© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5362 |
| Gene name | |
| Location | scaffold_437:3476..4883 |
| Strand | + |
| Gene length (bp) | 1407 |
| Transcript length (bp) | 1311 |
| Coding sequence length (bp) | 1308 |
| Protein length (aa) | 436 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09751 | Es2 | Nuclear protein Es2 | 2.0E-105 | 30 | 401 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O44424|DGC14_DROME | Protein DGCR14 homolog OS=Drosophila melanogaster GN=Es2 PE=1 SV=2 | 7 | 433 | 2.0E-18 |
| sp|Q96DF8|DGC14_HUMAN | Protein DGCR14 OS=Homo sapiens GN=DGCR14 PE=1 SV=1 | 33 | 372 | 2.0E-12 |
| sp|O70279|DGC14_MOUSE | Protein DGCR14 OS=Mus musculus GN=Dgcr14 PE=1 SV=2 | 33 | 327 | 5.0E-12 |
| sp|P34420|DGC14_CAEEL | ES2 similar protein 2 OS=Caenorhabditis elegans GN=ess-2 PE=3 SV=2 | 25 | 404 | 1.0E-11 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5362 MEPTSQALVRKRADSELMPPPPTAKKVKRPKDVLSEDDYTASISHIILRDFFPGITVSAVQHEYLDAVESRNSTW IASAGQRLHDAMTPGRWRAQSAAVRSHDRGPTPASFVADTPSTAASPAVEEKPLPGSHMRLSDFQAKYTSEDNES FYKLLDKQNQKKTEKYAWMWNNNKLPSKQMLKQKEVVDRLSKSRNIVDDGFKRDRLAIKDSDERPARPDSWKAAP RNGFMFEPEGLDEGVVTVAQKAEEASRMPPKTIIYDNTRIPEPYAPDRPPSPTLSSIRDAIAGRPRPQDRDTSDV GGGETPRVNGYTFVDDDDDEPVFADSPPAISLGPGDAHNPFRLQQLRKRESLHERLVERIAKTNKESSRHGLSGR PELQHVPKFPSSPRKTGDFTPAAQRLLNKMGTPKGRTPGSPFDHFATPNGTISSADEPTEM |
| Coding | >Ophio5|5362 ATGGAACCGACGTCGCAGGCTCTGGTGCGAAAAAGGGCCGACTCAGAATTGATGCCTCCTCCGCCTACAGCCAAG AAAGTAAAAAGACCCAAGGATGTCCTGAGCGAAGACGACTACACGGCTTCAATCTCGCACATAATTCTGAGGGAC TTTTTCCCCGGCATCACGGTCTCTGCCGTGCAACACGAGTACCTGGATGCGGTCGAATCTCGGAATTCTACCTGG ATCGCGAGCGCGGGCCAGAGGCTGCACGATGCCATGACACCAGGCCGATGGCGAGCTCAGTCCGCCGCTGTACGC TCTCACGACCGCGGGCCGACCCCAGCCTCGTTCGTCGCGGACACACCAAGCACGGCGGCTTCCCCTGCCGTTGAG GAGAAGCCCTTACCAGGCTCCCACATGAGACTTTCCGACTTCCAGGCCAAATACACGAGCGAGGACAACGAGAGC TTCTACAAACTGTTGGACAAGCAGAATCAAAAGAAGACGGAGAAATATGCCTGGATGTGGAACAACAATAAGCTG CCCTCAAAGCAGATGCTGAAGCAAAAGGAAGTTGTAGATCGGCTCAGCAAATCGCGTAATATCGTCGACGACGGA TTCAAGCGCGATCGCCTGGCCATCAAGGACTCGGACGAGCGTCCGGCAAGGCCTGACTCCTGGAAAGCCGCGCCG AGAAATGGCTTTATGTTCGAACCGGAAGGATTAGACGAGGGTGTCGTCACCGTCGCTCAAAAGGCCGAAGAGGCG TCCCGAATGCCACCAAAAACCATCATCTATGACAATACTAGGATTCCGGAACCGTACGCTCCGGATCGACCTCCC TCGCCCACCCTATCCTCGATTCGGGACGCCATCGCGGGAAGGCCGCGCCCACAAGATCGGGACACTAGCGACGTT GGCGGGGGGGAGACGCCCAGAGTCAACGGCTACACGTTTGTCGACGACGATGATGACGAGCCAGTCTTTGCGGAC TCTCCGCCTGCCATTAGCCTGGGCCCAGGCGACGCACACAACCCCTTCAGGTTACAGCAGCTGAGGAAGCGGGAG TCGCTACACGAACGACTGGTGGAGCGGATAGCCAAAACCAACAAAGAGTCTTCTCGCCATGGGCTCAGCGGAAGG CCTGAGTTGCAGCACGTCCCAAAGTTCCCCAGCAGCCCTCGAAAAACCGGAGATTTCACACCAGCGGCACAGAGA CTGCTCAATAAAATGGGGACACCGAAAGGCAGGACGCCCGGCAGCCCCTTTGACCACTTTGCCACACCAAACGGC ACAATTAGCTCGGCCGACGAGCCCACGGAAATG |
| Transcript | >Ophio5|5362 ATGGAACCGACGTCGCAGGCTCTGGTGCGAAAAAGGGCCGACTCAGAATTGATGCCTCCTCCGCCTACAGCCAAG AAAGTAAAAAGACCCAAGGATGTCCTGAGCGAAGACGACTACACGGCTTCAATCTCGCACATAATTCTGAGGGAC TTTTTCCCCGGCATCACGGTCTCTGCCGTGCAACACGAGTACCTGGATGCGGTCGAATCTCGGAATTCTACCTGG ATCGCGAGCGCGGGCCAGAGGCTGCACGATGCCATGACACCAGGCCGATGGCGAGCTCAGTCCGCCGCTGTACGC TCTCACGACCGCGGGCCGACCCCAGCCTCGTTCGTCGCGGACACACCAAGCACGGCGGCTTCCCCTGCCGTTGAG GAGAAGCCCTTACCAGGCTCCCACATGAGACTTTCCGACTTCCAGGCCAAATACACGAGCGAGGACAACGAGAGC TTCTACAAACTGTTGGACAAGCAGAATCAAAAGAAGACGGAGAAATATGCCTGGATGTGGAACAACAATAAGCTG CCCTCAAAGCAGATGCTGAAGCAAAAGGAAGTTGTAGATCGGCTCAGCAAATCGCGTAATATCGTCGACGACGGA TTCAAGCGCGATCGCCTGGCCATCAAGGACTCGGACGAGCGTCCGGCAAGGCCTGACTCCTGGAAAGCCGCGCCG AGAAATGGCTTTATGTTCGAACCGGAAGGATTAGACGAGGGTGTCGTCACCGTCGCTCAAAAGGCCGAAGAGGCG TCCCGAATGCCACCAAAAACCATCATCTATGACAATACTAGGATTCCGGAACCGTACGCTCCGGATCGACCTCCC TCGCCCACCCTATCCTCGATTCGGGACGCCATCGCGGGAAGGCCGCGCCCACAAGATCGGGACACTAGCGACGTT GGCGGGGGGGAGACGCCCAGAGTCAACGGCTACACGTTTGTCGACGACGATGATGACGAGCCAGTCTTTGCGGAC TCTCCGCCTGCCATTAGCCTGGGCCCAGGCGACGCACACAACCCCTTCAGGTTACAGCAGCTGAGGAAGCGGGAG TCGCTACACGAACGACTGGTGGAGCGGATAGCCAAAACCAACAAAGAGTCTTCTCGCCATGGGCTCAGCGGAAGG CCTGAGTTGCAGCACGTCCCAAAGTTCCCCAGCAGCCCTCGAAAAACCGGAGATTTCACACCAGCGGCACAGAGA CTGCTCAATAAAATGGGGACACCGAAAGGCAGGACGCCCGGCAGCCCCTTTGACCACTTTGCCACACCAAACGGC ACAATTAGCTCGGCCGACGAGCCCACGGAAATGTGA |
| Gene | >Ophio5|5362 ATGGAACCGACGTCGCAGGCTCTGGTGCGAAAAAGGGCCGACTCAGAATTGATGCCTCCTCCGCCTACAGCCAAG AAAGTAAAAAGACCCAAGGATGTCCTGAGCGAAGACGACTACACGGCTTCAATCTCGCACATAATTCTGAGGGAC TTTTTCCCCGGCATCACGGTCTCTGCCGTGCAACACGAGTACCTGGATGCGGTCGAATCTCGGAATTCTACCTGG ATCGCGAGCGCGGGCCAGAGGCTGCACGATGCCATGACACCAGGCCGATGGCGAGCTCAGTCCGCCGCTGTACGC TCTCACGACCGCGGGCCGACCCCAGCCTCGTTCGTCGCGGACACACCAAGCACGGCGGCTTCCCCTGCCGTTGAG GAGAAGCCCTTACCAGGCTCCCACATGAGACTTTCCGACTTCCAGGCCAAATACACGAGCGAGGACAACGAGAGC TTCTACAAACTGTTGGACAAGCAGAATCAAAAGAAGACGGAGAAATATGCCTGGATGTGGAACAACAATAAGCTG CCCTCAAAGCAGATGCTGAAGCAAAAGGAAGTTGTAGATCGGCTCAGCAAATCGCGTAATATCGTCGACGACGGA TTCAAGCGCGATCGCCTGGCCATCAAGGACTCGGACGAGCGTCCGGCAAGGCCTGACTCCTGGAAAGCCGCGCCG AGAAATGGCTTTATGTTCGAACCGGAAGGATTAGACGAGGGTGTCGTCACCGTCGCTCAAAAGGCCGAAGAGGCG TCCCGAATGCCACCAAAAACCATCATCTATGACAATACTAGGATTCCGGAACCGTACGCTCCGGATCGACCTCCC TCGCCCACCCTATCCTCGATTCGGGACGCCATCGCGGGAAGGCCGCGCCCACAAGATCGGGACACTAGCGACGTT GGCGGGGGGGAGACGCCCAGAGTCAACGGCTACACGTTTGTCGACGACGATGATGACGAGCCAGTCTTTGCGGAC TCTCCGCCTGCCATTAGCCTGGGCCCAGGCGACGCACACAACCCCTTCAGGTTACAGCAGCTGAGGAAGCGGGAG TCGCTACACGAACGACTGGTGGAGCGGATAGCCAAAACCAACAAAGAGTCTTCTCGCCATGGGCTCAGCGGAAGG CCTGAGTTGCAGCACGTCCCAAAGTTCCCCAGCAGCCCTCGAAAAACCGGAGATTTCACACCAGCGGCACAGAGA CTGCTCAATAAAATGGGGACACCGAAAGGCAGGACGCCCGGCAGCCCCTTTGACCACTTTGCCACACCAGTCAAA CGACGGGGCTCGCGCTTGAAGTCTAGCACGAAGACGAAGACAGAACGGCACAATTAGCTCGGCCGACGAGCCCAC GGAAATGTACGACTACCGATTTTCACAAAGAATCCGATTAACTCATTGGGTAGGTGA |