAGTGCCACGCCGAGATCCCGTCATTTGAAGTCGGCTTCTCC ATGATTTTGGGCTTCGTCCTCATGTTCCTCATCGACAGGCTTCCCAGGCACGCGACGGATACTTTCCACTCGGCC CCTTCAACAACGCACATGAGCCTGGATAACCTAAGCGTCGACGGTGCGGCGGCCGACGAAGAGGCTGACAGTTTC CTCGGCTCCTTGACGCCGACCCCCCGACGAGCTCGCAGCCTGGCGACGACGGTGGGATTGGTGATCCACGCCATG GCCGACGGCATCGCCATGGGGGCGTCCTCGGCCACTTCAGACGTCAATCTCGGGCTCGTCATCTTCATTGCCATT ATGATTCACAAGGCGCCCGCCGCCTTTGGGCTGACGTCGGTACTCCTCCGGCTGGGGCTGTCGAAGCGGGCGGCG CGCGGTCACCTCATCATCTTCAGCCTCGCCGCGCCGGCCGGTGCGGTGGCAACATGGCTCTTAATCAAGCTGCTC GGCGGCGGCCACCTCGAAGGCGACGGCGGGCATTGGTGGACCGGCATGTTGCTACTTTTCTCCGGGGGGACTTTT TTGTACGTGGCCATGCATGCGATGCAGGAGGACGGAGCATCGCATCATCACGATCACGGCTCCGGCGCCAATGGC TACGCCGACGGCACTTCTGTCTATCCGCGCAAGCCAAGGGGGCCGCAGATGCGCGAGACGCTGGCCACGGTCGCC GGCATGTTTCTGCCGCTACTGACGCAATTTGGCCATCACCACCAC |
| Transcript | >Ophio5|539 ATGGCTGGCATCATTCTACTCCTCGCACTATGCGTGGTCATGGCCTTGGCCTCATTTCTCGCGGGAGCTTTACCG CTTTCCATGACGCTTTCGCAATCGCAGCTACGCCTCATCTCTAGCATCGGCGTCGGCGTCCTCGTCGGCACCTCA CTCATGATCATAATACCCGAGGGAATCGAGGCGGCCGCCACGTCCACGTTTCCGTCGTCGCATCACCACCGAGTG AGGAGCTTGGCGCAAAGGGCTCCCTGGGCATTAGCCATGGAGACGTTCCATACTGCTGAGCCCATACTAGTGGCG CGAGACAACCCGACCGAACCGCTCGCTCCCGCCAACCGCCCCGATCGAATCGTTCCCGAGATACAGACGACAAGC AAGCAGGAGCAACGAGAGAGCTCGCATGAAGAGGAGTGCCACGCCGAGATCCCGTCATTTGAAGTCGGCTTCTCC ATGATTTTGGGCTTCGTCCTCATGTTCCTCATCGACAGGCTTCCCAGGCACGCGACGGATACTTTCCACTCGGCC CCTTCAACAACGCACATGAGCCTGGATAACCTAAGCGTCGACGGTGCGGCGGCCGACGAAGAGGCTGACAGTTTC CTCGGCTCCTTGACGCCGACCCCCCGACGAGCTCGCAGCCTGGCGACGACGGTGGGATTGGTGATCCACGCCATG GCCGACGGCATCGCCATGGGGGCGTCCTCGGCCACTTCAGACGTCAATCTCGGGCTCGTCATCTTCATTGCCATT ATGATTCACAAGGCGCCCGCCGCCTTTGGGCTGACGTCGGTACTCCTCCGGCTGGGGCTGTCGAAGCGGGCGGCG CGCGGTCACCTCATCATCTTCAGCCTCGCCGCGCCGGCCGGTGCGGTGGCAACATGGCTCTTAATCAAGCTGCTC GGCGGCGGCCACCTCGAAGGCGACGGCGGGCATTGGTGGACCGGCATGTTGCTACTTTTCTCCGGGGGGACTTTT TTGTACGTGGCCATGCATGCGATGCAGGAGGACGGAGCATCGCATCATCACGATCACGGCTCCGGCGCCAATGGC TACGCCGACGGCACTTCTGTCTATCCGCGCAAGCCAAGGGGGCCGCAGATGCGCGAGACGCTGGCCACGGTCGCC GGCATGTTTCTGCCGCTACTGACGCAATTTGGCCATCACCACCACTGA |
| Gene | >Ophio5|539 ATGGCTGGCATCATTCTACTCCTCGCACTATGCGTCAGTCTGCTCGCCATCCAGCTCCTGCACCCCCCCCCCCCC CCTTTTGCCTCGACTGACGGCGTCGTACAGGTGGTCATGGCCTTGGCGTAGGCATCGTGATTCCTCGGAGCTGCC AGTTTGGGGAGCTGACGTCTGCCGCAGCTCATTTCTCGCGGGAGCTTTACCGCTTTCCATGACGCTTTCGCAATC GCAGCTACGCCTCATCTCTAGCATCGGCGTCGGCGTCCTCGTCGGCACCTCACTCATGATCATAATACCCGAGGG AATCGAGGCGGCCGCCACGTCCACGTTTCCGTCGTCGCATCACCACCGAGTGAGGAGCTTGGCGCAAAGGGCTCC CTGGGCATTAGCCATGGAGACGTTCCATACTGCTGAGCCCATACTAGTGGCGCGAGACAACCCGACCGAACCGCT CGCTCCCGCCAACCGCCCCGATCGAATCGTTCCCGAGATACAGACGACAAGCAAGCAGGAGCAACGAGAGAGCTC GCATGAAGAGGAGTGCCACGCCGAGATCCCGTCATTTGAAGTCGGCTTCTCCATGATTTTGGGCTTCGTCCTCAT GTTCCTCATCGACAGGCTTCCCAGGCACGCGACGGATACTTTCCACTCGGCCCCTTCAACAACGCACATGAGCCT GGATAACCTAAGCGTCGACGGTGCGGCGGCCGACGAAGAGGCTGACAGTTTCCTCGGCTCCTTGACGCCGACCCC CCGACGAGCTCGCAGCCTGGCGACGACGGTGGGATTGGTGATCCACGCCATGGCCGACGGCATCGCCATGGGGGC GTCCTCGGCCACTTCAGACGTCAATCTCGGGCTCGTCATCTTCATTGCCATTATGATTCACAAGGCGCCCGCCGC CTTTGGGCTGACGTCGGTACTCCTCCGGCTGGGGCTGTCGAAGCGGGCGGCGCGCGGTCACCTCATCATCTTCAG CCTCGCCGCGCCGGCCGGTGCGGTGGCAACATGGCTCTTAATCAAGCTGCTCGGCGGCGGCCACCTCGAAGGCGA CGGCGGGCATTGGTGGACCGGCATGTTGCTACTTTTCTCCGGGGGGACTTTTTTGTGAGTTCAAGAGCCAGTCTG GTTTATAGGACGCCGGCTAACGGGACGCGTTCGCAACAGGTACGTGGCCATGCATGCGATGCAGGAGGACGGAGC ATCGCATCATCACGATCACGGCTCCGGCGCCAATGGCTACGCCGACGGCACTTCTGTCTATCCGCGCAAGCCAAG GGGGCCGCAGATGCGCGAGACGCTGGCCACGGTCGCCGGCATGTTTCTGCCGCTACTGACGCAATTTGGCCATCA CCACCACTGA |