© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|5350 |
| Gene name | |
| Location | scaffold_435:13347..15361 |
| Strand | + |
| Gene length (bp) | 2014 |
| Transcript length (bp) | 1962 |
| Coding sequence length (bp) | 1959 |
| Protein length (aa) | 653 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07719 | TPR_2 | Tetratricopeptide repeat | 3.6E-07 | 515 | 545 |
| PF00515 | TPR_1 | Tetratricopeptide repeat | 1.6E-07 | 515 | 546 |
| PF13414 | TPR_11 | TPR repeat | 1.4E-07 | 526 | 555 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 3.0E-03 | 361 | 393 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 2.3E-05 | 515 | 545 |
| PF13428 | TPR_14 | Tetratricopeptide repeat | 2.8E-05 | 515 | 554 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 4.1E-06 | 340 | 390 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 1.5E-04 | 523 | 557 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 2.2E-03 | 516 | 543 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99144|PEX5_YARLI | Peroxisomal targeting signal receptor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PAY32 PE=3 SV=1 | 1 | 653 | 1.0E-135 |
| sp|O74711|PEX5_CANAL | Peroxisomal targeting signal receptor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PEX5 PE=3 SV=2 | 1 | 653 | 4.0E-109 |
| sp|Q01495|PEX5_PICAN | Peroxisomal targeting signal receptor OS=Pichia angusta GN=PEX5 PE=1 SV=1 | 1 | 653 | 7.0E-107 |
| sp|P33292|PEX5_PICPA | Peroxisomal targeting signal receptor OS=Komagataella pastoris GN=PEX5 PE=3 SV=2 | 1 | 653 | 5.0E-106 |
| sp|Q6CT48|PEX5_KLULA | Peroxisomal targeting signal receptor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PEX5 PE=3 SV=1 | 6 | 653 | 2.0E-96 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99144|PEX5_YARLI | Peroxisomal targeting signal receptor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PAY32 PE=3 SV=1 | 1 | 653 | 1.0E-135 |
| sp|O74711|PEX5_CANAL | Peroxisomal targeting signal receptor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PEX5 PE=3 SV=2 | 1 | 653 | 4.0E-109 |
| sp|Q01495|PEX5_PICAN | Peroxisomal targeting signal receptor OS=Pichia angusta GN=PEX5 PE=1 SV=1 | 1 | 653 | 7.0E-107 |
| sp|P33292|PEX5_PICPA | Peroxisomal targeting signal receptor OS=Komagataella pastoris GN=PEX5 PE=3 SV=2 | 1 | 653 | 5.0E-106 |
| sp|Q6CT48|PEX5_KLULA | Peroxisomal targeting signal receptor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PEX5 PE=3 SV=1 | 6 | 653 | 2.0E-96 |
| sp|Q6BM14|PEX5_DEBHA | Peroxisomal targeting signal receptor OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PEX5 PE=3 SV=2 | 209 | 653 | 9.0E-95 |
| sp|Q6FM42|PEX5_CANGA | Peroxisomal targeting signal receptor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PEX5 PE=3 SV=1 | 4 | 653 | 1.0E-93 |
| sp|P35056|PEX5_YEAST | Peroxisomal targeting signal receptor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX5 PE=1 SV=1 | 4 | 653 | 1.0E-91 |
| sp|Q752X0|PEX5_ASHGO | Peroxisomal targeting signal receptor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PEX5 PE=3 SV=5 | 7 | 653 | 1.0E-90 |
| sp|Q5ZMQ9|PEX5_CHICK | Peroxisomal targeting signal 1 receptor OS=Gallus gallus GN=PEX5 PE=2 SV=1 | 208 | 634 | 6.0E-66 |
| sp|Q920N5|PEX5_CRIGR | Peroxisomal targeting signal 1 receptor OS=Cricetulus griseus GN=PEX5 PE=1 SV=1 | 314 | 578 | 2.0E-65 |
| sp|Q2M2R8|PEX5_RAT | Peroxisomal targeting signal 1 receptor OS=Rattus norvegicus GN=Pex5 PE=1 SV=2 | 314 | 578 | 2.0E-64 |
| sp|Q1RMV0|PEX5_BOVIN | Peroxisomal targeting signal 1 receptor OS=Bos taurus GN=PEX5 PE=2 SV=1 | 314 | 578 | 6.0E-64 |
| sp|P50542|PEX5_HUMAN | Peroxisomal targeting signal 1 receptor OS=Homo sapiens GN=PEX5 PE=1 SV=3 | 314 | 578 | 7.0E-64 |
| sp|O70525|PEX5_CAVPO | Peroxisomal targeting signal 1 receptor OS=Cavia porcellus GN=PEX5 PE=2 SV=1 | 314 | 578 | 1.0E-63 |
| sp|O09012|PEX5_MOUSE | Peroxisomal targeting signal 1 receptor OS=Mus musculus GN=Pex5 PE=1 SV=2 | 314 | 578 | 2.0E-63 |
| sp|Q8IYB4|PEX5R_HUMAN | PEX5-related protein OS=Homo sapiens GN=PEX5L PE=1 SV=2 | 314 | 578 | 6.0E-58 |
| sp|Q925N3|PEX5R_RAT | PEX5-related protein OS=Rattus norvegicus GN=Pex5l PE=1 SV=1 | 314 | 578 | 2.0E-57 |
| sp|Q8C437|PEX5R_MOUSE | PEX5-related protein OS=Mus musculus GN=Pex5l PE=1 SV=2 | 314 | 578 | 4.0E-57 |
| sp|Q54MD1|PEX5_DICDI | Peroxisomal targeting signal 1 receptor OS=Dictyostelium discoideum GN=pex5 PE=3 SV=1 | 324 | 653 | 7.0E-46 |
| sp|O94325|PEX5_SCHPO | Peroxisomal targeting signal receptor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pex5 PE=1 SV=1 | 307 | 651 | 1.0E-44 |
| sp|Q9FMA3|PEX5_ARATH | Peroxisome biogenesis protein 5 OS=Arabidopsis thaliana GN=PEX5 PE=1 SV=1 | 314 | 583 | 4.0E-38 |
| sp|Q04364|YMP8_YEAST | TPR repeat-containing protein YMR018W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR018W PE=1 SV=1 | 302 | 629 | 9.0E-31 |
| sp|O18158|OGT1_CAEEL | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase OS=Caenorhabditis elegans GN=ogt-1 PE=1 SV=2 | 335 | 644 | 6.0E-07 |
| sp|Q9M8Y0|SEC_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC OS=Arabidopsis thaliana GN=SEC PE=2 SV=1 | 337 | 554 | 2.0E-06 |
| sp|Q96301|SPY_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana GN=SPY PE=1 SV=1 | 349 | 560 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5350 MSFMGGAECSSSGNPLSQFQKHVQDDKTLQRDRLIGRGPGGQLGGFRSQAAGAPQDEMLEGFVNGAPNLQQDFPI HGGPAPQLNVATPSSMRASSASPSWARDFNGQAGAESAFKPPPGAHFSADEFARFNMMNTQASSSRSSPMPSQMA PQRPMLGVGMMMNRGMGYGMAGPPMFQPMYQNYEQQQQQPVEDKGKGKAQMVELDDSQWEEQFAKLELQDKEEAA AERQREADEATAAERELDEMDRAMQSETNEFGDFESIWKGIQAETAAARSAVDDGQYLDLDKEWNSDMLQDLNGL GDWGRFSDPVVENYLFEEENMFRKEHNAFERGVRVMKEGGNLSLAALAFEAAVQQDPSHVEAWVWLGQAQAQNEK ETAAIRAMEEALKLDGNHLDALMGLAVSYTNEGYDSTAYRTLERWLSVKYPTILDPKDLHPRSDMGFSDRQLLHD KVTGLFIKAAQLSPDGERMDPDVQVGLGVLFYGAEEYDKAVDCFQAALQSSELGSSNQQQQVHLLWNRLGATLAN SGRSEEAIAAYEQALALAPNFVRARYNLGVSCININCHHEAACHFLAALEMHKSIEKAGRAQAHEMLGATDETPG LVDEALDRMSAQNRSSTLYDTLRRVFTQMGRRDLAEKTLPGVDPDLFRAEFDF |
| Coding | >Ophio5|5350 ATGTCGTTCATGGGCGGCGCCGAGTGCTCCTCGTCCGGAAACCCGCTGAGCCAGTTCCAGAAGCACGTGCAGGAT GACAAGACGCTGCAGCGAGACCGGCTCATCGGGAGGGGACCTGGGGGTCAGCTCGGCGGCTTTCGAAGTCAGGCT GCCGGCGCTCCGCAGGATGAGATGCTCGAGGGCTTCGTCAATGGCGCGCCGAATCTGCAGCAGGATTTCCCCATA CATGGAGGTCCTGCGCCGCAACTCAACGTGGCGACGCCGTCGTCGATGCGTGCCAGCTCGGCCTCCCCCTCGTGG GCGCGCGACTTCAACGGCCAGGCGGGCGCCGAATCGGCCTTTAAGCCGCCGCCCGGGGCCCATTTCAGCGCCGAC GAGTTCGCCAGGTTCAACATGATGAACACGCAGGCGTCGTCGTCCCGGTCCAGCCCGATGCCTAGCCAAATGGCT CCCCAGCGGCCCATGCTGGGCGTCGGCATGATGATGAATAGGGGCATGGGATACGGCATGGCGGGCCCGCCCATG TTCCAGCCCATGTACCAGAACTACGAGCAGCAGCAGCAGCAGCCGGTCGAGGACAAGGGAAAGGGAAAGGCTCAG ATGGTGGAGCTCGACGACAGCCAGTGGGAAGAGCAGTTCGCCAAGCTGGAGCTGCAGGACAAGGAGGAGGCAGCG GCGGAGAGGCAACGAGAAGCAGACGAGGCGACGGCGGCGGAACGGGAGCTCGACGAGATGGACCGGGCCATGCAG TCGGAGACGAACGAGTTTGGCGACTTTGAGTCGATATGGAAGGGGATTCAGGCGGAGACGGCGGCTGCCAGGTCG GCCGTCGACGACGGACAGTATCTCGATCTGGACAAGGAGTGGAACAGCGACATGCTGCAGGACCTCAACGGGTTG GGAGACTGGGGCCGGTTCAGCGACCCGGTGGTGGAAAACTACCTGTTCGAGGAGGAGAACATGTTCCGCAAGGAG CACAACGCGTTCGAGCGGGGCGTGCGGGTGATGAAGGAGGGCGGCAACCTATCGCTGGCGGCGCTGGCGTTCGAG GCGGCGGTGCAGCAGGACCCGAGCCACGTCGAGGCCTGGGTATGGCTGGGTCAGGCGCAAGCGCAGAACGAAAAG GAGACGGCGGCGATTCGGGCCATGGAGGAGGCGCTCAAACTCGACGGCAACCACCTGGACGCGCTCATGGGCCTG GCCGTGTCGTACACCAACGAAGGCTACGACAGCACGGCCTACCGGACACTGGAGCGGTGGCTGTCGGTCAAGTAC CCGACCATCCTGGACCCCAAGGACCTGCACCCGCGGTCCGACATGGGCTTCTCGGACCGGCAGCTGCTGCACGAC AAGGTGACGGGCCTCTTCATCAAGGCGGCGCAGCTGAGCCCGGACGGCGAGCGCATGGACCCGGACGTCCAGGTC GGCCTGGGCGTGCTCTTCTACGGCGCCGAGGAGTATGACAAGGCCGTCGACTGCTTCCAGGCGGCGCTTCAGTCT TCGGAGCTGGGGAGCTCGAACCAGCAGCAACAGGTTCACCTGCTGTGGAACCGGCTGGGCGCGACGCTGGCCAAC AGCGGGCGGTCAGAAGAGGCCATCGCCGCGTACGAGCAGGCGCTGGCGCTGGCGCCCAACTTTGTCCGGGCGAGA TACAACCTGGGGGTGAGCTGCATCAACATCAACTGTCACCACGAGGCCGCCTGCCACTTCCTGGCGGCGCTCGAG ATGCACAAGTCGATCGAGAAGGCGGGCCGGGCCCAAGCGCACGAGATGCTGGGGGCCACGGACGAGACGCCGGGG CTGGTGGACGAGGCTCTCGATCGCATGTCGGCTCAGAATCGCAGCAGCACGCTCTACGACACGCTGCGCCGCGTC TTTACCCAGATGGGCCGTCGCGACCTCGCGGAGAAGACACTACCGGGTGTCGACCCGGATCTGTTTCGGGCCGAG TTTGACTTT |
| Transcript | >Ophio5|5350 ATGTCGTTCATGGGCGGCGCCGAGTGCTCCTCGTCCGGAAACCCGCTGAGCCAGTTCCAGAAGCACGTGCAGGAT GACAAGACGCTGCAGCGAGACCGGCTCATCGGGAGGGGACCTGGGGGTCAGCTCGGCGGCTTTCGAAGTCAGGCT GCCGGCGCTCCGCAGGATGAGATGCTCGAGGGCTTCGTCAATGGCGCGCCGAATCTGCAGCAGGATTTCCCCATA CATGGAGGTCCTGCGCCGCAACTCAACGTGGCGACGCCGTCGTCGATGCGTGCCAGCTCGGCCTCCCCCTCGTGG GCGCGCGACTTCAACGGCCAGGCGGGCGCCGAATCGGCCTTTAAGCCGCCGCCCGGGGCCCATTTCAGCGCCGAC GAGTTCGCCAGGTTCAACATGATGAACACGCAGGCGTCGTCGTCCCGGTCCAGCCCGATGCCTAGCCAAATGGCT CCCCAGCGGCCCATGCTGGGCGTCGGCATGATGATGAATAGGGGCATGGGATACGGCATGGCGGGCCCGCCCATG TTCCAGCCCATGTACCAGAACTACGAGCAGCAGCAGCAGCAGCCGGTCGAGGACAAGGGAAAGGGAAAGGCTCAG ATGGTGGAGCTCGACGACAGCCAGTGGGAAGAGCAGTTCGCCAAGCTGGAGCTGCAGGACAAGGAGGAGGCAGCG GCGGAGAGGCAACGAGAAGCAGACGAGGCGACGGCGGCGGAACGGGAGCTCGACGAGATGGACCGGGCCATGCAG TCGGAGACGAACGAGTTTGGCGACTTTGAGTCGATATGGAAGGGGATTCAGGCGGAGACGGCGGCTGCCAGGTCG GCCGTCGACGACGGACAGTATCTCGATCTGGACAAGGAGTGGAACAGCGACATGCTGCAGGACCTCAACGGGTTG GGAGACTGGGGCCGGTTCAGCGACCCGGTGGTGGAAAACTACCTGTTCGAGGAGGAGAACATGTTCCGCAAGGAG CACAACGCGTTCGAGCGGGGCGTGCGGGTGATGAAGGAGGGCGGCAACCTATCGCTGGCGGCGCTGGCGTTCGAG GCGGCGGTGCAGCAGGACCCGAGCCACGTCGAGGCCTGGGTATGGCTGGGTCAGGCGCAAGCGCAGAACGAAAAG GAGACGGCGGCGATTCGGGCCATGGAGGAGGCGCTCAAACTCGACGGCAACCACCTGGACGCGCTCATGGGCCTG GCCGTGTCGTACACCAACGAAGGCTACGACAGCACGGCCTACCGGACACTGGAGCGGTGGCTGTCGGTCAAGTAC CCGACCATCCTGGACCCCAAGGACCTGCACCCGCGGTCCGACATGGGCTTCTCGGACCGGCAGCTGCTGCACGAC AAGGTGACGGGCCTCTTCATCAAGGCGGCGCAGCTGAGCCCGGACGGCGAGCGCATGGACCCGGACGTCCAGGTC GGCCTGGGCGTGCTCTTCTACGGCGCCGAGGAGTATGACAAGGCCGTCGACTGCTTCCAGGCGGCGCTTCAGTCT TCGGAGCTGGGGAGCTCGAACCAGCAGCAACAGGTTCACCTGCTGTGGAACCGGCTGGGCGCGACGCTGGCCAAC AGCGGGCGGTCAGAAGAGGCCATCGCCGCGTACGAGCAGGCGCTGGCGCTGGCGCCCAACTTTGTCCGGGCGAGA TACAACCTGGGGGTGAGCTGCATCAACATCAACTGTCACCACGAGGCCGCCTGCCACTTCCTGGCGGCGCTCGAG ATGCACAAGTCGATCGAGAAGGCGGGCCGGGCCCAAGCGCACGAGATGCTGGGGGCCACGGACGAGACGCCGGGG CTGGTGGACGAGGCTCTCGATCGCATGTCGGCTCAGAATCGCAGCAGCACGCTCTACGACACGCTGCGCCGCGTC TTTACCCAGATGGGCCGTCGCGACCTCGCGGAGAAGACACTACCGGGTGTCGACCCGGATCTGTTTCGGGCCGAG TTTGACTTTTGA |
| Gene | >Ophio5|5350 ATGTCGTTCATGGGCGGCGCCGAGTGCTCCTCGTCCGGAAACCCGCTGAGCCAGTTCCAGAAGCACGTGCAGGAT GACAAGACGCTGCAGCGAGACCGGCTCATCGGGAGGGGACCTGGGGGTCAGCTCGGCGGCTTTCGAAGTCAGGCT GCCGGCGCTCCGCAGGATGAGGTATGGTAAAGTGGCCCCCCCCTTCATCGCCTCGGCTAACTGTTGCCTGCAGAT GCTCGAGGGCTTCGTCAATGGCGCGCCGAATCTGCAGCAGGATTTCCCCATACATGGAGGTCCTGCGCCGCAACT CAACGTGGCGACGCCGTCGTCGATGCGTGCCAGCTCGGCCTCCCCCTCGTGGGCGCGCGACTTCAACGGCCAGGC GGGCGCCGAATCGGCCTTTAAGCCGCCGCCCGGGGCCCATTTCAGCGCCGACGAGTTCGCCAGGTTCAACATGAT GAACACGCAGGCGTCGTCGTCCCGGTCCAGCCCGATGCCTAGCCAAATGGCTCCCCAGCGGCCCATGCTGGGCGT CGGCATGATGATGAATAGGGGCATGGGATACGGCATGGCGGGCCCGCCCATGTTCCAGCCCATGTACCAGAACTA CGAGCAGCAGCAGCAGCAGCCGGTCGAGGACAAGGGAAAGGGAAAGGCTCAGATGGTGGAGCTCGACGACAGCCA GTGGGAAGAGCAGTTCGCCAAGCTGGAGCTGCAGGACAAGGAGGAGGCAGCGGCGGAGAGGCAACGAGAAGCAGA CGAGGCGACGGCGGCGGAACGGGAGCTCGACGAGATGGACCGGGCCATGCAGTCGGAGACGAACGAGTTTGGCGA CTTTGAGTCGATATGGAAGGGGATTCAGGCGGAGACGGCGGCTGCCAGGTCGGCCGTCGACGACGGACAGTATCT CGATCTGGACAAGGAGTGGAACAGCGACATGCTGCAGGACCTCAACGGGTTGGGAGACTGGGGCCGGTTCAGCGA CCCGGTGGTGGAAAACTACCTGTTCGAGGAGGAGAACATGTTCCGCAAGGAGCACAACGCGTTCGAGCGGGGCGT GCGGGTGATGAAGGAGGGCGGCAACCTATCGCTGGCGGCGCTGGCGTTCGAGGCGGCGGTGCAGCAGGACCCGAG CCACGTCGAGGCCTGGGTATGGCTGGGTCAGGCGCAAGCGCAGAACGAAAAGGAGACGGCGGCGATTCGGGCCAT GGAGGAGGCGCTCAAACTCGACGGCAACCACCTGGACGCGCTCATGGGCCTGGCCGTGTCGTACACCAACGAAGG CTACGACAGCACGGCCTACCGGACACTGGAGCGGTGGCTGTCGGTCAAGTACCCGACCATCCTGGACCCCAAGGA CCTGCACCCGCGGTCCGACATGGGCTTCTCGGACCGGCAGCTGCTGCACGACAAGGTGACGGGCCTCTTCATCAA GGCGGCGCAGCTGAGCCCGGACGGCGAGCGCATGGACCCGGACGTCCAGGTCGGCCTGGGCGTGCTCTTCTACGG CGCCGAGGAGTATGACAAGGCCGTCGACTGCTTCCAGGCGGCGCTTCAGTCTTCGGAGCTGGGGAGCTCGAACCA GCAGCAACAGGTTCACCTGCTGTGGAACCGGCTGGGCGCGACGCTGGCCAACAGCGGGCGGTCAGAAGAGGCCAT CGCCGCGTACGAGCAGGCGCTGGCGCTGGCGCCCAACTTTGTCCGGGCGAGATACAACCTGGGGGTGAGCTGCAT CAACATCAACTGTCACCACGAGGCCGCCTGCCACTTCCTGGCGGCGCTCGAGATGCACAAGTCGATCGAGAAGGC GGGCCGGGCCCAAGCGCACGAGATGCTGGGGGCCACGGACGAGACGCCGGGGCTGGTGGACGAGGCTCTCGATCG CATGTCGGCTCAGAATCGCAGCAGCACGCTCTACGACACGCTGCGCCGCGTCTTTACCCAGATGGGCCGTCGCGA CCTCGCGGAGAAGACACTACCGGGTGTCGACCCGGATCTGTTTCGGGCCGAGTTTGACTTTTGA |